prot_H-paniculata_contig598.13631.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig598.13631.1
Unique Nameprot_H-paniculata_contig598.13631.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length978
Homology
BLAST of mRNA_H-paniculata_contig598.13631.1 vs. uniprot
Match: A0A6H5KXY0_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXY0_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.090e-39
Identity = 243/735 (33.06%), Postives = 298/735 (40.54%), Query Frame = 0
Query:  107 PPLPRGWGELRTGDGRSYYVYYPTGAVQWQRPAPEPKTVTDDVD--GSQPEQQSRSDNDTQEL--------------------GGDGSGGGEGGEEGPLGGESEMSDAELNIDATGHGGTQRSMTGSGGVANAGVTRSGIEDDGQTAQPQTNRITGAPYPSAPWGQRSSL-AADTSDLSSSQRSLPQPPTEADPKWPTPPSSPPFQAVSQQQQQQRLPDRSSEF---QPWGGGDSTFASTFPPHAPEQSQGLQEGSFDASGSRPPIWGIDSGRQSIEQLPEQFPTDKDAPWGIKAGQQQQFPAANDVASSAATTQTWEQGQPAEGNDSLGAEGLGAPAGTSTMPTDSSGSDCGSWGAAEGLAAEQGQEKGSGSGASKFIADPWLGGGREQTQTQDRAGQEQGVPRAEVGAGTNGGLAPSGEGASSHWSEQERPIPYPASYVQQQPQVRESPQGSFNGASPSQQRQQQMEPMYQRSNKPESWGTDAEPRGPGRTSHGEQGQHPRLSR---GPQNGPPQDWERASSPPSMDHGQDSDWRASASQ-GPGAKEYEPPPGWVEARYAGQGQPRMGEQGQQHEGYYEQDGGYYQGPQGRDQWDSRENAMDEYASFPVGSRALVRHSSSAPGSITEIREQQGLHLVKGAWARILVGTGKTRAVLHSAKERATGAASTASYKIKNTMGTMTSRVADALEDDPNGMIGPYGQPPQNYYSGS-VGPGDDRRPNPRPYRENGLAGY 810
            PPLP GWGELRTGDGR YYVYYPTGAVQW+RP P P   +D  D  G Q E+ S +                           GG  +G GE   E P  GESEMSDAE  ID T   G + S+TG      AG         G  A P T    G P   +P   R  L  A   ++++S       P+ A P+                  + RLP     F   Q  G G  T                         +  P+ G   G++      E  P D   PWG+  G  QQ P+     S          G P   N  + A+    PA                WG   G A+  G   GS +  +    DP  G  R+Q                       GG    G   S  WS         AS  QQQ        G+  GA P  +R   + P  Q                           HP  ++   G +    Q W            Q +   A AS  G G     PP          Q QP  G+ G    GYY ++ GYYQGP G +   SR+    EY  FP GSRALV ++  AP    E++EQ GL LVKGAWARILVG  KTRA LH AKE+A  AASTA+YKIKNTMG++TSRVAD LE DP G+ GPYGQPPQ+YY    +G G  ++ +PR ++     GY
Sbjct:   24 PPLPAGWGELRTGDGRPYYVYYPTGAVQWERPKP-PSADSDGRDEAGQQREEGSSAARXXXXXXXXXXXXXXXXXXXXXXXXXGGAVAGYGE---EDPYRGESEMSDAEREID-TATSGARSSVTGDADSPAAG--------GGAQAPPST--YPGQP---SPMDSRHVLQGAAGKEVTASAY-----PSSARPEG----------------NEGRLPSPDDPFRQQQGSGPGGVTGXXXXXXXXXXXXXXXXXXXXXXKAAASPLSGERIGQEGSGVGGE--PPD---PWGM--GGDQQAPSQPQQPS----------GTPP--NPFIQADQNPPPA----------------WGEDRGEASAGG---GSLTAPAASSVDPMRGSTRDQP----------------------GGRNEHGSPLSDAWS---------ASRQQQQ--------GAPPGAEPYDRRPAGVSPAQQ---------------------------HPGYNQQQPGDEAAEGQSWGGGXXXXXXXXXQPATASACASXXGLGQXXXXPP--------FQQQQPGRGDYG----GYYGRNDGYYQGPPGGN-GGSRQQGNAEYGGFPAGSRALVPNNGGAPRGGLEVKEQ-GLQLVKGAWARILVGKDKTRAALHDAKEKAGVAASTATYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQDYYGEPRMGAGGGQQQHPRSWQGAPQNGY 601          
BLAST of mRNA_H-paniculata_contig598.13631.1 vs. uniprot
Match: D8LJY1_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY1_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 3.630e-33
Identity = 88/159 (55.35%), Postives = 108/159 (67.92%), Query Frame = 0
Query:  654 GYYEQDGGYYQGPQGRDQWDSRENAMDEYASFPVGSRALVRHSSSAPGSITEIREQQGLHLVKGAWARILVGTGKTRAVLHSAKERATGAASTASYKIKNTMGTMTSRVADALEDDPNGMIGPYGQPPQNYYSGS--VGPGDDRRPNPRPYRENGLAGY 810
            GYY ++ GYYQGP G +   +++    EY  FP GSRALV  +  AP    E++EQ GL LVKGAWARILVG  KT A L+ AKE+A  AASTASYKIKNTMG++TSRVAD LE DP G+ GPYGQPPQ  Y G   +G G  ++ +PR ++     GY
Sbjct:  500 GYYGRNDGYYQGPPGGNGAPTQQGNA-EYGGFPAGSRALVPSNGGAPRGGLEVKEQ-GLQLVKGAWARILVGKDKTTAALYEAKEKAGIAASTASYKIKNTMGSVTSRVADVLEGDPQGLAGPYGQPPQEDYYGEPGMGAGGQQQQDPRSWQGAPQNGY 656          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig598.13631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXY0_9PHAE2.090e-3933.06WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LJY1_ECTSI3.630e-3355.35WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 108..140
e-value: 0.0042
score: 26.3
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 107..140
score: 13.477
NoneNo IPR availableGENE3D2.20.70.10coord: 106..157
e-value: 1.4E-7
score: 33.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..977
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.835
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 102..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig598contigH-paniculata_contig598:14771..20353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig598.13631.1mRNA_H-paniculata_contig598.13631.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig598 14677..20952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig598.13631.1 ID=prot_H-paniculata_contig598.13631.1|Name=mRNA_H-paniculata_contig598.13631.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=978bp
MAGTVCVRAFYLLAFALFEAVRALQSDAGGTYAGSSYSNGTPSYTAQHST
NPQITAHHPHPHQPQQQRQQQQQQEAEHERLRQQAPASNKPTPRNRDGDA
ADTDELPPLPRGWGELRTGDGRSYYVYYPTGAVQWQRPAPEPKTVTDDVD
GSQPEQQSRSDNDTQELGGDGSGGGEGGEEGPLGGESEMSDAELNIDATG
HGGTQRSMTGSGGVANAGVTRSGIEDDGQTAQPQTNRITGAPYPSAPWGQ
RSSLAADTSDLSSSQRSLPQPPTEADPKWPTPPSSPPFQAVSQQQQQQRL
PDRSSEFQPWGGGDSTFASTFPPHAPEQSQGLQEGSFDASGSRPPIWGID
SGRQSIEQLPEQFPTDKDAPWGIKAGQQQQFPAANDVASSAATTQTWEQG
QPAEGNDSLGAEGLGAPAGTSTMPTDSSGSDCGSWGAAEGLAAEQGQEKG
SGSGASKFIADPWLGGGREQTQTQDRAGQEQGVPRAEVGAGTNGGLAPSG
EGASSHWSEQERPIPYPASYVQQQPQVRESPQGSFNGASPSQQRQQQMEP
MYQRSNKPESWGTDAEPRGPGRTSHGEQGQHPRLSRGPQNGPPQDWERAS
SPPSMDHGQDSDWRASASQGPGAKEYEPPPGWVEARYAGQGQPRMGEQGQ
QHEGYYEQDGGYYQGPQGRDQWDSRENAMDEYASFPVGSRALVRHSSSAP
GSITEIREQQGLHLVKGAWARILVGTGKTRAVLHSAKERATGAASTASYK
IKNTMGTMTSRVADALEDDPNGMIGPYGQPPQNYYSGSVGPGDDRRPNPR
PYRENGLAGYAGNSQSDPRGPGGGGGYPGYQGSASGTPGSYGTRDGGYDS
GVTRAPHPGSRVAPMGGFPGPYPGAQGMGGGGEGAGGGYGSQAGQASQGG
FSQDLSGDPGAGNVGRASGFSKGCDAASQGEAQARGYSFHVQPQQLQQLQ
QLQQPRPQGQQGAVGGGADGGYWARLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf