prot_H-paniculata_contig59525.13596.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig59525.13596.1
Unique Name	prot_H-paniculata_contig59525.13596.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	118

Homology

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A6A4ESP9_9STRA (Chromo domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ESP9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 9.390e-9
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 0

Query:    1 EVQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEH-QAQYNIERIGEVKKAEHRDD---HVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQL---KQQKLKQPLK 106
            +V+HLVTGE    H  R++F+ADK+LEVT       + LEH  AQ  I R+ E+ +    D    +   V W GL+  E +WE +S +  D SA+++A +   K  KL+  LK
Sbjct:    7 KVKHLVTGEELDVHASRLKFFADKDLEVTE------ELLEHVAAQGIILRVRELIRHRWNDQSRSNEVLVGWHGLEAIEDSWEPLSAIYKDVSALVQAYVASAKDSKLEHHLK 113

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A6A3LWQ0_9STRA (Chromo domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LWQ0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.950e-8
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 0

Query:    1 EVQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQA-QYNIERIGEVKKAEHRDD---HVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQL---KQQKLKQPLK 106
            +V+HLVTGE    H  R++F+ DK+LEVT       + LEH A Q  I R+ E+ +    D    +   V+W GL+  E +WE +S +  D S +++A +   K  KL++ LK
Sbjct:   67 KVKHLVTGEELDVHASRLKFFVDKDLEVTE------ELLEHMAAQGIILRVRELIRNRWNDQSRSYEILVWWHGLEAIEDSWEPLSAMYKDVSTLVQAYVASAKDSKLERHLK 173

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: W4GEH4_9STRA (Chromo domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GEH4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.820e-8
Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0

Query:    2 VQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQAQYNI----ERIGEVKKAEHRDDHVFRVYWQGLDEGESTWELVSKVLVDASAVLRA 94
            ++HLVT E R AH  R++ YA+   EVT       + LEH ++  I    + I   K      D + +V+W+G ++ ES+WE ++K++ +  AV++A
Sbjct:   67 LEHLVTHEEREAHTARVKMYAETSFEVTE------EILEHVSEQGIVSQVKSIAGDKFVPDVSDFMLKVFWEGFEDIESSWEPLNKLMRECPAVVKA 157

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A6A3HXT7_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HXT7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.440e-7
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0

Query:    1 EVQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEH-QAQYNIERIGEVKKAEHRDD---HVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQL---KQQKLKQPLK 106
            +V+HLVTGE    H  R++F+ADK+LEVT       + LEH  AQ  I R+ E+ +    D    +   V W GL+  E +WE +S +  D SA+++A +   K  KL++ LK
Sbjct:  618 KVKHLVTGEELDVHASRLKFFADKDLEVTE------ELLEHVAAQGIILRVRELIRHRWNDQSRSNEVLVGWHGLEAIEDSWEPLSAMYKDVSALVQAYVASAKDSKLERHLK 724

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A6G0MQU0_9STRA (Chromo domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MQU0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.440e-7
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0

Query:    2 VQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQAQYNIERIGEVKKAEHR-----DDHVFRVYWQGLDEGESTWELVSKVLVDASAVLRA 94
            +QHLVTG     H  R++FYAD  LEV        + LEH +   I    E  KA HR     DD+   V W+GL+E E ++EL++ +  D SA++ A
Sbjct:  132 IQHLVTGAEMDVHASRLKFYADDSLEVNE------ELLEHISAQGIILAVEKLKA-HRWNPDIDDYEILVQWKGLEEIEDSYELLTSLAKDVSALVTA 222

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: W2IAR5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2IAR5_PHYPR)

HSP 1 Score: 54.7 bits (130), Expect = 3.220e-6
Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 0

Query:    2 VQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQAQYNIE-RIGEVKKAEHR-----DDHVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQLKQQKLKQP 104
            ++HLVTG     H  R++FYADK L VT       + LEH A   I   I E+KK  HR      D+   V W+GL+  E +WEL++ +  +   +L   +++Q  K P
Sbjct:  637 IRHLVTGCELDVHESRLKFYADKNLNVTE------EILEHVASQGIILAINELKK--HRWNKSIKDYEVLVNWKGLESVEDSWELLTSLAKEVHVLLNQCIQKQGSKLP 737

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: W2PQB6_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PQB6_PHYPN)

HSP 1 Score: 54.7 bits (130), Expect = 3.290e-6
Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 0

Query:    2 VQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQAQYNIE-RIGEVKKAEHR-----DDHVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQLKQQKLKQP 104
            ++HLVTG     H  R++FYADK L VT       + LEH A   I   I E+KK  HR      D+   V W+GL+  E +WEL++ +  +   +L   +++Q  K P
Sbjct:  891 IRHLVTGCELDVHESRLKFYADKNLNVTE------EILEHVASQGIILAINELKK--HRWNKSIKDYEVLVNWKGLESVEDSWELLTSLAKEVHVLLNQCIQKQGSKLP 991

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A024TUZ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUZ8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.340e-6
Identity = 31/112 (27.68%), Postives = 62/112 (55.36%), Query Frame = 0

Query:    1 EVQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQAQ-YNIERIGEVKKAEHRDDHVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQLKQQKLKQPLKRALKA 111
            +V++LVTGE R AH IR++FYAD++L+++        ++ H ++ + +E I   +       +  ++ W+GL + E++WE    +  D   + +A  K++     +K+  KA
Sbjct: 1156 DVRNLVTGEQRPAHAIRLKFYADEDLQLSE---DFIDHVAHNSEGHEVEVIVSARYVPATKSYEVQIKWRGLRDVENSWEPAQNIQEDVPTMFKAFCKKRAKLAIVKKMAKA 1264

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A6A3GBI2_9STRA (Chromo domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GBI2_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 5.840e-6
Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 0

Query:    2 VQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEH-QAQYNIERIGEVKKAEHRDD---HVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQLKQQKLKQPLKRALKARYALT 116
            V+ LVTGE    H  R++F+ADK+LEVT       + LEH  AQ  I R+ E+ +    D+   +   V W GL+  E +WE ++ +  D S +++A +   K    L+R L+A  A T
Sbjct:   68 VKQLVTGEELDVHASRLKFFADKDLEVTE------ELLEHVAAQGIILRVRELVRHRWNDESRSYEILVGWHGLEAIEDSWEPLTAMYNDVSTLVQAYVATAK-DSKLERHLEALEAST 179

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BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Match: A0A6G0Q1F2_9STRA (Chromo domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q1F2_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.390e-5
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 0

Query:    2 VQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEH-QAQYNIERIGEVKKAEHRDD---HVFRVYWQGLDEGESTWELVSKVLVDASAVLRA 94
            V+ LVTGE    H  R++F+ADK+LEVT       + LEH  AQ  I R+ E+ +    D+   +   V W GL+  E +WE ++ +  D S +++A
Sbjct:   68 VKQLVTGEELDVHASRLKFFADKDLEVTE------ELLEHVAAQGIILRVRELVRHRWNDESRSYEILVGWHGLEAIEDSWEPLTAMYNDVSTLVQA 158

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig59525.13596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
A0A6A4ESP9_9STRA	9.390e-9	38.05	Chromo domain-containing protein (Fragment) n=1 Ta...	[more]
A0A6A3LWQ0_9STRA	3.950e-8	36.28	Chromo domain-containing protein n=3 Tax=Phytophth...	[more]
W4GEH4_9STRA	4.820e-8	32.99	Chromo domain-containing protein n=1 Tax=Aphanomyc...	[more]
A0A6A3HXT7_9STRA	1.440e-7	38.05	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6G0MQU0_9STRA	2.440e-7	38.78	Chromo domain-containing protein n=2 Tax=Phytophth...	[more]
W2IAR5_PHYPR	3.220e-6	35.78	Uncharacterized protein n=1 Tax=Phytophthora paras...	[more]
W2PQB6_PHYPN	3.290e-6	35.78	Uncharacterized protein n=3 Tax=Phytophthora paras...	[more]
A0A024TUZ8_9STRA	3.340e-6	27.68	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A6A3GBI2_9STRA	5.840e-6	35.29	Chromo domain-containing protein n=5 Tax=Phytophth...	[more]
A0A6G0Q1F2_9STRA	1.390e-5	36.08	Chromo domain-containing protein n=1 Tax=Phytophth...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.40		coord: 23..102 e-value: 3.1E-6 score: 28.9
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 45..106 score: 9.806
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 40..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig59525	contig	H-paniculata_contig59525:266..619 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig59525.13596.1	mRNA_H-paniculata_contig59525.13596.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig59525 266..619 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig59525.13596.1 ID=prot_H-paniculata_contig59525.13596.1|Name=mRNA_H-paniculata_contig59525.13596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
EVQHLVTGETRYAHVIRIRFYADKELEVTRLMTKVFQYLEHQAQYNIERI
GEVKKAEHRDDHVFRVYWQGLDEGESTWELVSKVLVDASAVLRAQLKQQK
LKQPLKRALKARYALTV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR016197	Chromo-like_dom_sf