prot_H-paniculata_contig5972.13624.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5972.13624.1
Unique Nameprot_H-paniculata_contig5972.13624.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: F6XJN3_MOUSE (Coatomer subunit alpha (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=F6XJN3_MOUSE)

HSP 1 Score: 166 bits (421), Expect = 3.290e-51
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGRM 99
            MNE+KAWEV T  GH NNVSC +FHP++ELI+SNSED+SIRVWD+S+R GVQTFRR++DRFW+LAAHP  NL AAGHD GMIVFKLERERPAY  HG M
Sbjct:   10 MNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNM 108
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A5D6XEH5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XEH5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.130e-50
Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTH 96
            MNETKAWEV TM GHTNNVSCV+FHP+ ELI+SNSEDRSIRVWDIS+RMG+QTFRRENDRFWI+ AHP QNLLAAGHDSGMIVFKLERERPA D H
Sbjct:    1 MNETKAWEVDTMRGHTNNVSCVLFHPRHELIISNSEDRSIRVWDISKRMGLQTFRRENDRFWIMQAHPTQNLLAAGHDSGMIVFKLERERPAMDLH 96
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: UPI00138FF18C (coatomer subunit alpha-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FF18C)

HSP 1 Score: 162 bits (409), Expect = 2.610e-47
Identity = 73/97 (75.26%), Postives = 85/97 (87.63%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG 97
            MN++KAWEV T  GH NNVSC +FHP++EL++SNSED+SIRVWD+S+R GVQTFRRE+DRFW +AAHP  NL AAGHDSGMIVFKLERERPAY  HG
Sbjct:   18 MNDSKAWEVDTCRGHYNNVSCALFHPRQELMLSNSEDKSIRVWDMSKRTGVQTFRREHDRFWTIAAHPTLNLFAAGHDSGMIVFKLERERPAYAVHG 114
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A2L0C039_9COLE (Coatomer alpha subunit (Fragment) n=1 Tax=Noteucinetus sp. CSR103 TaxID=2055468 RepID=A0A2L0C039_9COLE)

HSP 1 Score: 158 bits (399), Expect = 9.570e-47
Identity = 69/99 (69.70%), Postives = 84/99 (84.85%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGRM 99
            MN+ KAWEV T  GH NNVSCV+FHP++EL++SNSED+SIRVWDIS+R  + TFRRE++RFW+L +HP  NL AAGHDSGMI+FKLERERPAY  HG +
Sbjct:   11 MNDMKAWEVDTCRGHYNNVSCVLFHPRQELLLSNSEDKSIRVWDISKRTSMHTFRREHERFWVLTSHPSLNLFAAGHDSGMIIFKLERERPAYTVHGNL 109
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A2L0C058_9COLE (Coatomer alpha subunit (Fragment) n=1 Tax=Derodontus sp. CSR091 TaxID=2055390 RepID=A0A2L0C058_9COLE)

HSP 1 Score: 156 bits (394), Expect = 5.470e-46
Identity = 67/99 (67.68%), Postives = 85/99 (85.86%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGRM 99
            MNE+KAWEV T  GH NNVSCV+FHP++EL++SNSED+SIRVWD+++R  + TFRRE++RFW+L +HP  NL AAGHD+GMI+FKLERERPAY  HG +
Sbjct:   10 MNESKAWEVDTCRGHYNNVSCVLFHPRQELLISNSEDKSIRVWDMTKRTCLHTFRREHERFWVLTSHPSLNLFAAGHDTGMIIFKLERERPAYTVHGNL 108
[Close]
BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A811SNZ5_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811SNZ5_9POAL)

HSP 1 Score: 164 bits (415), Expect = 5.520e-45
Identity = 74/97 (76.29%), Postives = 87/97 (89.69%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG 97
            MN+TKAWEV T+ GH NNVSCV+FH K+++IVSNSED+SIR+WD ++R G+QTFRRE+DRFWILAAHPE NLLAAGHDSGMIVFKLERERPA+   G
Sbjct:  184 MNDTKAWEVDTLRGHMNNVSCVLFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFCVSG 280
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: UPI000B8CDC4F (LOW QUALITY PROTEIN: coatomer subunit alpha-1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CDC4F)

HSP 1 Score: 162 bits (411), Expect = 1.100e-44
Identity = 73/95 (76.84%), Postives = 85/95 (89.47%), Query Frame = 0 
Query:    3 ETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG 97
            ETKAWEV T+ GH NNVSCV+FH K+++IVSNSED+SIRVWD+++R G+QTFRRE+DRFWILA HPE NLLAAGHDSGMIVFKLERERPA+   G
Sbjct:   29 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILATHPEMNLLAAGHDSGMIVFKLERERPAFSVSG 123
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A371H524_MUCPR (Coatomer subunit alpha-1 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H524_MUCPR)

HSP 1 Score: 162 bits (411), Expect = 1.950e-44
Identity = 74/94 (78.72%), Postives = 85/94 (90.43%), Query Frame = 0 
Query:    4 TKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG 97
            TKAWEV T+ GHTNNVSCV+FH K+++IVSNSED+SIRVWD ++R G+QTFRRE+DRFWILAAHPE NLLAAGHDSGMIVFKLERERPA+   G
Sbjct:  255 TKAWEVDTLRGHTNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFAVSG 348
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BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A6D2ITH8_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2ITH8_9BRAS)

HSP 1 Score: 157 bits (398), Expect = 3.270e-44
Identity = 73/97 (75.26%), Postives = 85/97 (87.63%), Query Frame = 0 
Query:    1 MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHG 97
            MNETKAWEV T+ GH NNVS V+FH K+++IVSNSED+SIRVWD ++R G+QTFRRE+DRFWILA HPE NLLAAGHD+GMIVFKLERERPA+   G
Sbjct:    1 MNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIVFKLERERPAFALSG 97
[Close]
BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Match: A0A3Q3XN58_MOLML (Coatomer subunit alpha n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3XN58_MOLML)

HSP 1 Score: 161 bits (408), Expect = 4.950e-44
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 0 
Query:    3 ETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMGVQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGRM 99
            E+KAWE+ T  GH NNVSC +FHP++ELI+SNSED+SIRVWD+S+R GVQTFRR++DRFW+L AHP  NL AAGHDSGMIVFKLERERPAY  HG M
Sbjct:  212 ESKAWELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAHPNLNLFAAGHDSGMIVFKLERERPAYAVHGNM 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5972.13624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F6XJN3_MOUSE3.290e-5175.76Coatomer subunit alpha (Fragment) n=1 Tax=Mus musc... [more]
A0A5D6XEH5_9STRA2.130e-5086.46Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
UPI00138FF18C2.610e-4775.26coatomer subunit alpha-like n=1 Tax=Nematostella v... [more]
A0A2L0C039_9COLE9.570e-4769.70Coatomer alpha subunit (Fragment) n=1 Tax=Noteucin... [more]
A0A2L0C058_9COLE5.470e-4667.68Coatomer alpha subunit (Fragment) n=1 Tax=Derodont... [more]
A0A811SNZ5_9POAL5.520e-4576.29Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
UPI000B8CDC4F1.100e-4476.84LOW QUALITY PROTEIN: coatomer subunit alpha-1 n=1 ... [more]
A0A371H524_MUCPR1.950e-4478.72Coatomer subunit alpha-1 (Fragment) n=1 Tax=Mucuna... [more]
A0A6D2ITH8_9BRAS3.270e-4475.26Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A3Q3XN58_MOLML4.950e-4474.23Coatomer subunit alpha n=1 Tax=Mola mola TaxID=942... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 5..44
e-value: 4.6E-9
score: 46.1
coord: 47..85
e-value: 130.0
score: 3.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 8..44
e-value: 2.6E-8
score: 34.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 12..53
score: 16.591
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..87
e-value: 1.9E-29
score: 104.4
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 1..94
NoneNo IPR availablePANTHERPTHR19876:SF38coord: 1..94
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 12..94
score: 15.926
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5972contigH-paniculata_contig5972:11959..12989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5972.13624.1mRNA_H-paniculata_contig5972.13624.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5972 11941..12989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5972.13624.1 ID=prot_H-paniculata_contig5972.13624.1|Name=mRNA_H-paniculata_contig5972.13624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MNETKAWEVHTMTGHTNNVSCVIFHPKRELIVSNSEDRSIRVWDISQRMG
VQTFRRENDRFWILAAHPEQNLLAAGHDSGMIVFKLERERPAYDTHGRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf