prot_H-paniculata_contig59598.13602.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59598.13602.1
Unique Nameprot_H-paniculata_contig59598.13602.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 2.920e-27
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MELMGTLDTLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIGKWSCQP 83
            ++L+G L+ LP  RR+G+LEWCV RQ  GFQGR NK  D+CCSFWVGATL LL    LVD  RAR FH+SCQNR+ G ++  P
Sbjct:  213 LKLLGVLEKLPIPRRQGILEWCVNRQGVGFQGRPNKPEDSCCSFWVGATLALLDGLDLVDDGRARQFHVSCQNRICGGFAKAP 295          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: A0A8K0P2M1_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0P2M1_LADFU)

HSP 1 Score: 88.6 bits (218), Expect = 5.890e-19
Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MELMGTLDT-LPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIGKWS 80
            + LMG L+T L S +  GL  WC+ RQ  GFQGR NK +DTC SFWVGATL LLG +HL+D  + +   LS Q+  IG +S
Sbjct:  223 LSLMGQLETCLSSKQLNGLRRWCISRQMSGFQGRPNKPVDTCYSFWVGATLKLLGVYHLIDYDQNKELLLSSQDSTIGGFS 303          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: A0A6B2L8R2_9EUKA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8R2_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 1.900e-18
Identity = 45/86 (52.33%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 MELMGTLDTLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIG--KWSCQPA 84
            + LMG LD LP   ++ L +W + RQE GF GR NK  DTC SFWVGA+L +LG +HLVD    R + LSCQ +  G  KWS Q A
Sbjct:  209 LALMGRLDELP--HKDKLTKWLIFRQEQGFNGRPNKIQDTCYSFWVGASLKILGAYHLVDEQNTRKYTLSCQKKNGGFAKWSSQSA 292          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: A0A6P9AFI5_THRPL (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9AFI5_THRPL)

HSP 1 Score: 86.7 bits (213), Expect = 2.900e-18
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MELMGTL-DTLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIGKWS 80
            + LMGTL  +L   + EGL  WC+ RQE GFQGR NK +DTC SFW+GATL ++  + L+D    R F ++ Q+ +IG +S
Sbjct:  217 LSLMGTLHSSLSQKQLEGLRRWCLMRQESGFQGRPNKPVDTCYSFWIGATLKIIDSYELIDKAENRNFIMATQSNIIGGFS 297          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: UPI0014257D88 (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257D88)

HSP 1 Score: 86.7 bits (213), Expect = 3.090e-18
Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    3 LMGTLD-TLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIGKWSCQP 83
            LMG L+ TL   + E L  WC++RQ+ GFQGR NK +DTC SFWVGATL LL  FHLVD    R + LS Q+  +G +S  P
Sbjct:  223 LMGKLESTLSQKQLEKLKRWCIQRQQSGFQGRPNKPVDTCYSFWVGATLKLLDMFHLVDFNCNRTYILSTQDETMGGFSKWP 304          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: UPI001ED88C98 (geranylgeranyl transferase type-1 subunit beta n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88C98)

HSP 1 Score: 85.5 bits (210), Expect = 8.160e-18
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MELMGTLD-TLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIGKWS 80
            + LMG L+  L   + +GL  WC+ RQ  GFQGR NK +DTC SFWVGATL LLG FHLVD  + + + LS Q+ + G +S
Sbjct:  224 LSLMGQLEGNLSEKQIDGLKRWCIYRQISGFQGRPNKPVDTCYSFWVGATLKLLGIFHLVDYQQNKDYLLSTQDPITGGFS 304          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: A0A6J1SPJ8_FRAOC (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SPJ8_FRAOC)

HSP 1 Score: 84.7 bits (208), Expect = 1.490e-17
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 MELMGTLDTLPSNRR-EGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIG---KWS 80
            + LMGTL T+ S R+ +GL  WC+ RQE GF GR NK +DTC SFWVGATL +L  + L++ +  R F L+ Q+ + G   KW+
Sbjct:  217 LSLMGTLHTMLSTRQLDGLRRWCMMRQESGFNGRPNKPVDTCYSFWVGATLKILDCYDLINKSENRSFTLATQDNITGGFAKWT 300          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: A0A7J7KDD4_BUGNE (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KDD4_BUGNE)

HSP 1 Score: 83.6 bits (205), Expect = 6.050e-17
Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    3 LMGTLDTLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIG---KWS 80
            L   LD+L       L +WC+KRQE GFQGR NK IDTC SFW+GATL +L  F  VD +  R + LS Q+ V+G   KW+
Sbjct:  220 LFNRLDSLKPVELSLLKQWCLKRQESGFQGRPNKPIDTCYSFWIGATLRILDSFQFVDTSANRKWLLSVQDNVVGGFGKWT 300          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: UPI0014555ED7 (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014555ED7)

HSP 1 Score: 83.2 bits (204), Expect = 6.370e-17
Identity = 42/82 (51.22%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    3 LMGTLD-TLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIG---KWS 80
            LMG LD T    ++E +  WC+KRQ  GFQGR NK +DTC SFWVGATL LL  +  VD +  R F LS Q+  +G   KW+
Sbjct:  236 LMGRLDSTFNKRQQERIKSWCIKRQHSGFQGRPNKPVDTCYSFWVGATLKLLNAYEFVDFSCNRGFILSTQDDTVGGFAKWT 317          
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Match: UPI0018D8DD40 (geranylgeranyl transferase type-1 subunit beta-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8DD40)

HSP 1 Score: 83.2 bits (204), Expect = 6.410e-17
Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    3 LMGTLDTLPSNR-REGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATLILLGEFHLVDATRARPFHLSCQNRVIG---KWS 80
            LMG L++  S R RE +  WC+KRQ  GFQGR NK +DTC SFWVGATL LL  +  VD    R + LS Q+ ++G   KW+
Sbjct:  237 LMGRLESTFSKRQREKIKTWCIKRQHSGFQGRPNKPVDTCYSFWVGATLKLLNGYDFVDCACNRSYILSTQDEMVGGFAKWA 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59598.13602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q8_ECTSI2.920e-2760.24Geranylgeranyltransferase type 1 beta n=1 Tax=Ecto... [more]
A0A8K0P2M1_LADFU5.890e-1953.09Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A6B2L8R2_9EUKA1.900e-1852.33Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A6P9AFI5_THRPL2.900e-1848.15Geranylgeranyl transferase type-1 subunit beta n=1... [more]
UPI0014257D883.090e-1853.66geranylgeranyl transferase type-1 subunit beta-lik... [more]
UPI001ED88C988.160e-1851.85geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A6J1SPJ8_FRAOC1.490e-1748.81Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A7J7KDD4_BUGNE6.050e-1750.62Geranylgeranyl transferase type-1 subunit beta n=1... [more]
UPI0014555ED76.370e-1751.22geranylgeranyl transferase type-1 subunit beta-lik... [more]
UPI0018D8DD406.410e-1751.22geranylgeranyl transferase type-1 subunit beta-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 1..86
e-value: 4.2E-23
score: 83.8
NoneNo IPR availablePANTHERPTHR11774:SF4GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETAcoord: 12..79
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 12..79
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 7..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59598contigH-paniculata_contig59598:158..842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59598.13602.1mRNA_H-paniculata_contig59598.13602.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59598 131..842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59598.13602.1 ID=prot_H-paniculata_contig59598.13602.1|Name=mRNA_H-paniculata_contig59598.13602.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MELMGTLDTLPSNRREGLLEWCVKRQECGFQGRVNKAIDTCCSFWVGATL
ILLGEFHLVDATRARPFHLSCQNRVIGKWSCQPARCT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase