mRNA_H-paniculata_contig5985.13640.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A6H5KZH8_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZH8_9PHAE) HSP 1 Score: 211 bits (537), Expect = 2.440e-66 Identity = 102/164 (62.20%), Postives = 134/164 (81.71%), Query Frame = 1
Query: 13 LLINDEFAMGVEVMLYSLREH---SKIRRAHVVLVAPDVSELKRRSLKAVADHIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
++ +D+F +G EV+L+SLREH S R A VV+V VS+LKR++LK V+D +IEVEPIA+P ++ + HVP W VGYT LRVWGL Q+++VVYIDADAL++ +DELFDR+V FAAAPD+FPPD+FNAGVMV+ PS +L+DM+SKVEELPS+DGGDTG +N
Sbjct: 1 MVTSDDFVIGAEVLLHSLREHCGGSTRRPALVVMVTSGVSQLKRQALKVVSDEVIEVEPIAVPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMVDIDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELPSYDGGDTGFLN 164
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A835YMF4_9STRA (Glycosyltransferase, family GT8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMF4_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.150e-53 Identity = 86/167 (51.50%), Postives = 121/167 (72.46%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAH-VVLVAPDVSELKRRSLKAVADHIIEVEPIAMPARQESS-HVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A+ TL+ DE+A+G EV+L SL+E S H VVL+ P+VS R L+ V ++EV P++M + +S HV W +VGYT LR+WGL QY K+ YIDAD L++ V+++F RDV FAAAPD+FPPD+FNAGV+++ P++A+ DM+ K+ ELPS+DGGDTG +N
Sbjct: 9 AYATLVTTDEYAIGAEVLLQSLKEFSSNAAIHRVVLITPNVSTSARARLQRVGCEVLEVMPLSMASCPSASDHVSGWAEVGYTKLRIWGLVQYTKIFYIDADCLVVGAVEDVFKRDVDFAAAPDVFPPDKFNAGVLLVKPNEAIFQDMMRKIPELPSYDGGDTGFLN 175
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A7S2Y0F1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F1_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.020e-50 Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVV-LVAPDVSELKRRSLKAVADHIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
AFVT+L ND F MGVEV+L+SL + S VV LV P VS+ R L I ++EPI P + +HV W GY LR+WGL +Y +VVY+DAD L+++ + ELF+R+ FAAAPD+FPPD+FNAGV+VL P QA+ +DMLSK+ LPS+DGGDTG +N
Sbjct: 2 AFVTILTNDSFKMGVEVLLFSLEQTSMQDNVDVVILVTPQVSQFTRNQLVRSNRRIKQIEPIENPNAE--AHVQGWVDSGYAKLRLWGLLEYSRVVYLDADCLVMEPIHELFEREADFAAAPDVFPPDKFNAGVLVLKPDQAVYEDMLSKLNALPSYDGGDTGFLN 165
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: W7TND6_9STRA (Unidentified vitellogenin-linked transcript family member (Uvt-5) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TND6_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.160e-49 Identity = 90/174 (51.72%), Postives = 120/174 (68.97%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLR-------EHSKIRRAHVVLVAPDVSELKRRSLKAVADHIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEE--LPSHDGGDTGEIN 495
AFVTLL D F G +V+L+SLR + IR VVLV P++SE R+ L+ D ++ VEPIA P E+SHV W G+T L++WGLTQ+++VVY+DAD L+++ + ELF DV FAAAPDIFPPDRFNAGVM++ P+ + +DML V+ LPS+DGGDTG +N
Sbjct: 25 AFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYA-ENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLN 197
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: F0Y364_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y364_AURAN) HSP 1 Score: 154 bits (390), Expect = 2.070e-44 Identity = 84/170 (49.41%), Postives = 113/170 (66.47%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVVLVAPDVSELKRRSLKAVADHIIEVEPIAMPARQESSHVPM-----WEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A+ T++ ND +A G +L SLR S+ + +VLV DVSE RR L+ +A +++VEPI P H P+ W + GYT L +WGLT+Y K+VY+DADA++++ VDELF DV+FAAAPDIFPPD+FN+GVMVL PS+ D ML + SHDGGD G +N
Sbjct: 2 AYATVITNDGYAPGALALLQSLRA-SRSAKPRLVLVTSDVSERSRRLLRRLAT-VVDVEPIPNP------HTPLDGKECWARCGYTKLALWGLTEYTKLVYVDADAVVLENVDELFALDVAFAAAPDIFPPDKFNSGVMVLAPSKETFDAMLKVAPDARSHDGGDGGFLN 163
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A7S1DVH0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVH0_HEMAN) HSP 1 Score: 145 bits (367), Expect = 3.670e-40 Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVVLVAPDVSELKRRSLKAVAD-HIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A+VT++ + + G VM +SL++ VV + + L A I+ VEPI P + S V W+ VGYT L VWGL Y KV+YIDAD LI V+ELF+R+V+FAAAPD+FPPDRFNAGVM++ P + +L +MLSKVEEL S+D GDTG +N
Sbjct: 31 AYVTMVTTEGYVQGAIVMNHSLQQSGNSGGRDVVCIVTRTLPVSSTDLLRKAGMKIVVVEPIGAP---KPSGVSEWDSVGYTKLNVWGLDMYDKVLYIDADCLITGTVEELFERNVTFAAAPDVFPPDRFNAGVMLVKPDKKVLGEMLSKVEELKSYDDGDTGFLN 193
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A7S1H016_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H016_HEMAN) HSP 1 Score: 145 bits (367), Expect = 1.180e-39 Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVVLVAPDVSELKRRSLKAVAD-HIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A+VT++ + + G VM +SL++ VV + + L A I+ VEPI P + S V W+ VGYT L VWGL Y KV+YIDAD LI V+ELF+R+V+FAAAPD+FPPDRFNAGVM++ P + +L +MLSKVEEL S+D GDTG +N
Sbjct: 81 AYVTMVTTEGYVQGAIVMNHSLQQSGNSGGRDVVCIVTRTLPVSSTDLLRKAGMKIVVVEPIGAP---KPSGVSEWDSVGYTKLNVWGLDMYDKVLYIDADCLITGTVEELFERNVTFAAAPDVFPPDRFNAGVMLVKPDKKVLGEMLSKVEELKSYDDGDTGFLN 243
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A7S3NMD1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMD1_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.860e-39 Identity = 76/166 (45.78%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVVLVAPDVSELKRRSLKAVADHIIEVEPIAMP-ARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A+ TL+ +++F G EV+L+SL++ R +V+V D+ + R+ L +A I EVEPIA P RQ++S W+ GYT LR+W L +Y+ +VYIDADA+++ +DELF + FAAAPD+FPPD+FNAGV+VL P + M+ V +HDGGDTG +N
Sbjct: 16 AYATLITSEDFVDGGEVLLHSLKKTGTDRDL-IVVVTSDICKTSRQRLSRIAQRICEVEPIANPFERQDAS----WKGSGYTKLRLWTLVEYRCIVYIDADAVVLSNIDELFFLETHFAAAPDLFPPDKFNAGVLVLRPDLDVFQQMMETVPLAKTHDGGDTGFLN 176
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A7S4N210_GUITH (Hypothetical protein n=4 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N210_GUITH) HSP 1 Score: 142 bits (358), Expect = 5.180e-39 Identity = 70/167 (41.92%), Postives = 112/167 (67.07%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSL--REHSKIRRAHVVLVAPDVSELKRRSLKAVADHIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFDRDVSFAAAPDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A++T++ +D + MG V+ +S+ + +R +V +VS R++L+ II VE I+ +ESS + W++ GYT L +W LT++ K+VY+DAD L+++ +D+LF R+ FAAAPD FPPDRFNAGV+V+ PS + +DM+S++ + S+DGGDTG +N
Sbjct: 12 AYITMVTSDSYLMGALVLAHSILKTQDKSNQRPICCMVTDEVSADSRKALEQAGLRIIMVESISS---KESSGIDAWDQSGYTKLNIWKLTEFSKLVYVDADCLVMESIDDLFSRETRFAAAPDTFPPDRFNAGVLVVEPSLEVFEDMISRIGVMHSYDGGDTGFLN 175
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Match: A0A0G4GUF1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GUF1_VITBC) HSP 1 Score: 142 bits (357), Expect = 6.950e-39 Identity = 81/169 (47.93%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 1 AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVVLVAPDVSE--LKRRSLKAVADHIIEVEPIAMPARQESSHVPMWEKVGYTSLRVWGLTQYKKVVYIDADALIIDCVDELFD-RDVSFAA-APDIFPPDRFNAGVMVLTPSQALLDDMLSKVEELPSHDGGDTGEIN 495
A++TLL +D FA+GVE + +SLR+ + +VLV P VSE KR S + + + V+ IA P +E H P W G+T L VW LT++++VVYIDAD +++ +D LFD VS A APD+FPPDRFNAGVMV+ PS A+ +D+L+K L S+D GDTG +N
Sbjct: 15 AYITLLTSDSFAIGVETLAFSLRK-TGTPHPFIVLVGPQVSERTFKRLSERKGVEDVRRVDGIANPHAEEGCHEPGWVNSGFTKLHVWSLTEFQRVVYIDADCIVMRKIDCLFDPAAVSCPAFAPDVFPPDRFNAGVMVIEPSLAVYEDLLAKRTVLRSYDRGDTGFLN 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5985.13640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5985.13640.1 >prot_H-paniculata_contig5985.13640.1 ID=prot_H-paniculata_contig5985.13640.1|Name=mRNA_H-paniculata_contig5985.13640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp AFVTLLINDEFAMGVEVMLYSLREHSKIRRAHVVLVAPDVSELKRRSLKAback to top mRNA from alignment at H-paniculata_contig5985:95..3115- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5985.13640.1 ID=mRNA_H-paniculata_contig5985.13640.1|Name=mRNA_H-paniculata_contig5985.13640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3021bp|location=Sequence derived from alignment at H-paniculata_contig5985:95..3115- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5985:95..3115- >mRNA_H-paniculata_contig5985.13640.1 ID=mRNA_H-paniculata_contig5985.13640.1|Name=mRNA_H-paniculata_contig5985.13640.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at H-paniculata_contig5985:95..3115- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |