prot_H-paniculata_contig59600.13606.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59600.13606.1
Unique Nameprot_H-paniculata_contig59600.13606.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
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BLAST of mRNA_H-paniculata_contig59600.13606.1 vs. uniprot
Match: A0A6H5J8S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S1_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.080e-6
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    1 LLHGPAQVITGSQQGLPLTAVGEVAGAFGAVVGTSVLATKAQASTARTR 49
            LL    +VITGSQ GLPL AV EVA AFG VVGTS LATKAQ   A T+
Sbjct:  177 LLKQVLKVITGSQHGLPLQAVKEVAAAFGTVVGTSKLATKAQVWKAVTK 225
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BLAST of mRNA_H-paniculata_contig59600.13606.1 vs. uniprot
Match: D7FTR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR0_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 2.490e-5
Identity = 29/42 (69.05%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    1 LLHGPAQVITGSQQGLPLTAVGEVAGAFGAVVGTSVLATKAQ 42
            LL    +VITGSQ GLPL AV EVA  FG  VGTS LATKAQ
Sbjct:  192 LLKQVLKVITGSQHGLPLQAVKEVAATFGTAVGTSKLATKAQ 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59600.13606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8S1_9PHAE1.080e-667.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTR0_ECTSI2.490e-569.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59600contigH-paniculata_contig59600:663..830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59600.13606.1mRNA_H-paniculata_contig59600.13606.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59600 663..830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59600.13606.1 ID=prot_H-paniculata_contig59600.13606.1|Name=mRNA_H-paniculata_contig59600.13606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
LLHGPAQVITGSQQGLPLTAVGEVAGAFGAVVGTSVLATKAQASTARTRG
YFRQH*
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