mRNA_H-paniculata_contig5968.13617.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5968.13617.1
Unique NamemRNA_H-paniculata_contig5968.13617.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 605 bits (1560), Expect = 8.970e-195
Identity = 368/861 (42.74%), Postives = 487/861 (56.56%), Query Frame = 2
Query:  482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQRNPRNQG------------FSVDRIG-STPSLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAIDGHKKVNFVTWEVALEMWSKVVSALGLSGEIGEDIGEQQR-GEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETK-ELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDS-----RIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVD---EAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPALGGLV----EALGAKMERVSV--AGLCRSEKAMLRNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVIS--------LGNQVRGRDGVVSVSHPSRGIGVGVVRL--------VPAEGVSYE*LKEAIRGFEVASVQ-GKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFV 2917
            WLD+LLCRVPG AVL+VATHAD FG D +  A AL  L   V EHLE KR +W A  +  +R   +Q                DR   + PSL LCG I  SG     L ++   I E+ +E         +FP++ + +P  W RVWA + AL+ GADP  A  L G   V I+G  K  FVT E A E+WS          E     GEQ R    R  K AL +R  GG+VL  CGL+HL+PSWIN+LLRE+LDHRL DP +  WW  QL  Y R  G    EL+  H++F  TG LT ++LRFLWR V +  + +VF R++ TM+ + AMF C+   TE      ++P+RLP  V  D+ A+L+ A+  G RMQFVI+IYAKYVP  IIA+FLGGF RD       ++ R CW RG AF+ DGRE LV + E +      IE+N+AG     V   GF + + +  LL + YPGL  D S +PRF +G EAW ++L ALQ+ L  ++D   E+VL +   A++ + ++  E            +++R L SL  D +RDA  +LD  +  +V    + + A +   +V   GL  +E+ +L ++A++VA+L WP+P L C+LPA +     L E DR F  W+  L+  C  G K G+G   + LRLFFLC  D SLAECGPDGQGY+V E+L W KK +PLA+LGLAL SIA+  CTGL +PA++I   L    GG +S  VE  + S         G ++        V H       G  RL         P +G +Y+ LKE IR F+V   Q GKS  PS   FD+TMQLVDRGGRGVE AWVR  NVDQ+V
Sbjct:  288 WLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPA-------VFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPV-VTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVDEKVFARLVETMTAHDAMFPCNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFKGQSLSVNE------------AVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHH------AGACRLEREKMRRPTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPS---FDKTMQLVDRGGRGVEWAWVRRRNVDQYV 1119          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 604 bits (1558), Expect = 2.970e-194
Identity = 366/875 (41.83%), Postives = 490/875 (56.00%), Query Frame = 2
Query:  482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQR---NPRNQ----------GFSVDRIGSTP-SLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAIDGHKKVNFVTWEVALEMWSKVVSALGLSGEI-------GEDIGEQQRGEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFR-----DSRIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVD---EAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPA----LGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLRWPVPRLACLLPAYDGLLTEHDRGFHIWTCRLRSWCRG-------------------GKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITA------LEETVGGAVSTVVENHVISLGNQV-RGRDGVVSVSHPSRGI-GVGVVRLVPAEGVSYE*LKEAIRGFEVASVQGK-SRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVGE 2923
            WLD+LLCRVPG  VL+VATHAD FG +++  AAAL++L   + +HL+ KR EW+   +  ++    P+++          G+  D   + P +L LCG I  SG    DL  L   I E+ +E         LFP+I Q +P SW RVWA + AL EGADP  A  L G     ++G +K  FVT E A E W       G+ GE        G D  + ++   R+ + AL +RQ GG+VL ACGLVHL+ +WIN LLRELLDHRLADP Q  WW  QL  YC   G +F  LI +H+ F+ TG LT +YLRFLWR+V  + + +VF R++ TM+++ AMF C+ +    +   ++P+RLPA+V   +LAEL++A+  G RMQFVI+I A YVP GII QFLG   R         +    W+RG AF+  G+E LV L E        +EVN+AG   + V   GF +   +  LL  RYPGL  DP   P F  G+EAW +  AAL+  L   ++   EAVL KI     +      E+ T  I   ID ++++ L SL  D++ D   +L+      + G+ + + A +   +VAGL  +E+ +L  +A++VA LRWP+PR  C+LPA D  L+E DR F  W+  L+ WC                      K + +G   R LRLFFLC  D SLAECGPDGQGYEVKE LDWV+K  P AK+GLAL SIAL  CTGL +       A      +   V  A+S  +E      GN++ R ++   S   P  G+ G G+  L+P EG  Y+ LKE I+ FEV   Q   SR PS   FD TM +VDR G GVE AWVR  N+DQFVGE
Sbjct:  283 WLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEAS-------LFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPL-APVEGREKREFVTREAAFEAW------WGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLGETCAPSQRVVEVNIAGGAEKDVYATGFGIKNLVVRLLEQRYPGLDFDPETKPTFKKGREAWQDTRAALRGDLVEELEPNLEAVLRKILEPSSSPGDGLAESNT-LIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMKVVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSEDMSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTLIPLEGFDYDKLKEVIKSFEVDRTQRDGSRYPS---FDTTMNIVDRRGHGVEWAWVRNRNIDQFVGE 1139          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE)

HSP 1 Score: 397 bits (1019), Expect = 2.930e-119
Identity = 251/643 (39.04%), Postives = 349/643 (54.28%), Query Frame = 2
Query:  482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQ---RNPRNQ----------GFSVDRIGSTP-SLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAIDGHKKVNFVTWEVALEMW----SKVVSALGLSGEIGEDIGEQQRGEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLADPAQVS-----------WWQGQLADYCRRNGSRFPELIAVHK---------------NFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFR-----DSRIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVD---EAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPA----LGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLR 2242
            WLD+LLCRVPG  VL+VAT+AD FG + +  AAAL++L   + EHLE KR EW+   +  +   + P+++          G+  D   + P +L LCG I  SG    DL  L   I E+  E+        LFP+I Q IP SW RVWA + AL EGADP  A  L G     ++G +K  FVT E A E W     + V+ L   G   + + +  +   R+ + AL +RQ GG+VL ACGLVHL+ +WIN LLRELLDHRLADP Q S           WW  QL  YCR  G  F  LI +H+                F+ TG +T +YLRFLWR+V  + + +VF R++ TM+++ AMF CD +    +   ++P+RLPA+V   +LAEL+ AI  G RMQFVI IYA YVP GII QFLG   R         +    W+RG AF+  G++ LV L E        +EVN+AG   + V + GFA+ + +  LL  RYPGL  DP   P  + G+EAW E  AAL+  L   ++   EAVL +I            E+ T  I   ID ++++ L SL  D++ D   +L+      + G+ + + A +   +V GL  SE+ +L  +A+++A LR
Sbjct:  178 WLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRMEWQTAQRQAENTKQTPQDRCGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEES-------LFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDGPL-APVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQ---RLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLFNRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCDKNGIHQEGEFMVPARLPASVPCASLAELEKAISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCVPSQRVVEVNIAGDAEKDVYDTGFAIKKLIVRLLEKRYPGLDFDPEANPTLMKGKEAWQETRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNT-LIPKLIDGALAKRLTSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVVGLRPSERNILVGVARELALLR 808          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 3.150e-60
Identity = 254/883 (28.77%), Postives = 368/883 (41.68%), Query Frame = 2
Query:  482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQRNPRNQGFSVDRIGSTPSLTLCGIIE---------ASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAI-------DGHKKVNFVTWEVALEMWSKVVSAL-GLSGEIGEDIGEQQRGEDRVLKEALTMRQAGGTVLV-----------------------ACGLVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAV---HKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDSRIILRACWNRGAAFIMDGREHLVCLHE-PTG------DESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAV---------LGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPALGGLVEALGAKMERVSVAGLCRSEKAML-RNMAQDVAYLRWPVPRLACLLPAYDGL---LTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVSHPSRGI--GVGVVRLV-----PAEGVSYE*LKEAIRGFEVASVQGKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVG 2920
            WL+ L  RVPG  VL+V TH D F  +              VEE +   R E ++    ++     +G + D  G+     L  +++         +S  +  DL+  RL         G        FP++   +P  +    A + A+  GAD       +G++R A+       D  K+ +FV +  A+ +++K   ++      +    GE +R    +   A+   +A G +L+                       A  ++H++PS    L+R ++D RL DP Q    Q ++ +      S  P L+ +   HK F++ G ++ DYL+FLW +  +L             S          +  E     LL  R    V D   A             FV D   +YV A  +     G   D   IL      G+A I   +  LV  H  P G          R E  +    +  V    FA    L  L   R         C+ R   G  + D++     + +  +V E +         LG + R+ E++E         T++    DS  ++L     D+ RD +                            + K M+ R+M QDVA+LRWP+PRL C+LPA +     L E DR F  W+  LR+WC  GK+ GKG   R LR+FFLC  D SLAECGP GQGYEV E+L W KK  P A++G AL SIAL  C GL +P  +    L    GGA+S   E  + S    V    G       + G+  G G          P +G +YE LKE I+ FEV  ++G+S  PS   FD  M LVDRGGRG E AWVRT N+DQF G
Sbjct:  464 WLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETE-LGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYS------FPSVRSVVPEPYLPAIATLEAVRRGAD----LRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRR----IFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQ----QAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEA----------SQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHA-------------FVPD---RYVVASCLPN-KAGLNVDPGKILEL--KMGSA-IYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVC---FAFKNHLVLLYEVRAIDGTSWIECHAR---GNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLV-RSGESEE---------TVISS--DSDHKALLERIVDVLRDQM----------------------------NVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGGRAEGLPQGAGAHGAQQGWPSPVQGFTYETLKEVIKSFEVDGMRGRSPFPS---FDAKMHLVDRGGRGEEWAWVRTKNIDQFAG 1248          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 4.040e-59
Identity = 256/904 (28.32%), Postives = 371/904 (41.04%), Query Frame = 2
Query:  482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWE-------AENKAIQRNPRNQGFSVDR----IGSTPSLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAI-------DGHKKVNFVTWEVALEMWSKV--------VSALGLS-------GEIGEDIGEQQRGED----RVLKEALTMRQAGGTVL---------------VACG--------LVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDSRIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLD------PALG--------GLVEALGAKMERVS-VAGLCRSE---KAML-RNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVSHPSRGI--GVGVVRL-------VPAEGVSYE*LKEAIRGFEVASVQGKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVG 2920
            WLD L  RVPG  +L+V TH D F  +              VE+   MKR   +       AE +  +R+P  +G    R    +     LTL   + +S      L+  RL         G        F ++   +P  +  V A + A+  GAD       +G +R A+       D  K+ +FV +  A+ +  K         VS L  S                   G D    R+   A+   +A G +L               V  G        ++H++PS    L+R ++D RL DP Q    +  +A  C         L   HK F++ G ++ DYL+FLW +  EL                                   P   P  + +  +  +  ++L    M  V D +  +VP               R ++ +C    A               P  D    +E+  AGS              A+ +  +       + P   PR L+     + ++ A     K  V  A    +   +E ++      +     G + D    S R+  +DI     E ++      P LG         LV + G     V  +  + R +   K M+ R++ QD+A+LRWP+PRL C+LPA +     L E DR F  W+  LR+WC GGK+KGKG   R LRLFFLC  D SLAECGP GQGYEV E+L W KK  PLAK+GLAL S A   CTGL +P ++    L    GGA+ST VE+ + S G  +    G       +  +  GVG  R         P +  +Y+ LKE I+ FEVA+++ +S  PS   FD  M+LVDRGG+G E +WVRT N+DQFVG
Sbjct:  169 WLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKI--MKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTLD--LTSSDWEDIGLLQRRLEHLAYNGYDGYS------FSSVRSVVPEPYLPVIATLEAVRLGAD----LRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAA-CPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQAS-------------------------------PEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVP--------------DRYVVASCLPNKAG--------------PEVDPGKMLELK-AGS--------------AVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACW---KRGVCFAFKNHMVLLYEVRDTAGNSWIECHARGSMFDE---SARTALNDIGDQVNELINDRKYGFPGLGLIRGESEEALVSSDGDHEALVKRIVNMLRDQMNVKFMMDRSIKQDLAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEADFEATLGTKAGGALSTFVEDSLNSGGESMASIAGERLDGGTADELLQGVGAQRFGAQQGWPSPVQAFAYDALKEVIKRFEVANMRDRSPFPS---FDVKMRLVDRGGQGAEWSWVRTKNIDQFVG 974          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 3.860e-57
Identity = 124/255 (48.63%), Postives = 155/255 (60.78%), Query Frame = 2
Query: 2204 MLRNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVS-------------HPSRGIGVGVVRLVPAEGVSYE*LKEAIRGFEVASVQGKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVG 2920
            M R+M QDVA+LRWP+PRL C+LPA +     L E DR F  W+  LR+WC GGK+ GKG   R LR+FFLC  D S+AECGP GQGYEV E+++W KK  P AK+GLAL SIAL  C GL +P  +    L    GGA+ST  E  + S      G + V S++             H + G G       P +G++YE LKE I+ FEV  ++ +S  PS   FD  M+LVDRGGRG E AWVRT N+DQFVG
Sbjct:  716 MDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHS------GVESVASIAGDRLDGGRAEGLPHGAGGHGAQQEWPSPMQGITYETLKEVIKSFEVDGMRHRSPFPS---FDVKMRLVDRGGRGAEWAWVRTKNIDQFVG 961          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 6.680e-25
Identity = 92/288 (31.94%), Postives = 129/288 (44.79%), Query Frame = 2
Query: 1790 VSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPALGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVIS 2644
            VS  GF    ++  LL   YPGL LD S  P    G+EAW ++L  L+      +DEA+  ++SR                                             P  G  ++ L A      + GL ++E+ +L ++AQ+VA++RWP+PRL  LL A D     LT   R            C   + KG+    R LRLFF  +  +SLA CGP G    V E+L+W KK +  AK+GLA+ SIAL  C GL +P  ++  A   + G  V+ VVE    S
Sbjct:  130 VSKVGFRAKGSMEQLLEQYYPGLQLDASADPTEGEGKEAWQDSLKGLRGTESLGLDEALANRLSR---------------------------------------------PRAGMQLDEL-APTSGAGIGGLNQTERNVLTSIAQNVAFMRWPIPRLVWLLLAPDSGEPALTAEQR------------C--NQAKGRRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIALKVCIGLAIPRMDLNAAFGASTGDVVTGVVEEAATS 355          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 3.380e-6
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 3
Query:  315 PCSAAGLEVVMWDFAGHADYYSTHQLFLTDGALHLLVVDLYKFHRN 452
            P     L+V +WDFAG ADYYS+HQLFLT GAL LLVVDL+ F + 
Sbjct:  325 PGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKE 370          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5LNE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE2_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.360e-5
Identity = 59/184 (32.07%), Postives = 75/184 (40.76%), Query Frame = 2
Query:  488 DALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELG-------------------TVVEEHLEMKRF----------------EW------EAENKAIQRNPRNQGFSVDRIGSTP-SLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEG 913
            D+LLCRVPG AVL+VAT A+ F  D    A+ L  L                    TV    L   RF                +W      +   +A Q    N   S +R  S P SL LC  I   G  S  L SL+  I ++  E G        FP++ Q +P SW RVWA + AL+ G
Sbjct:   11 DSLLCRVPGSAVLVVATRANPFA-DNSKRASTLESLEEQSRRTWSEKRRYVSSLLRTVASVALPGSRFLKHCSSCISTILLCSQQWLTAETIKNRQRAFQGGGSNANSSSERPPSPPPSLWLCRFISICGRSSDGLASLKKKIYDVIMEPGTDNFA---FPHLRQHVPNSWRRVWAVMSALHVG 190          
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 7.430e-5
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 3
Query:  333 LEVVMWDFAGHADYYSTHQLFLTDGALHLLVVDLYKFHRNPFRRG-----GAIY 479
            L V +WDF+G +DY+++HQ+FLT+GAL LLVVDL++  R+    G     GAIY
Sbjct:  473 LAVSLWDFSGQSDYHASHQIFLTEGALFLLVVDLFELGRDEKSAGIPDPRGAIY 526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LLG1_ECTSI8.970e-19542.74LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUH6_ECTSI2.970e-19441.83LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5L6I0_9PHAE2.930e-11939.04Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI3.150e-6028.77LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE4.040e-5928.32Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE3.860e-5748.63Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXK6_9PHAE6.680e-2531.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKS5_ECTSI3.380e-663.04LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5LNE2_9PHAE1.360e-532.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK68_ECTSI7.430e-551.85LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5968contigH-paniculata_contig5968:2601..8885 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.0
Seed ortholog evalue7.1e-138
Seed eggNOG ortholog2880.D7FUH6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size3393
Cds size2136
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5968.13617.1prot_H-paniculata_contig5968.13617.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5968 4582..8250 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930658.1918151-UTR-H-paniculata_contig5968:2600..29891622930658.1918151-UTR-H-paniculata_contig5968:2600..2989Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5968 2601..2989 +
1691481392.9305208-UTR-H-paniculata_contig5968:2600..29891691481392.9305208-UTR-H-paniculata_contig5968:2600..2989Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5968 2601..2989 +
1622930658.2171404-UTR-H-paniculata_contig5968:4348..45811622930658.2171404-UTR-H-paniculata_contig5968:4348..4581Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5968 4349..4581 +
1691481392.9407609-UTR-H-paniculata_contig5968:4348..45811691481392.9407609-UTR-H-paniculata_contig5968:4348..4581Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5968 4349..4581 +
1622930658.3203628-UTR-H-paniculata_contig5968:8250..88851622930658.3203628-UTR-H-paniculata_contig5968:8250..8885Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5968 8251..8885 +
1691481393.0229979-UTR-H-paniculata_contig5968:8250..88851691481393.0229979-UTR-H-paniculata_contig5968:8250..8885Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5968 8251..8885 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930658.2332928-CDS-H-paniculata_contig5968:4581..50641622930658.2332928-CDS-H-paniculata_contig5968:4581..5064Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 4582..5064 +
1691481392.9495337-CDS-H-paniculata_contig5968:4581..50641691481392.9495337-CDS-H-paniculata_contig5968:4581..5064Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 4582..5064 +
1622930658.2516713-CDS-H-paniculata_contig5968:5619..64741622930658.2516713-CDS-H-paniculata_contig5968:5619..6474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 5620..6474 +
1691481392.9685984-CDS-H-paniculata_contig5968:5619..64741691481392.9685984-CDS-H-paniculata_contig5968:5619..6474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 5620..6474 +
1622930658.265783-CDS-H-paniculata_contig5968:6962..76341622930658.265783-CDS-H-paniculata_contig5968:6962..7634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 6963..7634 +
1691481392.9854233-CDS-H-paniculata_contig5968:6962..76341691481392.9854233-CDS-H-paniculata_contig5968:6962..7634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 6963..7634 +
1622930658.2796774-CDS-H-paniculata_contig5968:7957..80441622930658.2796774-CDS-H-paniculata_contig5968:7957..8044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 7958..8044 +
1691481393.0013146-CDS-H-paniculata_contig5968:7957..80441691481393.0013146-CDS-H-paniculata_contig5968:7957..8044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 7958..8044 +
1622930658.2971845-CDS-H-paniculata_contig5968:8211..82501622930658.2971845-CDS-H-paniculata_contig5968:8211..8250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 8212..8250 +
1691481393.0117476-CDS-H-paniculata_contig5968:8211..82501691481393.0117476-CDS-H-paniculata_contig5968:8211..8250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5968 8212..8250 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5968.13617.1

>prot_H-paniculata_contig5968.13617.1 ID=prot_H-paniculata_contig5968.13617.1|Name=mRNA_H-paniculata_contig5968.13617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=712bp
MKRFEWEAENKAIQRNPRNQGFSVDRIGSTPSLTLCGIIEASGCRSPDLI
SLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADP
VVAAALTGKSRVAIDGHKKVNFVTWEVALEMWSKVVSALGLSGEIGEDIG
EQQRGEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLA
DPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRK
VHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDD
TLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDSRIILRACW
NRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEA
LCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAVLG
KISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDP
ALGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLRWPVPRLACLL
PAYDGLLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDF
SLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPAS
NIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVSHPSRGIGVGVV
RLVPAEGVSYE*
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mRNA from alignment at H-paniculata_contig5968:2601..8885+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5968.13617.1 ID=mRNA_H-paniculata_contig5968.13617.1|Name=mRNA_H-paniculata_contig5968.13617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6285bp|location=Sequence derived from alignment at H-paniculata_contig5968:2601..8885+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAGGAATTCCAAAAGCGACCGCGCAAGAGCTCCGTGACATTCCTAACCT GAAGGTGAAGCTGGACGACAACCCTTGGGAGGAGCCATCCTGGGAAGTGA TCAAAGACGGATGGCAACAGATCACTAACTACTGGGAGGCGCTAGAACGC TCCGGTGCAACCGAGACACATAGGTTGAAGGTTGTGCTTGTGGGGGCTGT GCGCGCGGGCCAAACGTCGCTGATGAGGGGCCTGAGGGAAGGGCGAGCAG CACCAACGACAGACAGTGAAAGAACACGCGGAGTGGATGTGCACATACAG CCGTGGCGACCTGACCCTGCTCTGCCGCTGGACTGGAGGTGGTCATGTGG GACTTCGCAGGGCACGCGGACTACTACTCGACGCATCAAGTTAGATTCGT TGGCGTTGTTGATGGTCGGTCGTGATAGTTATTATGAAGTTTCGGCCTTC CTTTTGGCATGATCGACTGGCACATGAAGCCGAATGCTGACGCGCTGCCA TTGGCAAGGACCACATTTTAAAAGTGGCGATCATAGTACTCTAGACAATG ACATAACTATGTCGGTGAAGTTCGTGCGTGCTTTGTGACGACCCACGCAT AACTACTCGGCTGCACTCGCACGTAAGCACGATCTTCACGGAAATAAGGT GTTAGATGTCGCTTGAGAACAGAACTGAAAACAATTTACCCCCCGGACAA AATGAATACTTGGCGTATTCACCACGAAAATTGGGAAGTACACCCCTAAG TTGCAGAATGAGCTCGTGTATTCCATGTGCCCCGGACCATCCGTGATTGC TAATAATATATTCGTAAATCGAATGGACAGGGGTGGGTATTTACTTCTAT TCTACGTGTCCGTTCACTCACTCTAAAACTCAGGCGAAAAAGTATTCGTG TATTGCTACGAGGGGTGATAATATTACAAAACTATGTCTTGACGTCCAGA TAAGGTGACAACCTAGAAAATCGTTCTCAGACCATATCCCATATGCACAT CAAGCCCTGTTTCCATGTTCAACGCCTAGACGTAACACAACGCCCTCGAC CTCCCCGGGTGCGTGTGTGTTTTCGACAGACAACTCAACATTGCTCCCAA CCAGCACAAAGCCGTCGGTCTAACACCCGTCTCTCAATCTCACCCCCTTC GGTGCACCTGTGCGCTTTTTACATCTGCACGCGTGGCGTTGCTAGCTGCA ATTAGTACATGAAAAGTCGTTATACAGACCTGGGAAACAACAAGCCTGTT TCATGTGATTTTAGTGTTTTGTAAACCATTTGGAGATAGTATGAGAATTT CTCGAAAGGAAGGAATATCTTCGCTTGAATTTAAACATGGAAAATCACAT TTGATAACCATGCACCCTCCTGGCTACTCTTGAGATAATTGCCCCCTTCC AATAATGTCTCCCGTGTGTTCACCATAGGTGTACACTACTTGTGAGTTGT CCGTTTTTTCAGCATTTGTTCCCAATGATATTAAAGCCGTGAGCATGGAT ACCTATAATAAGTACCCCTATAAAAATCATATAAGCAAAAACTAAAGTGG TTGCTAACTGACTAGCGACTGTAAAAGAATATGGAATTAAACCTAAGCTA TTTTATAATAAAACTATTTAAAACGTACTAGAAATAAAAAGGAAAATATT TTTCTCCTTTTATGCCCAAAATATCATATATCATATCTCACGCGCATCCA TCTATCCGTGGTGTTGTCCATTTATTCGATAATCGTGACCCTTCGCAGCT TTTCCTGACTGATGGTGCGCTGCACCTCCTTGTAGTGGACCTGTACAAGT TTCATCGAAATCCATTTCGCCGTGGCGGCGCCATTTACATTGGCTGGATG CCTTGCTCTGTCGCGTGCCTGGGTGCGCTGTACTAATCGTAGCAACCCAC GCCGATGATTTTGGAGGTGACCAAGACGGCGTCGCCGCGGCACTGGCAGA GTTGGGGACGGTAGTCGAGGAGCACCTGGAAATGAAACGCTTCGAGTGGG AGGCCGAAAACAAGGCTATACAAAGGAATCCGCGGAATCAAGGGTTTTCG GTAGATCGGATAGGGTCGACACCGTCGCTGACATTGTGTGGAATCATTGA GGCTTCGGGGTGCAGGTCGCCAGACCTTATCTCTCTCCGGCTAAACATTG CAGAGCTTGGTAGCGAGAAAGGAAAACGCCGCGATGGGACTCGACTTTTT CCGAATATCGGGCAGCCCATTCCGGTCTCGTGGGCTAGAGTGTGGGCGGC TGTGGGTGCCCTGTACGAGGGAGCTGATCCCGTAGTAGCTGCGGCACTGA CCGGAAAGTCACGTGTAGCGATCGACGGGCACAAGAAAGTCAATTTTGTG ACGTGGGAGGTGGCATTGGAGATGTGGTCAAAGGTGGTGAGCGCCCTGGG TCTCTCAGGGGAGATCGGAGAGGATATCGGAGAGCAACAGCGAGGGGAGG ATCGCGTTCTGAAGGTACCTTTATTTGCGCTTGGTGGATAGACAGATTGT AGTGCCTGCTCACTCGTAAGAAACTCTAATTTCGGGCAAGGTTCAAAAGC CTTTCATGCAGAACAGGCTCACCCGATGGACGAGTGTCTCATACTCGACA TAATGCAGTTAGTATAGGACCACGAGTTGAGCACAATTCTCAGAGATGCT TTTCTCAGGGTTACTAAATCTATGAGCGTCAATTTCTTGCAAGGTTATTT GTTGAGAACGGGCCGGAACTGTGAGGGACAAACATGTTTTTTGCCGGCGT TTCATACCATCTTCGGAATTGATCGTCGCAGTAGGGTTGGGAGCGGCGAG CGAGGTCTTCTTGGTAATGTCGCAGTCACTGTGCCGGACGAATCCTTGAA GGCGTATTTCCGATCCAGCATGGATTCTGTTTTTTAGTGGGTATATGAAC GTTGTCCGAGGGCAATAAAATTCGTTCCGATTCTTTAAACGTTATACTGC ACATTGCGTGAAGTAGGTTATCATCCTCACTTTCCTATCTTCTCGACCGC GCGGTTGGTCATCCCACAGGAGGCGCTGACCATGAGGCAAGCCGGAGGCA CGGTGCTCGTGGCGTGTGGTCTCGTGCACTTGGACCCCTCGTGGATAAAT CTGCTGTTGCGGGAGCTCCTGGATCACCGCCTGGCAGACCCGGCGCAGGT AAGCTGGTGGCAAGGGCAGCTGGCCGACTATTGCCGCAGAAATGGGAGTC GTTTTCCCGAACTCATCGCGGTCCACAAGAACTTCCTGAGAACAGGCCGC CTCACGAGCGACTATCTTCGATTTTTGTGGCGCAAGGTGCATGAACTCGC CAACCCACAAGTGTTCGGTCGGATGATCTCCACCATGTCCATGTACGGCG CCATGTTCCGGTGCGACCCCAGTAGCACCGAAACAAAGGAGCTCTTGTTG TTGCCTTCCCGATTGCCCGCTACAGTCGAGGATGACACTCTTGCTGAGCT AAAATCTGCAATTCTCAGCGGAATCAGGATGCAGTTTGTCATCGATATCT ACGCCAAGTACGTACCAGCAGGGATCATCGCGCAGTTCCTCGGCGGATTT TTTCGAGATAGTCGCATTATTCTCCGCGCGTGCTGGAATCGAGGAGCAGC ATTTATTATGGACGGCCGGGAGCACCTGGTTTGTCTCCACGAGCCGACAG GAGATGAGAGCGCAAGAATCGAGGTGAATGTTGCTGGCAGCACCCGAGAG ACCGTGTCGAATCATGGCTTCGCTGTCATGGAAGCCCTGTGCGCCCTGCT CATGGATCGATACCCGGGGTTGATGCTCGATCCGTCGTGCTACCCTCGGT TCCTGTCGGGCCAAGAAGCATGGGACGAGAACTTGGCTGCCCTGCAGAGG CACCTGAAGGGTCGGGTGGATGAGGTTAGATGAATTCGGTTTCGTTTTTT TCGGTACTTCATGCTTGAGTACAGGTACAAGCGTTTGAGCTCATGACAAG GGCGGGAACGAGAATAATAACAGCCGCACAGAACTTGTCCTTGACCTTGT ACTTGTAGCTCGAAATTTGGAACGACAATTGAACCTTTTCTCGTGTCCCA AAAGTAGTTTGTATAGGTGGGTACCGTCACCTATGTTTTTTCCACCCATT TTCATCGGTTACGAGAACTGGGTTGGGAAGAAAGGAACATGGATGTTTGC AAGTTCTAAGTGTTCACAGGCACATGGCGTAGGCGAGTGAAACCTTCAGC GGGGAATTTCTGACTTACACACCATGACTGTAGTTTGGCCGGGTAAGTGG CGTACGTCGCACAACAATGCCCTGATATCGGTCACAACCATGACAATGAT CACATGCTTTTGTTGCCCTTTCTTCTCGAAATTCCGCTCTCTCAGCTTGA ACACAACTCGAGGCTGTCCTTGGCAAGATTTCTAGAGCCTGGGAAACCAA AGAGGTGACAGCCAGGGAAAATTTAACATCGACAATCCTGGGTGGGATTG ACGATTCTATCTCTCGGAGTCTGCGAAGCCTTCGCCATGATATTGAGCGA GACGCTGTTGAGCGCCTGGATCCTGCCCTAGGTGGCCTTGTGGAAGCTCT AGGGGCAAAAATGGAGAGAGTATCCGTCGCTGGTCTTTGCCGATCTGAGA AAGCTATGCTGCGAAACATGGCGCAGGACGTGGCCTATCTTCGGTGGCCC GTACCTCGGCTAGCCTGTCTACTCCCAGCGTACGATGGCCTGCTGACGGA GCACGACCGAGGATTTCATATCTGGACGTGCCGGCTCCGATCGTGGTGCC GCGGTGGCAAGAAGAAGGGCAAGGGCAAGTTCAGGCGATATTTGCGCCTG TTTTTCCTGTGTGCCAGCGACTTCAGCTTGGCAGAGTGCGGGCCCGACGG GCAAGGGTACGAGGTAAAGGAGGTTCTAGACTGGGTCAAGAAGGTACAAC CACTCGCCAAATTGGGCTTGGCTCTTGGCAGCATTGCTCTCAGCACGTGC ACGGGGTTGCGCCTTCCTGCGAGCAATATCATCACTGCTTTGGAAGAGAC TGTAGGCGGCGCTGTGTCCACTGTCGTTGAGAATGTCGGGGTGCCGGATT TGAACGAGACGGCAATGACTGTCGGAGAGGATGTGAGCTGTAGATCTTTG GTCCGGCAGCTGAGCGGCACTGAAGATCGAAAGGTATGTTACCTGGCTTC GCTGACTCCGATCTTCATTCAGGTTTCCACTCGAGCTTGCCTGATTTTGA CATAGGTTTCGGACAGGAGGCAATCCCATAGCTTTTACAGGACGCGTCGT GAGTTGAGCGAGCGGCTGTGCCAGTCGAGCCCGGTTGGTTTCGGAATAAG TTGCCGTTTCTAGCACAAGAGTTGCACTTCAGATAAATCAGTTCCAGCAG CCAACAGCACGTCATATCCCTCGGCAATCAAGTCAGGGGTCGTGATGGAG TAGTTTCTGTCAGCCACCCGTCACGCGGGATAGGCGTAGGTGTGGTATTA TTGACGAGGACGCGTTGTAGCCACAATACAACATGTGCTGCATTGCTTCA TTAAGTCGGGGATCGGGGCCGTCCCAACACGCCAAAGAAGAACAGGAAAT GAGTCGAATCCTCATCATGCTAACATAGCGCACCCACCTCTGTTTCACCT TTACTATATAGGTGCGCCTTGTACCTGCTGAAGGCGTCTCGTATGAGTAA CTCAAGGAAGCCATTAGGGGCTTTGAGGTAGCTAGTGTTCAGGGGAAGAG CAGGCGCCCCTCGGTTCTGACGTTCGATAGGACAATGCAACTTGTCGACA GGGGTGGGCGTGGGGTGGAGTGAGCATGGGTTAGGACCGCAAATGTGGAC CAATTTGTCGGTGAAGCGTGACGATGGGGTAGTGGGTTTAGGGATGCCTG TTTTATGATTGTGACGGCTATATATTCGTGGATTTTCACAACTGCTGAAG TGCCGTTTTTTACAGTTTATAACACCCCTACCCCAGTGTGCCACCTCCCT CCGAAGACCACAGCATTCGTGACAAGAAATGTTTTCATTTTGGTCGTAAA CACTGGTGATACCGCGTTATTACCGCCGGTGATGACCTTGAATATTACCC AAGAAAAACTGTACCTGCAAGACGCATGAGTGTACAAAGGCTGTGGCTGG CACCAAACGCAAGAAGGGTGCGCACAAGATATTGCTACATGGTGGGAGGC GAGCGGCTTGCGTAACAATTCCCGTGCCGAAAAACATGGCCACTGAACTG AGTGATGTGACTGGGCTCAAGCGGTTTAAGGTACGGCAGACGGCATGGTC GAGAAGGTTTATCATCCAATCGTATTTGTCTATTG
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Coding sequence (CDS) from alignment at H-paniculata_contig5968:2601..8885+

>mRNA_H-paniculata_contig5968.13617.1 ID=mRNA_H-paniculata_contig5968.13617.1|Name=mRNA_H-paniculata_contig5968.13617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4272bp|location=Sequence derived from alignment at H-paniculata_contig5968:2601..8885+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAACGCTTCGAGTGGGAGGCCGAAAACAAGGCTATACAAAGGAATCC
GCGGAATCAAGGGTTTTCGGTAGATCGGATAGGGTCGACACCGTCGCTGA
CATTGTGTGGAATCATTGAGGCTTCGGGGTGCAGGTCGCCAGACCTTATC
TCTCTCCGGCTAAACATTGCAGAGCTTGGTAGCGAGAAAGGAAAACGCCG
CGATGGGACTCGACTTTTTCCGAATATCGGGCAGCCCATTCCGGTCTCGT
GGGCTAGAGTGTGGGCGGCTGTGGGTGCCCTGTACGAGGGAGCTGATCCC
GTAGTAGCTGCGGCACTGACCGGAAAGTCACGTGTAGCGATCGACGGGCA
CAAGAAAGTCAATTTTGTGACGTGGGAGGTGGCATTGGAGATGTGGTCAA
AGGTGGTGAGCGCCCTGGGTCTCTCAGGGGAGATCGGAGAGGATATCGGA
GAGCAACAGCGAGGGGAGGATCGCGTTCTGAAGATGAAACGCTTCGAGTG
GGAGGCCGAAAACAAGGCTATACAAAGGAATCCGCGGAATCAAGGGTTTT
CGGTAGATCGGATAGGGTCGACACCGTCGCTGACATTGTGTGGAATCATT
GAGGCTTCGGGGTGCAGGTCGCCAGACCTTATCTCTCTCCGGCTAAACAT
TGCAGAGCTTGGTAGCGAGAAAGGAAAACGCCGCGATGGGACTCGACTTT
TTCCGAATATCGGGCAGCCCATTCCGGTCTCGTGGGCTAGAGTGTGGGCG
GCTGTGGGTGCCCTGTACGAGGGAGCTGATCCCGTAGTAGCTGCGGCACT
GACCGGAAAGTCACGTGTAGCGATCGACGGGCACAAGAAAGTCAATTTTG
TGACGTGGGAGGTGGCATTGGAGATGTGGTCAAAGGTGGTGAGCGCCCTG
GGTCTCTCAGGGGAGATCGGAGAGGATATCGGAGAGCAACAGCGAGGGGA
GGATCGCGTTCTGAAGGAGGCGCTGACCATGAGGCAAGCCGGAGGCACGG
TGCTCGTGGCGTGTGGTCTCGTGCACTTGGACCCCTCGTGGATAAATCTG
CTGTTGCGGGAGCTCCTGGATCACCGCCTGGCAGACCCGGCGCAGGTAAG
CTGGTGGCAAGGGCAGCTGGCCGACTATTGCCGCAGAAATGGGAGTCGTT
TTCCCGAACTCATCGCGGTCCACAAGAACTTCCTGAGAACAGGCCGCCTC
ACGAGCGACTATCTTCGATTTTTGTGGCGCAAGGTGCATGAACTCGCCAA
CCCACAAGTGTTCGGTCGGATGATCTCCACCATGTCCATGTACGGCGCCA
TGTTCCGGTGCGACCCCAGTAGCACCGAAACAAAGGAGCTCTTGTTGTTG
CCTTCCCGATTGCCCGCTACAGTCGAGGATGACACTCTTGCTGAGCTAAA
ATCTGCAATTCTCAGCGGAATCAGGATGCAGTTTGTCATCGATATCTACG
CCAAGTACGTACCAGCAGGGATCATCGCGCAGTTCCTCGGCGGATTTTTT
CGAGATAGTCGCATTATTCTCCGCGCGTGCTGGAATCGAGGAGCAGCATT
TATTATGGACGGCCGGGAGCACCTGGTTTGTCTCCACGAGCCGACAGGAG
ATGAGAGCGCAAGAATCGAGGTGAATGTTGCTGGCAGCACCCGAGAGACC
GTGTCGAATCATGGCTTCGCTGTCATGGAAGCCCTGTGCGCCCTGCTCAT
GGATCGATACCCGGGGTTGATGCTCGATCCGTCGTGCTACCCTCGGTTCC
TGTCGGGCCAAGAAGCATGGGACGAGAACTTGGCTGCCCTGCAGAGGCAC
CTGAAGGGTCGGGTGGATGAGGAGGCGCTGACCATGAGGCAAGCCGGAGG
CACGGTGCTCGTGGCGTGTGGTCTCGTGCACTTGGACCCCTCGTGGATAA
ATCTGCTGTTGCGGGAGCTCCTGGATCACCGCCTGGCAGACCCGGCGCAG
GTAAGCTGGTGGCAAGGGCAGCTGGCCGACTATTGCCGCAGAAATGGGAG
TCGTTTTCCCGAACTCATCGCGGTCCACAAGAACTTCCTGAGAACAGGCC
GCCTCACGAGCGACTATCTTCGATTTTTGTGGCGCAAGGTGCATGAACTC
GCCAACCCACAAGTGTTCGGTCGGATGATCTCCACCATGTCCATGTACGG
CGCCATGTTCCGGTGCGACCCCAGTAGCACCGAAACAAAGGAGCTCTTGT
TGTTGCCTTCCCGATTGCCCGCTACAGTCGAGGATGACACTCTTGCTGAG
CTAAAATCTGCAATTCTCAGCGGAATCAGGATGCAGTTTGTCATCGATAT
CTACGCCAAGTACGTACCAGCAGGGATCATCGCGCAGTTCCTCGGCGGAT
TTTTTCGAGATAGTCGCATTATTCTCCGCGCGTGCTGGAATCGAGGAGCA
GCATTTATTATGGACGGCCGGGAGCACCTGGTTTGTCTCCACGAGCCGAC
AGGAGATGAGAGCGCAAGAATCGAGGTGAATGTTGCTGGCAGCACCCGAG
AGACCGTGTCGAATCATGGCTTCGCTGTCATGGAAGCCCTGTGCGCCCTG
CTCATGGATCGATACCCGGGGTTGATGCTCGATCCGTCGTGCTACCCTCG
GTTCCTGTCGGGCCAAGAAGCATGGGACGAGAACTTGGCTGCCCTGCAGA
GGCACCTGAAGGGTCGGGTGGATGAGGCTGTCCTTGGCAAGATTTCTAGA
GCCTGGGAAACCAAAGAGGTGACAGCCAGGGAAAATTTAACATCGACAAT
CCTGGGTGGGATTGACGATTCTATCTCTCGGAGTCTGCGAAGCCTTCGCC
ATGATATTGAGCGAGACGCTGTTGAGCGCCTGGATCCTGCCCTAGGTGGC
CTTGTGGAAGCTCTAGGGGCAAAAATGGAGAGAGTATCCGTCGCTGGTCT
TTGCCGATCTGAGAAAGCTATGCTGCGAAACATGGCGCAGGACGTGGCCT
ATCTTCGGTGGCCCGTACCTCGGCTAGCCTGTCTACTCCCAGCGTACGAT
GGCCTGCTGACGGAGCACGACCGAGGATTTCATATCTGGACGTGCCGGCT
CCGATCGTGGTGCCGCGGTGGCAAGAAGAAGGGCAAGGGCAAGTTCAGGC
GATATTTGCGCCTGTTTTTCCTGTGTGCCAGCGACTTCAGCTTGGCAGAG
TGCGGGCCCGACGGGCAAGGGTACGAGGTAAAGGAGGTTCTAGACTGGGT
CAAGAAGGTACAACCACTCGCCAAATTGGGCTTGGCTCTTGGCAGCATTG
CTCTCAGCACGTGCACGGGGTTGCGCCTTCCTGCGAGCAATATCATCACT
GCTTTGGAAGAGACTGTAGGCGGCGCTGTGTCCACTGTCGTTGAGAATGC
TGTCCTTGGCAAGATTTCTAGAGCCTGGGAAACCAAAGAGGTGACAGCCA
GGGAAAATTTAACATCGACAATCCTGGGTGGGATTGACGATTCTATCTCT
CGGAGTCTGCGAAGCCTTCGCCATGATATTGAGCGAGACGCTGTTGAGCG
CCTGGATCCTGCCCTAGGTGGCCTTGTGGAAGCTCTAGGGGCAAAAATGG
AGAGAGTATCCGTCGCTGGTCTTTGCCGATCTGAGAAAGCTATGCTGCGA
AACATGGCGCAGGACGTGGCCTATCTTCGGTGGCCCGTACCTCGGCTAGC
CTGTCTACTCCCAGCGTACGATGGCCTGCTGACGGAGCACGACCGAGGAT
TTCATATCTGGACGTGCCGGCTCCGATCGTGGTGCCGCGGTGGCAAGAAG
AAGGGCAAGGGCAAGTTCAGGCGATATTTGCGCCTGTTTTTCCTGTGTGC
CAGCGACTTCAGCTTGGCAGAGTGCGGGCCCGACGGGCAAGGGTACGAGG
TAAAGGAGGTTCTAGACTGGGTCAAGAAGGTACAACCACTCGCCAAATTG
GGCTTGGCTCTTGGCAGCATTGCTCTCAGCACGTGCACGGGGTTGCGCCT
TCCTGCGAGCAATATCATCACTGCTTTGGAAGAGACTGTAGGCGGCGCTG
TGTCCACTGTCGTTGAGAATCACGTCATATCCCTCGGCAATCAAGTCAGG
GGTCGTGATGGAGTAGTTTCTGTCAGCCACCCGTCACGCGGGATAGGCGT
AGGTGTGCACGTCATATCCCTCGGCAATCAAGTCAGGGGTCGTGATGGAG
TAGTTTCTGTCAGCCACCCGTCACGCGGGATAGGCGTAGGTGTGGTGCGC
CTTGTACCTGCTGAAGGCGTCTCGTATGAGTAAGTGCGCCTTGTACCTGC
TGAAGGCGTCTCGTATGAGTAA
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