prot_H-paniculata_contig59600.13605.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59600.13605.1
Unique Nameprot_H-paniculata_contig59600.13605.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
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BLAST of mRNA_H-paniculata_contig59600.13605.1 vs. uniprot
Match: D7FTR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR0_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.100e-18
Identity = 58/126 (46.03%), Postives = 68/126 (53.97%), Query Frame = 0 
Query:    1 MDTITGKHVGFPESELTILFGFFRTPM---PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGS-GRASDSGT-------GAYGADWTVAVACLWLLARPKGPVLSAIRGVFEVFARAAADRV 115
            +D ITGKH GFPESEL  LFGFFR PM   P+                                 G+ GRA  SG+       GA GADWT+AVACL LLA+PK PV +A+ GVF+VFARA  DR+
Sbjct:  235 VDNITGKHEGFPESELNTLFGFFRRPMAPGPATATTFSEENRDKFPQSQQRGGVGTNNSRPRTSPGNFGRAGKSGSRGGKEKDGAQGADWTMAVACLRLLAKPKEPVKAAVLGVFDVFARARGDRM 360
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59600.13605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTR0_ECTSI1.100e-1846.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59600contigH-paniculata_contig59600:1..345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59600.13605.1mRNA_H-paniculata_contig59600.13605.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59600 1..348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59600.13605.1 ID=prot_H-paniculata_contig59600.13605.1|Name=mRNA_H-paniculata_contig59600.13605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MDTITGKHVGFPESELTILFGFFRTPMPSPCSSSLSSSSNSAAATASSTT
ATGRGRRARRRLGSGRASDSGTGAYGADWTVAVACLWLLARPKGPVLSAI
RGVFEVFARAAADRV
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