prot_H-paniculata_contig5966.13615.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5966.13615.1
Unique Nameprot_H-paniculata_contig5966.13615.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
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BLAST of mRNA_H-paniculata_contig5966.13615.1 vs. uniprot
Match: D7FMH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH3_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.260e-15
Identity = 66/159 (41.51%), Postives = 75/159 (47.17%), Query Frame = 0 
Query:   27 FDDYDEEEVAELEEYLKAHPSKAEDREALRQRAKELSASINMSKKPAPESSAIDISGVERITDASALRRGDMAGG----------ARASSSTMPGEAKREYTDASGKLKFNKRMPVDASGGTATQAAGSETGKREKKKARLGKLAKANTKLLSFGDDED 175
            F+DYDEEEVA LE Y+K HPSK ED+EALR+RA+ELSASI   +                    S  + G  AGG                    E   EYTDASGKLKFNKR PV A+ G                         +N KLLSFGDDED
Sbjct:   39 FEDYDEEEVAALEAYMKTHPSKEEDKEALRKRARELSASIGSGQ-------------------GSEAKGGRTAGGNXXXXXXXXXXXXXXXXXXXEEPIEYTDASGKLKFNKR-PVSAAAGGXXXXXXXXXXXXXXXXXXXXXXXXSNAKLLSFGDDED 177
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BLAST of mRNA_H-paniculata_contig5966.13615.1 vs. uniprot
Match: A0A6H5KEF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF2_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.590e-7
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:   27 FDDYDEEEVAELEEYLKAHPSKAEDREALRQRAKELSASI 66
            F+DYDEEEVA LE Y+K HPSK ED+EALR+RA+ELS SI
Sbjct:  103 FEDYDEEEVAALEAYMKTHPSKEEDKEALRKRARELSVSI 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5966.13615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMH3_ECTSI1.260e-1541.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEF2_9PHAE1.590e-775.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5966contigH-paniculata_contig5966:5417..7300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5966.13615.1mRNA_H-paniculata_contig5966.13615.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5966 4710..7321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5966.13615.1 ID=prot_H-paniculata_contig5966.13615.1|Name=mRNA_H-paniculata_contig5966.13615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MSGKIPRGSMTEAMGAGSSGGSGGGAFDDYDEEEVAELEEYLKAHPSKAE
DREALRQRAKELSASINMSKKPAPESSAIDISGVERITDASALRRGDMAG
GARASSSTMPGEAKREYTDASGKLKFNKRMPVDASGGTATQAAGSETGKR
EKKKARLGKLAKANTKLLSFGDDEDE*
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