mRNA_H-paniculata_contig5952.13594.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5952.13594.1
Unique NamemRNA_H-paniculata_contig5952.13594.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: A0A6H5JLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF8_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 8.530e-121
Identity = 267/459 (58.17%), Postives = 314/459 (68.41%), Query Frame = 3 
Query:  390 MEPDLYRALRAKDLKRVRDCLGDWDNKNRWIWWSGTGR---ALSPLHVASKGSSQDILAELLRHPQISCSINESTDKASV------TXXXXXXXXXXPEVVRLLLDAGADISSPSGDRSTAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-CAYLAAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVVELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGASLFKMDYDQALRIACFYGLVQEVESLLWMEADPNSVAANVRDRGLEFHLKVSPTIRDGVRELLADAVNDAQNADSV 1736
            MEPDLYRALRA+D++RVR+CL DW N+N+ +WW   G    AL+PLHVASKGSSQDIL ELL+HP+I  SIN  TDK +V      TXXXXXXXXXX     LLLDAGADISSPSGD STAF              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                              C  LA +SGRTELL+MML AM  SGQR RDGGG +LYD V+ GL KVV+LL++ RG+ELGVN++R NP K GTTPLHAA FRGQQ +V +LLSRGA+P+              A+PDS+ +VR LLK KADAN KD F C+PIYY FVRGNDD+V ++L+ GASLF+MD+DQALRIACFYG++ EVESLLWMEAD ++V  N RDRG  FH  V+P +RDG+ ELL+D+ + A + D+ 
Sbjct:    3 MEPDLYRALRARDIRRVRECLRDWGNENKRVWWGAGGAGSTALTPLHVASKGSSQDILRELLKHPEIGRSINTFTDKTNVGHAPFVTXXXXXXXXXXXXXXXLLLDAGADISSPSGDLSTAFHIACSRGRLETCVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAAVDANSNTALALSCRATGRLDAAKALLDGGADVLVENSDGCSCVSLAVISGRTELLDMMLAAMASSGQRFRDGGGDMLYDAVDHGLGKVVKLLTNVRGRELGVNINRPNPDKQGTTPLHAACFRGQQAIVAQLLSRGANPDAAXXXXXXXXXXXXASPDSEPMVRFLLKGKADANVKDNFGCSPIYYGFVRGNDDIVKFMLSHGASLFRMDFDQALRIACFYGMILEVESLLWMEADASAVLFNHRDRGTAFHPTVNPAVRDGINELLSDSNSGADDNDNA 461
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BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: D8LJE6_ECTSI (Ankyrin (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE6_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.000e-98
Identity = 244/454 (53.74%), Postives = 290/454 (63.88%), Query Frame = 3 
Query:  390 MEPDLYRALRAKDLKRVRDCLGDWDNKNRWIWWSGTGR---ALSPLHVASKGSSQDILAELLRHPQISCSINESTDKASVTXXXXXXXXXXPEVVRLLLDAGADISSPSGDRSTAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-CAYLAAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVVELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGASLFKMDYDQALRIACFYGLVQEVESLLWMEADPNSVAANVRDRGLEFHLKVSPTIRDGVRELLADA---VNDAQNAD 1730
            MEPDLYRALRA+D++RVR+CL DW N+++ +WW   G    AL+PLHVASKGSSQDIL ELL+HP+I  SIN  TDK +V XXXXXXXXXX     LLLDAGADISSPSGD STAF               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                              C  LAA+SGRTELL+MML AM  SGQR RDGGG +LYD V+ GL KV +LL++ RG+ELGVN++R NP K+G            +GL++   SR + P              C+            K KADAN KD F C+PIYY FVRGNDD+V ++L+ GASLF+MD+DQALRIACFYG++ EVESLLWMEAD ++V  N RDRG  FH  V+P +RDG+ ELL+D+    +D +NAD
Sbjct:    3 MEPDLYRALRARDIRRVRECLRDWGNESKRVWWGPGGAGSAALTPLHVASKGSSQDILRELLKHPEIGRSINTFTDKTNVXXXXXXXXXXXXXXXXLLLDAGADISSPSGDLSTAFHIACSRGRLETCVELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAAVDANSNTALALSCRATGRLDAAKALLDGGADVLVENSDGCSCVSLAAISGRTELLDMMLAAMASSGQRFRDGGGDMLYDAVDHGLGKVAKLLTNVRGRELGVNINRPNPDKTGDDA-------APRGLLSAGTSRWSGP--------------CS------------KGKADANVKDNFGCSPIYYGFVRGNDDIVKFMLSHGASLFRMDFDQALRIACFYGMILEVESLLWMEADASAVLFNHRDRGTAFHPTVNPAVRDGINELLSDSDSGADDNENAD 423
[Close]
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: A0A5D6XS69_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS69_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.230e-12
Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 3 
Query: 1032 AAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVVELGLVKVVQLLSSR----RGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFAC-ATPDSQAVVRSLLKAKADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGA 1508
            A + G  +++E++LDA    G        S L++       +++++L ++      Q +   V  QN    G TPLH A   G  G VT LL   A  +L N +G G LH AC     + AVV+ L+ A AD NA+D   C+PI  A  +   D++ +L + GA
Sbjct:   53 AIMKGHRDVVELLLDAGAEVGALKTPDRNSPLHEAAFRDEPEIIRVLLAKIQLKGNQSVSALVDLQNQF--GNTPLHIAARTGSVGCVTRLLEADAKVSLTNVNGSGPLHHACYCERPNLAVVKLLVAAGADVNARDEQGCSPIIIAAKKNQTDVIDFLRSHGA 214
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BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: UPI001EB01AD0 (inversin-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB01AD0)

HSP 1 Score: 75.5 bits (184), Expect = 9.590e-11
Identity = 61/225 (27.11%), Postives = 110/225 (48.89%), Query Frame = 3 
Query: 1032 AAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVVELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGASLFKMDYD--QALRIACFYGLVQEVESLLWMEADPNSVAANVRDRGLEFHLKVSPTIRDGVRELLA 1700
            AAV G  +++E+ L++       + + G +IL+     G ++ V+ + S       V+++R+   +   TP+  A   G + +   L+S+GAD +L +E G  +LHFAC     + V   L     D N++     TP+ +A ++GN D+V  L+++GA +  +D D    L  AC  G ++ VE +L +         ++  RGL     V      G R+++A
Sbjct:  104 AAVEGHRDVVEL-LESEGADVSLVDEDGYNILHFACIRGHLETVEFVLSLNE----VDINRRG--EGSKTPVMRAAELGHREVAGLLVSKGADVSLVDEDGYNTLHFACLGGHLETVEFVLSLNVVDINSRGLKSRTPVMWAAMKGNSDVVKLLVSKGADVSLVDVDGGNILHFACLGGQLETVEFVLSLNV------VDINSRGLRSRTPVMWATERGHRDVVA 315
[Close]
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: UPI00201E9132 (inversin-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E9132)

HSP 1 Score: 75.5 bits (184), Expect = 2.230e-10
Identity = 61/225 (27.11%), Postives = 110/225 (48.89%), Query Frame = 3 
Query: 1032 AAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVVELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGASLFKMDYD--QALRIACFYGLVQEVESLLWMEADPNSVAANVRDRGLEFHLKVSPTIRDGVRELLA 1700
            AAV G  +++E+ L++       + + G +IL+     G ++ V+ + S       V+++R+   +   TP+  A   G + +   L+S+GAD +L +E G  +LHFAC     + V   L     D N++     TP+ +A ++GN D+V  L+++GA +  +D D    L  AC  G ++ VE +L +         ++  RGL     V      G R+++A
Sbjct:  374 AAVEGHRDVVEL-LESEGADVSLVDEDGYNILHFACIRGHLETVEFVLSLNE----VDINRRG--EGSKTPVMRAAELGHREVAGLLVSKGADVSLVDEDGYNTLHFACLGGHLETVEFVLSLNVVDINSRGLKSRTPVMWAAMKGNSDVVKLLVSKGADVSLVDVDGGNILHFACLGGQLETVEFVLSLNV------VDINSRGLRSRTPVMWATERGHRDVVA 585
[Close]
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: A0A6H5I4V7_9HYME (alpha-1,2-Mannosidase n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I4V7_9HYME)

HSP 1 Score: 59.7 bits (143), Expect = 2.080e-5
Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 3 
Query: 1227 KSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQA-------VVRSLLKAKADANAKD-TFDCTPIYYAFVRGNDDLVHYLLARGA 1508
            ++   PL  AV  G+  L   LL  GADPNL N  G+  LH AC T             V   L    + NA+  TF  TP++ A + GN+++V YLL RGA
Sbjct:  178 RTDVRPLQLAVRNGRLDLTELLLVNGADPNLANRRGMTPLHVACRTGRGALDVVTRFFEVTDKLGRPVNVNARTPTFGRTPLHLAVLSGNEEVVVYLLGRGA 279
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BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: UPI000F558027 (ankyrin-1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F558027)

HSP 1 Score: 58.2 bits (139), Expect = 3.790e-5
Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 3 
Query: 1029 LAAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVVELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDT-FDCTPIYYAFVRGNDDLVHYLLARGA 1508
            +A  S + E  + +L+       +       IL     +G V  +++L SR     G ++  ++    G TPL  A   G   +V  LL++GA+P L N S LG LH A A  D+   ++++L    D NA  T    TP+ +   +G     +YLLA GA
Sbjct:  203 VAIKSDKLEAAKYLLEKGANESLKTTQREIPILSIASTVGSVAAIEMLLSR-----GCSIDSRDD--GGDTPLMHAARCGNTKVVEYLLAQGANPLLRNTSDLGLLHLA-ALSDNVLTIKAVLSKNLDINAMCTVLGITPLLFCLTQGKLQAANYLLAEGA 355
[Close]
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: A0A2P8XAE5_BLAGE (Uncharacterized protein (Fragment) n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XAE5_BLAGE)

HSP 1 Score: 58.9 bits (141), Expect = 4.180e-5
Identity = 41/139 (29.50%), Postives = 68/139 (48.92%), Query Frame = 3 
Query: 1107 DGGGSILYDVVELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDTFDC---TPIYYAFVRGNDDLVHYLLARGASL 1514
            D G ++L+     G + +  L+   +   + +   R+       TPLH AV  G+Q +V  LL   A+ N  + S    LH AC    +  ++++L+   A     D  +C   TP+Y A +  N+D+V YL+ +GASL
Sbjct: 1353 DDGNTLLHKACASGNLDITCLILKLKPLMINLKNKREE------TPLHLAVLHGRQHVVQYLLKMKANTNESDISRNTPLHIACTQGGNFEIIKNLVINNASI---DLINCNMETPLYLATLSRNNDVVEYLIEKGASL 1482
[Close]
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: A0A5N7ZAL5_FLASP (Ankyrin repeat domain-containing protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A5N7ZAL5_FLASP)

HSP 1 Score: 54.7 bits (130), Expect = 5.000e-5
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 3 
Query: 1278 LVTELLSRGADPNLGNESGLGSLHFACAT--PDSQAVVRSLLKAKADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGASL 1514
            L+ +L +   D N  NE G   LH AC +    ++ +V  LLK   D NA+   DCTP+YYA  +G++++V  L+  GA +
Sbjct:   14 LIDDLKNENIDLNQRNEFGNTPLHVACNSIYAINKEIVEVLLKHPLDINARGIDDCTPLYYAIGKGDNEVVQILIDNGADV 94
[Close]
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Match: A0A067MEG3_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MEG3_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 5.290e-5
Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 3 
Query: 1224 LKSGTTPLHAAVFRGQQGLVTELLSRGADPNLGNESGLGSLHFAC---ATPDSQAVVRSLLKAK-ADANAKDTFDCTPIYYAFVRGNDDLVHYLLARGA---SLFKMDYDQALRIA 1550
            + SGTTPL  A  RG    V  LL  GA+P+L N S    LHFA    + P     + +L++A  A  N  D    +P+ YAF+ G    V  L+  GA   S    D D A+ +A
Sbjct:  273 IHSGTTPLMYAAARGSSAAVLALLEAGANPSLLNSSDRSPLHFAAQLMSDPSGHEALNALIRAAPATLNLADANKISPLQYAFMYGPSPAVRLLVNAGAQHDSRTPFDNDFAVELA 388
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5952.13594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JLF8_9PHAE8.530e-12158.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJE6_ECTSI1.000e-9853.74Ankyrin (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A5D6XS69_9STRA7.230e-1232.32Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
UPI001EB01AD09.590e-1127.11inversin-like n=1 Tax=Haliotis rufescens TaxID=645... [more]
UPI00201E91322.230e-1027.11inversin-like n=1 Tax=Haliotis rufescens TaxID=645... [more]
A0A6H5I4V7_9HYME2.080e-538.24alpha-1,2-Mannosidase n=1 Tax=Trichogramma brassic... [more]
UPI000F5580273.790e-529.81ankyrin-1-like n=1 Tax=Pocillopora damicornis TaxI... [more]
A0A2P8XAE5_BLAGE4.180e-529.50Uncharacterized protein (Fragment) n=1 Tax=Blattel... [more]
A0A5N7ZAL5_FLASP5.000e-537.04Ankyrin repeat domain-containing protein n=1 Tax=F... [more]
A0A067MEG3_9AGAM5.290e-536.21Uncharacterized protein (Fragment) n=1 Tax=Botryob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5952contigH-paniculata_contig5952:2235..6819 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.2
Seed ortholog evalue2.7e-85
Seed eggNOG ortholog2880.D8LJE6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-06_010090.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2257
Cds size1866
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5952.13594.1prot_H-paniculata_contig5952.13594.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5952 2235..6430 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930655.048219-CDS-H-paniculata_contig5952:2234..29861622930655.048219-CDS-H-paniculata_contig5952:2234..2986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 2235..2986 -
1691481391.6308155-CDS-H-paniculata_contig5952:2234..29861691481391.6308155-CDS-H-paniculata_contig5952:2234..2986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 2235..2986 -
1622930655.0602772-CDS-H-paniculata_contig5952:3881..39321622930655.0602772-CDS-H-paniculata_contig5952:3881..3932Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 3882..3932 -
1691481391.6432636-CDS-H-paniculata_contig5952:3881..39321691481391.6432636-CDS-H-paniculata_contig5952:3881..3932Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 3882..3932 -
1622930655.0728498-CDS-H-paniculata_contig5952:4561..54021622930655.0728498-CDS-H-paniculata_contig5952:4561..5402Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 4562..5402 -
1691481391.6539457-CDS-H-paniculata_contig5952:4561..54021691481391.6539457-CDS-H-paniculata_contig5952:4561..5402Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 4562..5402 -
1622930655.0877485-CDS-H-paniculata_contig5952:6208..64301622930655.0877485-CDS-H-paniculata_contig5952:6208..6430Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 6209..6430 -
1691481391.6651719-CDS-H-paniculata_contig5952:6208..64301691481391.6651719-CDS-H-paniculata_contig5952:6208..6430Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5952 6209..6430 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930655.1019807-UTR-H-paniculata_contig5952:6430..68191622930655.1019807-UTR-H-paniculata_contig5952:6430..6819Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5952 6431..6819 -
1691481391.6798298-UTR-H-paniculata_contig5952:6430..68191691481391.6798298-UTR-H-paniculata_contig5952:6430..6819Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5952 6431..6819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5952.13594.1

>prot_H-paniculata_contig5952.13594.1 ID=prot_H-paniculata_contig5952.13594.1|Name=mRNA_H-paniculata_contig5952.13594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=622bp
MEPDLYRALRAKDLKRVRDCLGDWDNKNRWIWWSGTGRALSPLHVASKGS
SQDILAELLRHPQISCSINESTDKASVTPLHVAAGSSSPEVVRLLLDAGA
DISSPSGDRSTAFHIACSRGRIETCSELLRRGSLLEARDAEQRTPLMRAA
SSGRADVTKWLLAEGADPTAVDTHGNSALALSCRATNLDPAQALLDGGAD
VVSENAEGRTCAYLAAVSGRTELLEMMLDAMVRSGQRLRDGGGSILYDVV
ELGLVKVVQLLSSRRGQELGVNVSRQNPLKSGTTPLHAAVFRGQQGLVTE
LLSRGADPNLGNESGLGSLHFACATPDSQAVVRSLLKAKADANAKDTFDC
TPIYYAFVRGNDDLVHYLLARGASLFKMDYDQALRIACFYGLVQEVESLL
WMEADPNSVAANVRDRGLEFHLKVSPTIRDGVRELLADAVNDAQNADSVG
SGSTESLGNSGGGGRRQSRTVVAAKEAATAWGWACASPTGTVGQSEASSF
TSADTSTTTASRDVWCGGEGGSDSGEECTSSTATRRDDGTDTAEAAATSA
AAAPRRSGRSGSNSSSSSGKEEFDVEYDNGDFTLPVLSSLEDDLLRVGES
QQPYLSPNRASAALRRWGQLVR
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mRNA from alignment at H-paniculata_contig5952:2235..6819-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5952.13594.1 ID=mRNA_H-paniculata_contig5952.13594.1|Name=mRNA_H-paniculata_contig5952.13594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4585bp|location=Sequence derived from alignment at H-paniculata_contig5952:2235..6819- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACAGAAGGACCCCGACAGACAGGTCATAGCGAGACCCCAGATATCGTTG
GAATCATGTTTTGTAACGTTTGCAGCCAATATGACATCCACTCACAGCAC
TACCACTGTCTACCACACGCGCTGCCTCCCCTTACCTCCATCTTCCCCCC
TCTCTCCTCTCTTGCCTTGAAGACTAGCAGTTTGCAAAGCCAGGTGCTGC
TATCTTATCTTGAGAGATAGCGGGACAATCTTTGCTGACTGCACTGTCGG
CCTGTGGGTACTTGATACTACATCTACAAGAAGCTTTCGGCAGACAGTTA
AAACGTACTCCTTCGCAGGATCAATTCAGCGCTGGAACGGCGCTATCCAC
ACCGCAACCCTGTCGTGCACGGAAGACGCGTCCACGGCAATGGAGCCAGA
CCTTTACCGCGCCCTCCGGGCCAAGGACTTGAAGCGCGTGCGCGATTGCC
TTGGGGACTGGGACAACAAGAACCGCTGGATATGGTGGAGCGGGACCGGG
CGGGCACTTTCGCCGCTCCACGTCGCGAGCAAGGGATCGAGTCAAGACAT
CCTGGCGGAGCTCCTACGACACCCCCAGATATCCTGCAGCATCAATGAGA
GCACGGACAAGGTATGGAGGATGGGGGATTTCGTGAGAAGATACGAAGCG
TTCAAGGATTGAAATGATGGGTTGGTCAGCGGAGTCAATGCTCTTCTGTC
GAGGAGAGATATCGGCGTATCATGTATCACGGTCACATACTGGTTGTGCT
TTCTGCAGTCAACTAGTTATCATGTGATGATACTTGTTGTGTTATAGATA
TTACATTGAAGAATCGGCGAACAGGGTACTCCAAAGTCTATGCTTGCCCG
CCTGTGTGGGCATCTTGTGGATATCATCATAAATATAATTATATATGTAG
CGGAGTAGACTCTCAATTTTGCCATCTTATCTATCAAGGTCGAGGGCCAT
GCTCAACTAGCTGCCAGTTCGTAGTCCCATATTTTTAATTCCGTAAGACA
CAAGCATACAGACAGCGTGACACCTACCCACAGATTGGGTGACCCTTCAT
GATCGAGAAATTGTTGGCGCGGTGCTCTTATGGTGGCCACCAGGCAATCT
GCGACTGCTGCGTTGGTCTCGAAAGACAGTAAAATAATTTGCCACATGAA
ATGGGAGTAATTTTTTATTTTGAAATTTCGAGCTGAACCAATTATCATAT
CTTCAGACCTTTCGCTCGTCACCACCTGACAATGCTGATCAAGTCCGGTC
AGCTCGAGTTATAAGTTGATGTCTATCACTGTAGGAGTTCCTTTTCGACT
CGGGGGCTAAACACCTGATGTCCGGGGGGGGGGGGATGGCAAATTGCTCA
TTCCTTACGTGGCCATGAAAACCTATTCCTCCTGCTTCCCACCAACCCCT
CCCCTTTCCTGTTACAGGCGAGCGTCACACCTCTTCACGTCGCCGCGGGC
AGCAGCTCCCCCGAAGTCGTCCGTCTCCTGCTGGACGCCGGAGCTGACAT
CTCCTCCCCTTCGGGCGACCGATCGACCGCATTCCACATTGCCTGCAGCC
GCGGTCGAATCGAAACCTGCTCCGAACTTCTGCGGCGAGGATCACTACTT
GAAGCTCGGGACGCTGAACAGCGGACCCCGCTCATGCGTGCGGCATCTAG
CGGCCGGGCAGATGTCACCAAGTGGCTGCTCGCAGAAGGCGCCGACCCCA
CGGCTGTGGACACCCACGGCAACAGCGCACTCGCGCTAAGCTGCCGCGCG
ACCAATTTAGATCCTGCCCAAGCGTTACTTGATGGAGGCGCCGACGTCGT
ATCGGAAAACGCGGAGGGGCGGACGTGCGCGTATCTCGCCGCGGTGTCCG
GGCGGACCGAGCTGTTGGAGATGATGCTTGATGCCATGGTGCGGTCCGGT
CAACGGCTGAGGGACGGCGGCGGTTCGATTCTCTACGATGTCGTCGAGCT
CGGTCTGGTGAAGGTGGTACAGCTTCTGTCTAGCCGGCGGGGGCAGGAGT
TGGGAGTGAACGTGAGTCGGCAAAACCCGCTCAAGTCAGGCACCACGCCG
TTGCATGCGGCCGTGTTCCGTGGACAACAAGGGCTTGTGACTGAGCTGCT
CTCGCGCGGCGCCGACCCCAATCTGGGGAACGAGAGCGGACTTGGTTCGC
TGCACTTCGCGTGCGCTACCCCCGACAGCCAGGCAGTCGTGCGGTCTTTG
TTGAAGGCCAAGGCGGATGCGAATGCTAAAGACACCTTCGATTGTACACC
GATTTACTGTGAGTTTTGTTCACTTCTATTGCGTGGCTATCATAATTAAT
ATTAGGGTTCTACACGTAACGCCTGCAAAACCGTACGAATTATGAACAAA
AATATTTGATGGAATAAACCGAAAAAAGTCACAAAAAATCGGGCCGAGGA
GGCGTTGGTATCTTCCAGGTCAGCTTCATGTTCCCGAAAGAAAACTGCTG
TTTAATTTTTGGTACGGTGTGTGCTTTTAGAAATACGACTGTTGTCTTTT
CTCTTTTCCAGCGAACTTGCAAGATTTGAGTCAAATGATATCCAAGCTTG
TACTTGCATAATGTACTTCTGTAATGAAAAATATTATGTGCCGTAGGCGA
CGTTTATTATCACGGCGTGAGCCCTGCACAAACACCACTATTTTATATTT
TGTCCCATCGCAATTCTTCCTTGTGCTCTACGCTTTCGAAAGTGTCGTGC
ACCCCTACGAAATACACGGCACGCCACTTTTGAATATATCAGATCTCGAC
CGTTGTGTACAAGTGGCAGTGCTGAGCGATTTCACCATCCCTGAGGCATC
CTCTTTTTCACCATTCCGTGGCCCTCCACTGCCCCTTTTTTTTCCTGTAT
CGGCGGTATTGCAATTTTTTTTTTTTTCACATCTCAGATGCCTTTGTACG
CGGCAATGATGACCTCGTGCATTACCTGCTGGCTCGAGGTGAGACAAATA
TATGACGAGTGCGTACAGTACCTCCTTCCTGTTCTGTTTTTTCTTTTTTC
GTGTCCTTGCTCGGTTGGTGCCGGTCGCTAAGGGCGAGCTGGTCTCGGTG
GGGTACCGTAATTTTGCAGCCCTCCGCGGCCGCCCAGGTTTAGCCCCTTC
AACGCCGTGTGAAATAAGAGGCGGTTTGATTTTAGTGCAAACGGTCGCAA
TTTTGAGAGTATCTGATGTCCTGACTGAAACTTAAGCTTAATTGTTCCCT
ATTGCCCATTTTTCATCGACGGGAGGGTGAAAGAATACCATGGAGTTTTG
ATGGAGCGAAATACGAGTTGAACATACCATAAGATCCAATACATTATAAT
ATAATATGTACTGTAGAAACCCCCAAGGTATGCTTGATCGACTATCTAAC
AAACTGAGGCGGGCGGGCGGGCGGGGGGGGGATAGCTAAGCGCAAGCTGG
CAACACCCATCCTCGCTTTCTGTGATCTGCACGTTGTTTTTTTTTTTCAC
GCTCGAGAGAAACACGAATCAGGCAGGCAACCCGTCCCGTGGCCGTGGAG
AAGGAACAGGATATTGTCAGATGAGCTATTTAACTTTCCTGTGGCCTTGA
TATATGCTTATTTTCTGGCAAATATTCGCTGCACGTACGGGATGATACTT
CCTCGATACAGAAGAACGAAGCATGAAGCTAGCCCGAAACACAATTCACG
TGCATACCACCAATGTACTACGTGTTGATATCCGGGCACCGTTGTATCTT
TCCTGCGTATAGATACCCGTATCTTCTCCATATCCCCCCGACCACAAGAG
CTTACTCCACCCGCCCGGATCCGCCCCACCCCGGGTACAAAAACACTCAA
CAAAACACCACGAAAATCAACCCGTGAACACAGGGGCTAGCCTGTTCAAA
ATGGACTACGACCAAGCTCTTCGCATCGCATGCTTCTACGGCTTAGTGCA
AGAGGTCGAGTCTCTGCTCTGGATGGAAGCTGACCCGAACAGTGTGGCCG
CCAACGTCCGCGACCGAGGGTTGGAGTTTCACCTCAAAGTCTCTCCAACC
ATCCGCGACGGTGTGAGGGAGCTTCTCGCCGACGCCGTCAATGACGCGCA
GAATGCGGACAGTGTCGGTAGTGGGAGTACCGAAAGCCTTGGGAATAGTG
GCGGCGGCGGCCGCCGACAGAGTAGAACTGTCGTGGCTGCGAAAGAAGCT
GCGACGGCGTGGGGGTGGGCATGTGCCTCTCCGACCGGAACGGTCGGCCA
ATCTGAAGCGAGCAGTTTCACGAGCGCCGATACTTCAACGACCACCGCCA
GTCGGGATGTTTGGTGTGGGGGTGAGGGAGGTTCCGACAGTGGGGAAGAG
TGCACGAGTAGCACAGCGACCCGCCGAGATGACGGGACTGACACTGCAGA
AGCTGCTGCTACTAGTGCGGCTGCTGCCCCTCGGAGGAGTGGTCGCTCTG
GCAGCAACAGTAGCAGCAGCAGCGGCAAGGAGGAGTTTGACGTGGAGTAT
GACAACGGTGATTTTACGCTACCTGTCTTGTCCTCCTTGGAGGATGATCT
TCTCCGAGTAGGCGAATCACAACAACCATACCTTTCGCCCAATCGTGCCT
CAGCCGCCTTGAGAAGGTGGGGTCAACTTGTACGC
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Coding sequence (CDS) from alignment at H-paniculata_contig5952:2235..6819-

>mRNA_H-paniculata_contig5952.13594.1 ID=mRNA_H-paniculata_contig5952.13594.1|Name=mRNA_H-paniculata_contig5952.13594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3732bp|location=Sequence derived from alignment at H-paniculata_contig5952:2235..6819- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGCCAGACCTTTACCGCGCCCTCCGGGCCAAGGACTTGAAGCGCGT
GCGCGATTGCCTTGGGGACTGGGACAACAAGAACCGCTGGATATGGTGGA
GCGGGACCGGGCGGGCACTTTCGCCGCTCCACGTCGCGAGCAAGGGATCG
AGTCAAGACATCCTGGCGGAGCTCCTACGACACCCCCAGATATCCTGCAG
CATCAATGAGAGCACGGACAAGATGGAGCCAGACCTTTACCGCGCCCTCC
GGGCCAAGGACTTGAAGCGCGTGCGCGATTGCCTTGGGGACTGGGACAAC
AAGAACCGCTGGATATGGTGGAGCGGGACCGGGCGGGCACTTTCGCCGCT
CCACGTCGCGAGCAAGGGATCGAGTCAAGACATCCTGGCGGAGCTCCTAC
GACACCCCCAGATATCCTGCAGCATCAATGAGAGCACGGACAAGGCGAGC
GTCACACCTCTTCACGTCGCCGCGGGCAGCAGCTCCCCCGAAGTCGTCCG
TCTCCTGCTGGACGCCGGAGCTGACATCTCCTCCCCTTCGGGCGACCGAT
CGACCGCATTCCACATTGCCTGCAGCCGCGGTCGAATCGAAACCTGCTCC
GAACTTCTGCGGCGAGGATCACTACTTGAAGCTCGGGACGCTGAACAGCG
GACCCCGCTCATGCGTGCGGCATCTAGCGGCCGGGCAGATGTCACCAAGT
GGCTGCTCGCAGAAGGCGCCGACCCCACGGCTGTGGACACCCACGGCAAC
AGCGCACTCGCGCTAAGCTGCCGCGCGACCAATTTAGATCCTGCCCAAGC
GTTACTTGATGGAGGCGCCGACGTCGTATCGGAAAACGCGGAGGGGCGGA
CGTGCGCGTATCTCGCCGCGGTGTCCGGGCGGACCGAGCTGTTGGAGATG
ATGCTTGATGCCATGGTGCGGTCCGGTCAACGGCTGAGGGACGGCGGCGG
TTCGATTCTCTACGATGTCGTCGAGCTCGGTCTGGTGAAGGTGGTACAGC
TTCTGTCTAGCCGGCGGGGGCAGGAGTTGGGAGTGAACGTGAGTCGGCAA
AACCCGCTCAAGTCAGGCACCACGCCGTTGCATGCGGCCGTGTTCCGTGG
ACAACAAGGGCTTGTGACTGAGCTGCTCTCGCGCGGCGCCGACCCCAATC
TGGGGAACGAGAGCGGACTTGGTTCGCTGCACTTCGCGTGCGCTACCCCC
GACAGCCAGGCAGTCGTGCGGTCTTTGTTGAAGGCCAAGGCGGATGCGAA
TGCTAAAGACACCTTCGATTGTACACCGATTTACTGCGAGCGTCACACCT
CTTCACGTCGCCGCGGGCAGCAGCTCCCCCGAAGTCGTCCGTCTCCTGCT
GGACGCCGGAGCTGACATCTCCTCCCCTTCGGGCGACCGATCGACCGCAT
TCCACATTGCCTGCAGCCGCGGTCGAATCGAAACCTGCTCCGAACTTCTG
CGGCGAGGATCACTACTTGAAGCTCGGGACGCTGAACAGCGGACCCCGCT
CATGCGTGCGGCATCTAGCGGCCGGGCAGATGTCACCAAGTGGCTGCTCG
CAGAAGGCGCCGACCCCACGGCTGTGGACACCCACGGCAACAGCGCACTC
GCGCTAAGCTGCCGCGCGACCAATTTAGATCCTGCCCAAGCGTTACTTGA
TGGAGGCGCCGACGTCGTATCGGAAAACGCGGAGGGGCGGACGTGCGCGT
ATCTCGCCGCGGTGTCCGGGCGGACCGAGCTGTTGGAGATGATGCTTGAT
GCCATGGTGCGGTCCGGTCAACGGCTGAGGGACGGCGGCGGTTCGATTCT
CTACGATGTCGTCGAGCTCGGTCTGGTGAAGGTGGTACAGCTTCTGTCTA
GCCGGCGGGGGCAGGAGTTGGGAGTGAACGTGAGTCGGCAAAACCCGCTC
AAGTCAGGCACCACGCCGTTGCATGCGGCCGTGTTCCGTGGACAACAAGG
GCTTGTGACTGAGCTGCTCTCGCGCGGCGCCGACCCCAATCTGGGGAACG
AGAGCGGACTTGGTTCGCTGCACTTCGCGTGCGCTACCCCCGACAGCCAG
GCAGTCGTGCGGTCTTTGTTGAAGGCCAAGGCGGATGCGAATGCTAAAGA
CACCTTCGATTGTACACCGATTTACTATGCCTTTGTACGCGGCAATGATG
ACCTCGTGCATTACCTGCTGGCTCGAGATGCCTTTGTACGCGGCAATGAT
GACCTCGTGCATTACCTGCTGGCTCGAGGGGCTAGCCTGTTCAAAATGGA
CTACGACCAAGCTCTTCGCATCGCATGCTTCTACGGCTTAGTGCAAGAGG
TCGAGTCTCTGCTCTGGATGGAAGCTGACCCGAACAGTGTGGCCGCCAAC
GTCCGCGACCGAGGGTTGGAGTTTCACCTCAAAGTCTCTCCAACCATCCG
CGACGGTGTGAGGGAGCTTCTCGCCGACGCCGTCAATGACGCGCAGAATG
CGGACAGTGTCGGTAGTGGGAGTACCGAAAGCCTTGGGAATAGTGGCGGC
GGCGGCCGCCGACAGAGTAGAACTGTCGTGGCTGCGAAAGAAGCTGCGAC
GGCGTGGGGGTGGGCATGTGCCTCTCCGACCGGAACGGTCGGCCAATCTG
AAGCGAGCAGTTTCACGAGCGCCGATACTTCAACGACCACCGCCAGTCGG
GATGTTTGGTGTGGGGGTGAGGGAGGTTCCGACAGTGGGGAAGAGTGCAC
GAGTAGCACAGCGACCCGCCGAGATGACGGGACTGACACTGCAGAAGCTG
CTGCTACTAGTGCGGCTGCTGCCCCTCGGAGGAGTGGTCGCTCTGGCAGC
AACAGTAGCAGCAGCAGCGGCAAGGAGGAGTTTGACGTGGAGTATGACAA
CGGTGATTTTACGCTACCTGTCTTGTCCTCCTTGGAGGATGATCTTCTCC
GAGTAGGCGAATCACAACAACCATACCTTTCGCCCAATCGTGCCTCAGCC
GCCTTGAGAAGGTGGGGTCAACTTGTACGCGGGCTAGCCTGTTCAAAATG
GACTACGACCAAGCTCTTCGCATCGCATGCTTCTACGGCTTAGTGCAAGA
GGTCGAGTCTCTGCTCTGGATGGAAGCTGACCCGAACAGTGTGGCCGCCA
ACGTCCGCGACCGAGGGTTGGAGTTTCACCTCAAAGTCTCTCCAACCATC
CGCGACGGTGTGAGGGAGCTTCTCGCCGACGCCGTCAATGACGCGCAGAA
TGCGGACAGTGTCGGTAGTGGGAGTACCGAAAGCCTTGGGAATAGTGGCG
GCGGCGGCCGCCGACAGAGTAGAACTGTCGTGGCTGCGAAAGAAGCTGCG
ACGGCGTGGGGGTGGGCATGTGCCTCTCCGACCGGAACGGTCGGCCAATC
TGAAGCGAGCAGTTTCACGAGCGCCGATACTTCAACGACCACCGCCAGTC
GGGATGTTTGGTGTGGGGGTGAGGGAGGTTCCGACAGTGGGGAAGAGTGC
ACGAGTAGCACAGCGACCCGCCGAGATGACGGGACTGACACTGCAGAAGC
TGCTGCTACTAGTGCGGCTGCTGCCCCTCGGAGGAGTGGTCGCTCTGGCA
GCAACAGTAGCAGCAGCAGCGGCAAGGAGGAGTTTGACGTGGAGTATGAC
AACGGTGATTTTACGCTACCTGTCTTGTCCTCCTTGGAGGATGATCTTCT
CCGAGTAGGCGAATCACAACAACCATACCTTTCGCCCAATCGTGCCTCAG
CCGCCTTGAGAAGGTGGGGTCAACTTGTACGC
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