prot_H-paniculata_contig5963.13610.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5963.13610.1
Unique Nameprot_H-paniculata_contig5963.13610.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
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BLAST of mRNA_H-paniculata_contig5963.13610.1 vs. uniprot
Match: D8LSN2_ECTSI (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN2_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.230e-25
Identity = 69/135 (51.11%), Postives = 75/135 (55.56%), Query Frame = 0 
Query:    1 MSEQVYVAWLLGGGAAREAKAK----------------EQATGAEAGAGVDAGDLAEERSTLSPDTSYMAELGAWGVVQECLDAYHQRRSAT----------GGATGAGSPLELPRVVSLLPEAGPSLLSAYETR 109
            MS+Q YV WLLGGGAA E                    ++A+G +A           ERSTLSPDTSYMAE GAW VVQ CLD YHQRRS            G A  AGS   LPR V LLPEAGP+LLSAYE R
Sbjct: 1087 MSQQAYVTWLLGGGAAEEXXXXXXXXXXXXXXXXXXXXDRASGGKA---------YTERSTLSPDTSYMAEAGAWSVVQACLDEYHQRRSVAVATGSGNADGGSAATAGSTEMLPRAVGLLPEAGPALLSAYEAR 1212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5963.13610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN2_ECTSI2.230e-2551.11Conserved oligomeric Golgi complex subunit 5 n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5963contigH-paniculata_contig5963:10054..11089 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5963.13610.1mRNA_H-paniculata_contig5963.13610.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5963 10054..11089 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5963.13610.1 ID=prot_H-paniculata_contig5963.13610.1|Name=mRNA_H-paniculata_contig5963.13610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MSEQVYVAWLLGGGAAREAKAKEQATGAEAGAGVDAGDLAEERSTLSPDT
SYMAELGAWGVVQECLDAYHQRRSATGGATGAGSPLELPRVVSLLPEAGP
SLLSAYETR
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