prot_H-paniculata_contig5956.13600.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5956.13600.1
Unique Nameprot_H-paniculata_contig5956.13600.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig5956.13600.1 vs. uniprot
Match: D7FP36_ECTSI (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP36_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.060e-28
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    2 LPDGKSMYSFLCPSSCSDQHFKNESVTIIGHSLYMHGTGQHMLVQQFR-----NDVVVDTVKVEYFSIDQGGVFASMTDGTKTIERGDRFETRCYYDTAYGEYPGERVRFGPRSEDEM 114
            LPDGKS +SF CPS+C++ HF+ E VT+  H L+MH  GQ ML +Q+R     N+V++ T  VEY+S  Q G      + + TI++GD F T C+YDT+Y       V FG  SE+EM
Sbjct:   18 LPDGKSTFSFGCPSTCTETHFEEEEVTVFSHLLHMHENGQRMLTRQYRTDSDGNEVLLHTADVEYYSFLQAGAHVVSVNDSTTIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEM 135          
BLAST of mRNA_H-paniculata_contig5956.13600.1 vs. uniprot
Match: D7FP38_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP38_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 5.010e-26
Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    2 LPDGKSMYSFLCPSSCSDQHFKNESVTIIGHSLYMHGTGQHMLVQQFRND-----VVVDTVKVEYFSIDQGGVFASMTDGTKTIERGDRFETRCYYDTAYGEYPGERVRFGPRSEDEM 114
            LPDGKS+YSF CP +C++ +F+ E VT+  H L+MH  GQ +  +Q+RND     V++ T +VEY+S  Q GV     + + TI++GD F T CYYDT+Y       V +G  SE+EM
Sbjct:  391 LPDGKSVYSFGCPGTCTETYFEEEEVTVFSHLLHMHENGQRISTRQYRNDGDGNEVLIHTAEVEYYSFLQAGVHVVTVNDSTTIKKGDVFTTECYYDTSYSSVGSPNVTWGLGSENEM 508          
BLAST of mRNA_H-paniculata_contig5956.13600.1 vs. uniprot
Match: D8LD47_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD47_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 8.760e-25
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 0
Query:    2 LPDGKSMYSFLCPSSCSDQHFKNESVTIIGHSLYMHGTGQHMLVQQFRNDV-----VVDTVKVEYFSIDQGGVFASMTDGTKTIERGDRFETRCYYDTAYGEYPGERVRFGPRSEDEM 114
            LP+GKS   F CP +C++ +F+ ESVT+  H L+MH  GQ M  +Q+RND      +VD  +VEY+S  Q G   +  +G+  I++GDRFET CYYDT+        V FG  SE EM
Sbjct:  400 LPEGKSSVEFDCPGACTETYFEAESVTVYSHFLHMHENGQRMETRQYRNDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQKGDRFETTCYYDTSLSSVDSTNVTFGEGSEQEM 517          
BLAST of mRNA_H-paniculata_contig5956.13600.1 vs. uniprot
Match: A0A6H5K5A3_9PHAE (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A3_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 2.730e-18
Identity = 50/142 (35.21%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    2 LPDGKSMYSFLCPSSCSDQHFKNESVTIIGHSLYMHGTGQHMLVQQFR-----NDVVVDTVKVEYFSIDQGGVFASMTDGTKTIE------------------------RGDRFETRCYYDTAYGEYPGERVRFGPRSEDEM 114
            LP+GKS   F CP  C++ + + ESVT+  H L+MHG GQ M  +Q+R     N+ +VD  +VEY+S  Q G   +  +G+  I+                        +GD FET CYYDT+        V FG  SE+ M
Sbjct:   82 LPEGKSSVEFDCPGVCTETYLEAESVTVYSHFLHMHGNGQRMETRQYRSDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQYIHYLLPPNAFVLPCLAFVSVFLQKGDSFETTCYYDTSLSSVDSTNVTFGEGSEEGM 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5956.13600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FP36_ECTSI1.060e-2845.76Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
D7FP38_ECTSI5.010e-2644.92DOMON domain-containing protein n=2 Tax=Ectocarpus... [more]
D8LD47_ECTSI8.760e-2544.92DOMON domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K5A3_9PHAE2.730e-1835.21Cu2_monoox_C domain-containing protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024548Copper type II ascorbate-dependent monooxygenase, C-terminalPFAMPF03712Cu2_monoox_Ccoord: 10..114
e-value: 4.0E-9
score: 36.2
IPR014784Copper type II, ascorbate-dependent monooxygenase-like, C-terminalGENE3D2.60.120.230coord: 2..114
e-value: 6.6E-7
score: 30.7
IPR008977PHM/PNGase F domain superfamilySUPERFAMILY49742PHM/PNGase Fcoord: 8..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5956contigH-paniculata_contig5956:3208..4185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5956.13600.1mRNA_H-paniculata_contig5956.13600.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5956 1804..4245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5956.13600.1 ID=prot_H-paniculata_contig5956.13600.1|Name=mRNA_H-paniculata_contig5956.13600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MLPDGKSMYSFLCPSSCSDQHFKNESVTIIGHSLYMHGTGQHMLVQQFRN
DVVVDTVKVEYFSIDQGGVFASMTDGTKTIERGDRFETRCYYDTAYGEYP
GERVRFGPRSEDEM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024548Cu2_monoox_C
IPR014784Cu2_ascorb_mOase-like_C
IPR008977PHM/PNGase_F_dom_sf