prot_H-paniculata_contig5954.13597.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5954.13597.1
Unique Nameprot_H-paniculata_contig5954.13597.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length243
Homology
BLAST of mRNA_H-paniculata_contig5954.13597.1 vs. uniprot
Match: A0A6H5K4J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J9_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 2.750e-30
Identity = 74/142 (52.11%), Postives = 86/142 (60.56%), Query Frame = 0
Query:   67 FLIDVSKANSDLSGLKSSDAGAAGRALTAEEVQLLESYGNWATDWSLVRLSGRSAAGR----IAVERVRGNCFHGPVLLGDFAGEIRLPGAEHSPQPCGVYGSTLSWCIIGDGCLVKGCSXXXXXXXXXXXXXXXXXXVSCS 204
            FL DV+ A    +GL+S      GR LT+EEV+ L+ +GNWAT+WSLVR+S  S        IA  RVRG  FHGPVLLGDF+GEI LP AE   QPCGVY STLSW ++GDG LVKGC                   VSCS
Sbjct:   26 FLEDVAAARGVYAGLQSE-----GRGLTSEEVRKLQVHGNWATNWSLVRVSEGSGPSETKSSIAAGRVRGCVFHGPVLLGDFSGEIILPVAEQYSQPCGVYNSTLSWVVVGDGALVKGCHAMTRCVVGPGAAVINCGLVSCS 162          
BLAST of mRNA_H-paniculata_contig5954.13597.1 vs. uniprot
Match: D7FSJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ4_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.310e-28
Identity = 68/117 (58.12%), Postives = 80/117 (68.38%), Query Frame = 0
Query:   67 FLIDVSKANSDLSGLKSSDAGAAGRALTAEEVQLLESYGNWATDWSLVRLSGRSAAGR----IAVERVRGNCFHGPVLLGDFAGEIRLPGAEHSPQPCGVYGSTLSWCIIGDGCLVK 179
            FL D + A    +GL+S      GR LT+EEV+ LE +GNWATDWSLVR+S  S + +    I   RVRG  FHGPVLLGDF+GEI LP AE   QPCGVY STLSW I+GDG L+K
Sbjct:   26 FLQDAAAARGVYAGLQSE-----GRGLTSEEVRELEVHGNWATDWSLVRVSKGSGSSKTTSSIGAGRVRGCVFHGPVLLGDFSGEIILPVAEQYSQPCGVYNSTLSWSIVGDGALIK 137          
BLAST of mRNA_H-paniculata_contig5954.13597.1 vs. uniprot
Match: A0A7C0XTT9_9BACT (DUF4954 family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7C0XTT9_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 5.080e-6
Identity = 40/136 (29.41%), Postives = 61/136 (44.85%), Query Frame = 0
Query:   91 RALTAEEVQLLESYGNWATDWSLVRLSGRSAAGRIAVERVRGNCFHGPVLLGDFAGEIRLPGAEHSPQPCGVYGSTLSWCIIGDGCLVKGCSXXXXXXXXXXXXXXXXXXVSCSHGGTLPPNATGNANKVTADTGG 226
            R LTAEE++ L+ +GNWA DWS +++ G+        ERVR + F G V++G F   + + G      P G+Y ST+    I +  L+K                     ++C  G T      G    +  +TGG
Sbjct:   22 RPLTAEEIEQLKKFGNWAEDWSKIKV-GKD----FKPERVRNSFFFGEVIIGSFEKSVNVDGLI---LPSGIYRSTIVNSKIANNSLIKDVKFLANSIVCEEVVIMNVDEINCKKGSTF---GNGEELPIAIETGG 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5954.13597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4J9_9PHAE2.750e-3052.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSJ4_ECTSI1.310e-2858.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7C0XTT9_9BACT5.080e-629.41DUF4954 family protein n=2 Tax=Bacteria TaxID=2 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5954contigH-paniculata_contig5954:6033..12450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5954.13597.1mRNA_H-paniculata_contig5954.13597.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5954 6032..12450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5954.13597.1 ID=prot_H-paniculata_contig5954.13597.1|Name=mRNA_H-paniculata_contig5954.13597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
YSTAEAGGGEFEYRSRGDKCTCCTVPIVCTSKLGKRHIYYAAMECIGSSA
AATIASATTSTTTYSPFLIDVSKANSDLSGLKSSDAGAAGRALTAEEVQL
LESYGNWATDWSLVRLSGRSAAGRIAVERVRGNCFHGPVLLGDFAGEIRL
PGAEHSPQPCGVYGSTLSWCIIGDGCLVKGCSTVSRCIVRTGAVVVGCGV
VSCSHGGTLPPNATGNANKVTADTGGDGGGRGTKFGNGIIVVV
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