mRNA_H-paniculata_contig5968.13617.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 605 bits (1560), Expect = 8.970e-195 Identity = 368/861 (42.74%), Postives = 487/861 (56.56%), Query Frame = 2
Query: 482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQRNPRNQG------------FSVDRIG-STPSLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAIDGHKKVNFVTWEVALEMWSKVVSALGLSGEIGEDIGEQQR-GEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETK-ELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDS-----RIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVD---EAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPALGGLV----EALGAKMERVSV--AGLCRSEKAMLRNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVIS--------LGNQVRGRDGVVSVSHPSRGIGVGVVRL--------VPAEGVSYE*LKEAIRGFEVASVQ-GKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFV 2917
WLD+LLCRVPG AVL+VATHAD FG D + A AL L V EHLE KR +W A + +R +Q DR + PSL LCG I SG L ++ I E+ +E +FP++ + +P W RVWA + AL+ GADP A L G V I+G K FVT E A E+WS E GEQ R R K AL +R GG+VL CGL+HL+PSWIN+LLRE+LDHRL DP + WW QL Y R G EL+ H++F TG LT ++LRFLWR V + + +VF R++ TM+ + AMF C+ TE ++P+RLP V D+ A+L+ A+ G RMQFVI+IYAKYVP IIA+FLGGF RD ++ R CW RG AF+ DGRE LV + E + IE+N+AG V GF + + + LL + YPGL D S +PRF +G EAW ++L ALQ+ L ++D E+VL + A++ + ++ E +++R L SL D +RDA +LD + +V + + A + +V GL +E+ +L ++A++VA+L WP+P L C+LPA + L E DR F W+ L+ C G K G+G + LRLFFLC D SLAECGPDGQGY+V E+L W KK +PLA+LGLAL SIA+ CTGL +PA++I L GG +S VE + S G ++ V H G RL P +G +Y+ LKE IR F+V Q GKS PS FD+TMQLVDRGGRGVE AWVR NVDQ+V
Sbjct: 288 WLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPA-------VFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPV-VTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDEWWWKQLKAYERNRGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKGVDEKVFARLVETMTAHDAMFPCNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRDESGVFRNLMFRTCWARGVAFVADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLREAYPGLAFDSSAHPRFENGTEAWQDSLEALQKDLFDKLDQRLESVLSEFLEAFKGQSLSVNE------------AVARRLNSLCLDCQRDANFQLDAKVHEVVARVEQVVRASLSTTAVPKGGLNETERGILNSLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHH------AGACRLEREKMRRPTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPS---FDKTMQLVDRGGRGVEWAWVRRRNVDQYV 1119
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 604 bits (1558), Expect = 2.970e-194 Identity = 366/875 (41.83%), Postives = 490/875 (56.00%), Query Frame = 2
Query: 482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQR---NPRNQ----------GFSVDRIGSTP-SLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAIDGHKKVNFVTWEVALEMWSKVVSALGLSGEI-------GEDIGEQQRGEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFR-----DSRIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVD---EAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPA----LGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLRWPVPRLACLLPAYDGLLTEHDRGFHIWTCRLRSWCRG-------------------GKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITA------LEETVGGAVSTVVENHVISLGNQV-RGRDGVVSVSHPSRGI-GVGVVRLVPAEGVSYE*LKEAIRGFEVASVQGK-SRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVGE 2923
WLD+LLCRVPG VL+VATHAD FG +++ AAAL++L + +HL+ KR EW+ + ++ P+++ G+ D + P +L LCG I SG DL L I E+ +E LFP+I Q +P SW RVWA + AL EGADP A L G ++G +K FVT E A E W G+ GE G D + ++ R+ + AL +RQ GG+VL ACGLVHL+ +WIN LLRELLDHRLADP Q WW QL YC G +F LI +H+ F+ TG LT +YLRFLWR+V + + +VF R++ TM+++ AMF C+ + + ++P+RLPA+V +LAEL++A+ G RMQFVI+I A YVP GII QFLG R + W+RG AF+ G+E LV L E +EVN+AG + V GF + + LL RYPGL DP P F G+EAW + AAL+ L ++ EAVL KI + E+ T I ID ++++ L SL D++ D +L+ + G+ + + A + +VAGL +E+ +L +A++VA LRWP+PR C+LPA D L+E DR F W+ L+ WC K + +G R LRLFFLC D SLAECGPDGQGYEVKE LDWV+K P AK+GLAL SIAL CTGL + A + V A+S +E GN++ R ++ S P G+ G G+ L+P EG Y+ LKE I+ FEV Q SR PS FD TM +VDR G GVE AWVR N+DQFVGE
Sbjct: 283 WLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQTPQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEAS-------LFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPL-APVEGREKREFVTREAAFEAW------WGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQAKWWVEQLKTYCHDRGVKFNRLIGIHRRFVITGMLTKEYLRFLWREVKAVQDEEVFDRLVDTMALHDAMFPCEKNGVLEEGEFMVPARLPASVACASLAELENAVSQGTRMQFVINIEAGYVPPGIIPQFLGELKRRDGGISGDFVFHVSWHRGVAFMTAGQEILVRLGETCAPSQRVVEVNIAGGAEKDVYATGFGIKNLVVRLLEQRYPGLDFDPETKPTFKKGREAWQDTRAALRGDLVEELEPNLEAVLRKILEPSSSPGDGLAESNT-LIPKLIDGALAKRLSSLCSDMQLDVNRKLNETTMKVVAGVEQVVQANLSNAAVAGLRPTERDILVGVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSEDMSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTLIPLEGFDYDKLKEVIKSFEVDRTQRDGSRYPS---FDTTMNIVDRRGHGVEWAWVRNRNIDQFVGE 1139
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5L6I0_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 2.930e-119 Identity = 251/643 (39.04%), Postives = 349/643 (54.28%), Query Frame = 2
Query: 482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQ---RNPRNQ----------GFSVDRIGSTP-SLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAIDGHKKVNFVTWEVALEMW----SKVVSALGLSGEIGEDIGEQQRGEDRVLKEALTMRQAGGTVLVACGLVHLDPSWINLLLRELLDHRLADPAQVS-----------WWQGQLADYCRRNGSRFPELIAVHK---------------NFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFR-----DSRIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVD---EAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPA----LGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLR 2242
WLD+LLCRVPG VL+VAT+AD FG + + AAAL++L + EHLE KR EW+ + + + P+++ G+ D + P +L LCG I SG DL L I E+ E+ LFP+I Q IP SW RVWA + AL EGADP A L G ++G +K FVT E A E W + V+ L G + + + + R+ + AL +RQ GG+VL ACGLVHL+ +WIN LLRELLDHRLADP Q S WW QL YCR G F LI +H+ F+ TG +T +YLRFLWR+V + + +VF R++ TM+++ AMF CD + + ++P+RLPA+V +LAEL+ AI G RMQFVI IYA YVP GII QFLG R + W+RG AF+ G++ LV L E +EVN+AG + V + GFA+ + + LL RYPGL DP P + G+EAW E AAL+ L ++ EAVL +I E+ T I ID ++++ L SL D++ D +L+ + G+ + + A + +V GL SE+ +L +A+++A LR
Sbjct: 178 WLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRMEWQTAQRQAENTKQTPQDRCGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEES-------LFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDGPL-APVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQ---RLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQASFVSLSHFAAANWWVEQLRTYCRERGVLFNRLIGIHRVQTVPCKNNQSCALRRFVITGVITKEYLRFLWREVKAVQDDEVFDRLVDTMALHDAMFPCDKNGIHQEGEFMVPARLPASVPCASLAELEKAISQGTRMQFVIAIYAGYVPPGIIPQFLGELKRRDCGISGEFVFHVSWHRGVAFMTAGQQILVRLGETCVPSQRVVEVNIAGDAEKDVYDTGFAIKKLIVRLLEKRYPGLDFDPEANPTLMKGKEAWQETRAALRGDLVEELERNLEAVLRRILEPSSNPGDGLAESNT-LIPKLIDGALAKRLTSLCSDMQLDVNRKLNETTMEIVAGVEQVVQANLSNAAVVGLRPSERNILVGVARELALLR 808
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 237 bits (604), Expect = 3.150e-60 Identity = 254/883 (28.77%), Postives = 368/883 (41.68%), Query Frame = 2
Query: 482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWEAENKAIQRNPRNQGFSVDRIGSTPSLTLCGIIE---------ASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAI-------DGHKKVNFVTWEVALEMWSKVVSAL-GLSGEIGEDIGEQQRGEDRVLKEALTMRQAGGTVLV-----------------------ACGLVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAV---HKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDSRIILRACWNRGAAFIMDGREHLVCLHE-PTG------DESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAV---------LGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPALGGLVEALGAKMERVSVAGLCRSEKAML-RNMAQDVAYLRWPVPRLACLLPAYDGL---LTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVSHPSRGI--GVGVVRLV-----PAEGVSYE*LKEAIRGFEVASVQGKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVG 2920
WL+ L RVPG VL+V TH D F + VEE + R E ++ ++ +G + D G+ L +++ +S + DL+ RL G FP++ +P + A + A+ GAD +G++R A+ D K+ +FV + A+ +++K ++ + GE +R + A+ +A G +L+ A ++H++PS L+R ++D RL DP Q Q ++ + S P L+ + HK F++ G ++ DYL+FLW + +L S + E LL R V D A FV D +YV A + G D IL G+A I + LV H P G R E + + V FA L L R C+ R G + D++ + + +V E + LG + R+ E++E T++ DS ++L D+ RD + + K M+ R+M QDVA+LRWP+PRL C+LPA + L E DR F W+ LR+WC GK+ GKG R LR+FFLC D SLAECGP GQGYEV E+L W KK P A++G AL SIAL C GL +P + L GGA+S E + S V G + G+ G G P +G +YE LKE I+ FEV ++G+S PS FD M LVDRGGRG E AWVRT N+DQF G
Sbjct: 464 WLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETE-LGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYS------FPSVRSVVPEPYLPAIATLEAVRRGAD----LRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRR----IFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQ----QAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEA----------SQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHA-------------FVPD---RYVVASCLPN-KAGLNVDPGKILEL--KMGSA-IYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVC---FAFKNHLVLLYEVRAIDGTSWIECHAR---GNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLV-RSGESEE---------TVISS--DSDHKALLERIVDVLRDQM----------------------------NVKFMMDRSMRQDVAFLRWPIPRLVCVLPAPESRAKPLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVDFEATLGTVAGGALSKFAEESLNSGIESVASIAGERLDGGRAEGLPQGAGAHGAQQGWPSPVQGFTYETLKEVIKSFEVDGMRGRSPFPS---FDAKMHLVDRGGRGEEWAWVRTKNIDQFAG 1248
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 231 bits (590), Expect = 4.040e-59 Identity = 256/904 (28.32%), Postives = 371/904 (41.04%), Query Frame = 2
Query: 482 WLDALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELGTVVEEHLEMKRFEWE-------AENKAIQRNPRNQGFSVDR----IGSTPSLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEGADPVVAAALTGKSRVAI-------DGHKKVNFVTWEVALEMWSKV--------VSALGLS-------GEIGEDIGEQQRGED----RVLKEALTMRQAGGTVL---------------VACG--------LVHLDPSWINLLLRELLDHRLADPAQVSWWQGQLADYCRRNGSRFPELIAVHKNFLRTGRLTSDYLRFLWRKVHELANPQVFGRMISTMSMYGAMFRCDPSSTETKELLLLPSRLPATVEDDTLAELKSAILSGIRMQFVIDIYAKYVPAGIIAQFLGGFFRDSRIILRACWNRGAAFIMDGREHLVCLHEPTGDESARIEVNVAGSTRETVSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLD------PALG--------GLVEALGAKMERVS-VAGLCRSE---KAML-RNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVSHPSRGI--GVGVVRL-------VPAEGVSYE*LKEAIRGFEVASVQGKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVG 2920
WLD L RVPG +L+V TH D F + VE+ MKR + AE + +R+P +G R + LTL + +S L+ RL G F ++ +P + V A + A+ GAD +G +R A+ D K+ +FV + A+ + K VS L S G D R+ A+ +A G +L V G ++H++PS L+R ++D RL DP Q + +A C L HK F++ G ++ DYL+FLW + EL P P + + + + ++L M V D + +VP R ++ +C A P D +E+ AGS A+ + + + P PR L+ + ++ A K V A + +E ++ + G + D S R+ +DI E ++ P LG LV + G V + + R + K M+ R++ QD+A+LRWP+PRL C+LPA + L E DR F W+ LR+WC GGK+KGKG R LRLFFLC D SLAECGP GQGYEV E+L W KK PLAK+GLAL S A CTGL +P ++ L GGA+ST VE+ + S G + G + + GVG R P + +Y+ LKE I+ FEVA+++ +S PS FD M+LVDRGG+G E +WVRT N+DQFVG
Sbjct: 169 WLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKI--MKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTLD--LTSSDWEDIGLLQRRLEHLAYNGYDGYS------FSSVRSVVPEPYLPVIATLEAVRLGAD----LRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAA-CPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQAS-------------------------------PEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVP--------------DRYVVASCLPNKAG--------------PEVDPGKMLELK-AGS--------------AVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACW---KRGVCFAFKNHMVLLYEVRDTAGNSWIECHARGSMFDE---SARTALNDIGDQVNELINDRKYGFPGLGLIRGESEEALVSSDGDHEALVKRIVNMLRDQMNVKFMMDRSIKQDLAFLRWPIPRLVCVLPAPESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIPEADFEATLGTKAGGALSTFVEDSLNSGGESMASIAGERLDGGTADELLQGVGAQRFGAQQGWPSPVQAFAYDALKEVIKRFEVANMRDRSPFPS---FDVKMRLVDRGGQGAEWSWVRTKNIDQFVG 974
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 225 bits (574), Expect = 3.860e-57 Identity = 124/255 (48.63%), Postives = 155/255 (60.78%), Query Frame = 2
Query: 2204 MLRNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVISLGNQVRGRDGVVSVS-------------HPSRGIGVGVVRLVPAEGVSYE*LKEAIRGFEVASVQGKSRRPSVLTFDRTMQLVDRGGRGVE*AWVRTANVDQFVG 2920
M R+M QDVA+LRWP+PRL C+LPA + L E DR F W+ LR+WC GGK+ GKG R LR+FFLC D S+AECGP GQGYEV E+++W KK P AK+GLAL SIAL C GL +P + L GGA+ST E + S G + V S++ H + G G P +G++YE LKE I+ FEV ++ +S PS FD M+LVDRGGRG E AWVRT N+DQFVG
Sbjct: 716 MDRSMRQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHS------GVESVASIAGDRLDGGRAEGLPHGAGGHGAQQEWPSPMQGITYETLKEVIKSFEVDGMRHRSPFPS---FDVKMRLVDRGGRGAEWAWVRTKNIDQFVG 961
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE) HSP 1 Score: 119 bits (298), Expect = 6.680e-25 Identity = 92/288 (31.94%), Postives = 129/288 (44.79%), Query Frame = 2
Query: 1790 VSNHGFAVMEALCALLMDRYPGLMLDPSCYPRFLSGQEAWDENLAALQRHLKGRVDEAVLGKISRAWETKEVTARENLTSTILGGIDDSISRSLRSLRHDIERDAVERLDPALGGLVEALGAKMERVSVAGLCRSEKAMLRNMAQDVAYLRWPVPRLACLLPAYDG---LLTEHDRGFHIWTCRLRSWCRGGKKKGKGKFRRYLRLFFLCASDFSLAECGPDGQGYEVKEVLDWVKKVQPLAKLGLALGSIALSTCTGLRLPASNIITALEETVGGAVSTVVENHVIS 2644
VS GF ++ LL YPGL LD S P G+EAW ++L L+ +DEA+ ++SR P G ++ L A + GL ++E+ +L ++AQ+VA++RWP+PRL LL A D LT R C + KG+ R LRLFF + +SLA CGP G V E+L+W KK + AK+GLA+ SIAL C GL +P ++ A + G V+ VVE S
Sbjct: 130 VSKVGFRAKGSMEQLLEQYYPGLQLDASADPTEGEGKEAWQDSLKGLRGTESLGLDEALANRLSR---------------------------------------------PRAGMQLDEL-APTSGAGIGGLNQTERNVLTSIAQNVAFMRWPIPRLVWLLLAPDSGEPALTAEQR------------C--NQAKGRRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIALKVCIGLAIPRMDLNAAFGASTGDVVTGVVEEAATS 355
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 63.2 bits (152), Expect = 3.380e-6 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 3
Query: 315 PCSAAGLEVVMWDFAGHADYYSTHQLFLTDGALHLLVVDLYKFHRN 452
P L+V +WDFAG ADYYS+HQLFLT GAL LLVVDL+ F +
Sbjct: 325 PGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKE 370
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: A0A6H5LNE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE2_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.360e-5 Identity = 59/184 (32.07%), Postives = 75/184 (40.76%), Query Frame = 2
Query: 488 DALLCRVPGCAVLIVATHADDFGGDQDGVAAALAELG-------------------TVVEEHLEMKRF----------------EW------EAENKAIQRNPRNQGFSVDRIGSTP-SLTLCGIIEASGCRSPDLISLRLNIAELGSEKGKRRDGTRLFPNIGQPIPVSWARVWAAVGALYEG 913
D+LLCRVPG AVL+VAT A+ F D A+ L L TV L RF +W + +A Q N S +R S P SL LC I G S L SL+ I ++ E G FP++ Q +P SW RVWA + AL+ G
Sbjct: 11 DSLLCRVPGSAVLVVATRANPFA-DNSKRASTLESLEEQSRRTWSEKRRYVSSLLRTVASVALPGSRFLKHCSSCISTILLCSQQWLTAETIKNRQRAFQGGGSNANSSSERPPSPPPSLWLCRFISICGRSSDGLASLKKKIYDVIMEPGTDNFA---FPHLRQHVPNSWRRVWAVMSALHVG 190
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 7.430e-5 Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 3
Query: 333 LEVVMWDFAGHADYYSTHQLFLTDGALHLLVVDLYKFHRNPFRRG-----GAIY 479
L V +WDF+G +DY+++HQ+FLT+GAL LLVVDL++ R+ G GAIY
Sbjct: 473 LAVSLWDFSGQSDYHASHQIFLTEGALFLLVVDLFELGRDEKSAGIPDPRGAIY 526 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5968.13617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5968.13617.1 >prot_H-paniculata_contig5968.13617.1 ID=prot_H-paniculata_contig5968.13617.1|Name=mRNA_H-paniculata_contig5968.13617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=712bp MKRFEWEAENKAIQRNPRNQGFSVDRIGSTPSLTLCGIIEASGCRSPDLIback to top mRNA from alignment at H-paniculata_contig5968:2601..8885+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5968.13617.1 ID=mRNA_H-paniculata_contig5968.13617.1|Name=mRNA_H-paniculata_contig5968.13617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6285bp|location=Sequence derived from alignment at H-paniculata_contig5968:2601..8885+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5968:2601..8885+ >mRNA_H-paniculata_contig5968.13617.1 ID=mRNA_H-paniculata_contig5968.13617.1|Name=mRNA_H-paniculata_contig5968.13617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4272bp|location=Sequence derived from alignment at H-paniculata_contig5968:2601..8885+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |