mRNA_H-paniculata_contig59842.13639.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig59842.13639.1
Unique NamemRNA_H-paniculata_contig59842.13639.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: D7FJG3_ECTSI (Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.810e-19
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   31 QQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            ++RGWGEAMLSYLER+A+A SVKH+FVLS+ TMQWFVERGF E+ VSDLP ER
Sbjct:  408 RKRGWGEAMLSYLERVALASSVKHLFVLSTVTMQWFVERGFRESQVSDLPPER 460          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A6H5KIW4_9PHAE (Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.950e-19
Identity = 40/53 (75.47%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   31 QQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            ++RGWGEAMLSYLER+A+A SV+H+FVLS+ TMQWFVERGF E+ VSDLP ER
Sbjct:  613 RKRGWGEAMLSYLERVALASSVQHLFVLSTVTMQWFVERGFRESQVSDLPPER 665          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: F0Y6U0_AURAN (Amino-acid N-acetyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6U0_AURAN)

HSP 1 Score: 76.6 bits (187), Expect = 7.970e-15
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 1
Query:    1 CIITPPLLSRQQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            C++  P   RQ +  G+A+LSYLER+AIA  VK +F LS++TMQWFVERGF EA+++ LP+ER
Sbjct:  476 CLVVAPKYRRQSK--GDALLSYLERVAIASGVKKLFALSTKTMQWFVERGFIEATLASLPQER 536          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A7R9ZMC4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZMC4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.980e-13
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 1
Query:   31 QQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            + RG G+AML YLERL +     +VFVLS++TM+WF+ERGF+E  VS LP  R
Sbjct:   30 RSRGHGDAMLGYLERLCLQKGASYVFVLSTQTMEWFIERGFDEVDVSRLPPSR 82          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: F0YM76_AURAN (Putative amino acid N-acetyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YM76_AURAN)

HSP 1 Score: 72.4 bits (176), Expect = 2.460e-13
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1
Query:    1 CIITPPLLSRQQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            C++      RQ +  G+A+LSYLER+AIA  VK +F LS++TMQWFVERGF+E ++  LP+ER
Sbjct:  443 CLVVASKYRRQSK--GDALLSYLERVAIASGVKQLFALSTKTMQWFVERGFDEVTLDLLPQER 503          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A7S3WI97_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WI97_EMIHU)

HSP 1 Score: 68.6 bits (166), Expect = 3.560e-13
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
Query:    1 CIITPPLLSRQQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            C++  P   ++ R  G++MLS+LER AI+  V  +F LS+RTMQWF ERGF E  VS+LP+ R
Sbjct:   36 CLVVSPRYRKEGR--GDSMLSFLERTAISAGVSRLFALSTRTMQWFTERGFVEVPVSELPERR 96          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A7S3NMT5_9STRA (Amino-acid N-acetyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMT5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.630e-13
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1
Query:   46 GEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            G+A+LSYLER+AIA  + H+F LS+RTMQWF+ERGFEE     LP +R
Sbjct:  490 GDALLSYLERVAIANKITHLFALSTRTMQWFIERGFEEVDFESLPSDR 537          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A7S3SN10_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SN10_EMIHU)

HSP 1 Score: 68.6 bits (166), Expect = 1.000e-12
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1
Query:    1 CIITPPLLSRQQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            C++  P   ++ R  G++MLS+LER AI+  V  +F LS+RTMQWF ERGF E  VS+LP+ R
Sbjct:   88 CLVVSPRYRKEGR--GDSMLSFLERTAISAGVSRLFALSTRTMQWFTERGFVEVPVSELPERR 148          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A7S1F7S0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F7S0_NOCSC)

HSP 1 Score: 68.2 bits (165), Expect = 1.200e-12
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = 1
Query:   37 RGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            RG G+ ML+YLER+A+   + ++FVLS+++MQWF+ERGFEE  +  LP++R
Sbjct:   99 RGRGDLMLTYLERIAVQAGITNIFVLSTQSMQWFMERGFEEVGIDSLPRQR 149          
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Match: A0A7R9ZL53_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZL53_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.580e-12
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 1
Query:   31 QQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERGFEEASVSDLPKER 189
            + RG G+AML YLERL +     +VFVLS++TM+WF+ERGF+E  VS LP  R
Sbjct:  136 RSRGHGDAMLGYLERLCLQKGASYVFVLSTQTMEWFIERGFDEVDVSRLPPSR 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59842.13639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJG3_ECTSI1.810e-1977.36Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus ... [more]
A0A6H5KIW4_9PHAE6.950e-1975.47Amino-acid N-acetyltransferase n=1 Tax=Ectocarpus ... [more]
F0Y6U0_AURAN7.970e-1557.14Amino-acid N-acetyltransferase n=1 Tax=Aureococcus... [more]
A0A7R9ZMC4_9STRA1.980e-1356.60Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
F0YM76_AURAN2.460e-1353.97Putative amino acid N-acetyltransferase n=1 Tax=Au... [more]
A0A7S3WI97_EMIHU3.560e-1350.79Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3NMT5_9STRA8.630e-1362.50Amino-acid N-acetyltransferase n=1 Tax=Aureoumbra ... [more]
A0A7S3SN10_EMIHU1.000e-1250.79Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S1F7S0_NOCSC1.200e-1252.94Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7R9ZL53_9STRA1.580e-1256.60Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59842contigH-paniculata_contig59842:366..557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.5
Seed ortholog evalue3.1e-16
Seed eggNOG ortholog2880.D7FJG3
Preferred nameNAGS1
KEGG rclassRC00004,RC00064
KEGG koko:K14682
KEGG ReactionR00259
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acetyl-CoA:L-glutamate N-acetyltransferase activity
EggNOG OGsCOG0548@1,KOG2436@2759
EC2.3.1.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size192
Cds size192
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930660.8848279-CDS-H-paniculata_contig59842:365..5571622930660.8848279-CDS-H-paniculata_contig59842:365..557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig59842 366..557 -
1691481394.1727107-CDS-H-paniculata_contig59842:365..5571691481394.1727107-CDS-H-paniculata_contig59842:365..557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig59842 366..557 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59842.13639.1prot_H-paniculata_contig59842.13639.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig59842 366..557 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig59842.13639.1

>prot_H-paniculata_contig59842.13639.1 ID=prot_H-paniculata_contig59842.13639.1|Name=mRNA_H-paniculata_contig59842.13639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
CIITPPLLSRQQRGWGEAMLSYLERLAIAYSVKHVFVLSSRTMQWFVERG
FEEASVSDLPKER*
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mRNA from alignment at H-paniculata_contig59842:366..557-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig59842.13639.1 ID=mRNA_H-paniculata_contig59842.13639.1|Name=mRNA_H-paniculata_contig59842.13639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=192bp|location=Sequence derived from alignment at H-paniculata_contig59842:366..557- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTATTATTACCCCTCCCCTCCTCTCCCGTCAACAGCGAGGATGGGGAGA GGCGATGCTGAGCTATCTGGAACGCCTAGCGATTGCTTACTCGGTGAAGC ACGTGTTCGTGCTGTCGAGCAGGACAATGCAGTGGTTTGTAGAGAGAGGG TTCGAGGAGGCTAGCGTATCAGATCTTCCAAAAGAGAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig59842:366..557-

>mRNA_H-paniculata_contig59842.13639.1 ID=mRNA_H-paniculata_contig59842.13639.1|Name=mRNA_H-paniculata_contig59842.13639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=384bp|location=Sequence derived from alignment at H-paniculata_contig59842:366..557- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTATTATTACCCCTCCCCTCCTCTCCCGTCAACAGCGAGGATGGGGAGA
GGCGATGCTGAGCTATCTGGAACGCCTAGCGATTGCTTACTCGGTGAAGC
ACGTGTTCGTGCTGTCGAGCAGGACAATGCAGTGGTTTGTAGAGAGAGGG
TTCGAGGAGGCTAGCGTATCAGATCTTCCAAAAGAGAGGTAATGTATTAT
TACCCCTCCCCTCCTCTCCCGTCAACAGCGAGGATGGGGAGAGGCGATGC
TGAGCTATCTGGAACGCCTAGCGATTGCTTACTCGGTGAAGCACGTGTTC
GTGCTGTCGAGCAGGACAATGCAGTGGTTTGTAGAGAGAGGGTTCGAGGA
GGCTAGCGTATCAGATCTTCCAAAAGAGAGGTAA
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