mRNA_H-paniculata_contig5946.13582.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: D7G0R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R1_ECTSI) HSP 1 Score: 350 bits (898), Expect = 6.660e-111 Identity = 183/218 (83.94%), Postives = 192/218 (88.07%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHEDIE-------------QKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAY 615
EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLH GRG+ +D +D+ GGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTE LMERMSGGD RFMSIP EDIE QKRLTYDASIHLTNFDRLLGSW+LITVTANPDKVDEAIKACQDTLRDM+GPVPITADN+ESAKRVLINRH+G+LR NAY
Sbjct: 656 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLH--GRGMGDDGS---DDVEGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEMLMERMSGGDSRFMSIPQEDIEPITLKRLFSVVREQKRLTYDASIHLTNFDRLLGSWYLITVTANPDKVDEAIKACQDTLRDMSGPVPITADNIESAKRVLINRHEGDLRTNAY 868
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A6H5JCY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY0_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.060e-89 Identity = 189/383 (49.35%), Postives = 201/383 (52.48%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHEDIE-----------------------------------------------------------------------------------------------------------------------------------------------------QKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW*VIYPAMMVVIFHSTYTCEKG-GLSCTN 699
EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLH GRG+ +D +D+ GLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTE LMERMSGGD RFMSIP EDIE QKRLTYDASIHLTNFDRLLGSW+LITVTANPDKVDEAIKACQDTLRDM+GPVPITADN+ESAKRVLINRH+G+LR NAYW + + + C G LSC N
Sbjct: 909 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLH--GRGMGDDGS---DDVEEGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEMLMERMSGGDSRFMSIPQEDIEPITLEQASMAIEGHLATSHMEVSLVGDFDIAEAERMTLLYLGTIKPSEREAFLRPSVEAVPASDAAVTTPRHLDVHLPDSDDRAVGYVAGSAPNRWGMMRDGSSILDLFPKPQGGDKKKDHRAHTLFAPVVLLMLKEALNRRLFSVVREQKRLTYDASIHLTNFDRLLGSWYLITVTANPDKVDEAIKACQDTLRDMSGPVPITADNIESAKRVLINRHEGDLRTNAYWCDLLSGLQL-------DCLPGKDLSCVN 1279
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A836C760_9STRA (Stromal processing peptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C760_9STRA) HSP 1 Score: 197 bits (501), Expect = 8.890e-54 Identity = 130/356 (36.52%), Postives = 161/356 (45.22%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHEDI------------------------------------------------------------------------------------------------------------------------------------------------------EQKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW 618
EQVELFCIDHLVMVTV+A++EFL LD +FPTTKLH GV A G++ L+G EAA QV++QIL+G+VWEE+AL RAKQ+F Q HE +KSLEG STE LM +MS GD RF+S+PHE + EQ RLTYDA+ HLT+++RL GSW+L+TVTANP K A++AC+DTL D+ PIT DNVESAKRVLINRH+ ++R N YW
Sbjct: 635 EQVELFCIDHLVMVTVDASEEFLTLDFSFPTTKLHAR-EGV-----AEGDE----LSGFEAALQVVNQILTGYVWEEDALNRAKQAFYQLHEASIKSLEGSSTEQLMAQMSSGDSRFLSVPHEAVRALTLEQVREAVMSQLTTDAMEVSLAGDFELAEGERLMLQYLGTVPAGRRTAETRAQAEDIPAAEAADASRHIDVHLQDSDDRAVAYVSGLCPNKWGVMRGGKTLLNVYQELEPSPSKDAAQRREHPLFPSVALALLKEVINRRLFSTVREQMRLTYDANFHLTSYERLQGSWYLVTVTANPSKARAALEACKDTLCDLTTSAPITYDNVESAKRVLINRHEADMRTNQYW 980
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A6U0SKE1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0SKE1_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.390e-41 Identity = 108/365 (29.59%), Postives = 151/365 (41.37%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHEDI--------------------------------------------------------------------------------------------------------------------------------------------------------EQKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW*VIYPAM 639
EQVELFC+DHL+MV + N+E L +D FPTT + N GEDM G+ G EA Q++ +IL GF WEE+AL R KQS+ +HE++ KSLEG+STE +ME M+ D RF+SI + + E+K+LTYDA+ LT F+RL+G WFL+TVTA+ +K +A++AC++TL + G PI+ DN+ESAKRV++NRH+GELR ++YW I +
Sbjct: 510 EQVELFCVDHLLMVEINCNEEALVIDFTFPTTNVG---------NIGFGEDMKLGITGTEAVMQIVREILIGFHWEEDALGRGKQSYRTAHESMQKSLEGKSTEKIMESMTSQDDRFLSIDVDTVNAVTLEDAKNAVMSQLQPSDLEISVAGDFDQQEVLDMILEYLGTIPSDANAEYLVEGKDMKFGSVPSLSLPGKHLELELTDSDPRAVSYVAGAAPNMWGYLADGTTVAQRVQEADKRASEYDKQRRAHPLFANVALSLLSEIANRRLFSTVRERKQLTYDANFSLTGFERLMGGWFLVTVTASKEKAQKALEACKETLDALRGSSPISPDNLESAKRVVMNRHEGELRTSSYWATIMSGL 865
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A7S4HUK7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HUK7_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.410e-40 Identity = 115/389 (29.56%), Postives = 155/389 (39.85%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHEDI----------------------------------------------------------------------------------------------------------------------------------------------------------EQKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW*VIYPAMMVVIFHSTYTCEKGGLSCTNTN 705
EQVELFC+DHL+MV + N+E L LD FPTT + N GE+M G+ G EA Q+L +IL F WEE+AL R+KQSF +HE+L K+LEG++TE +ME M+G D RF+SI + + E+K+LTYDA+ T F+RL G WFL+TVTA+ + +A+ AC++TL + PIT DN+ESAKRV++NRH+GELR + YW AMM+ KG LS T+ N
Sbjct: 769 EQVELFCVDHLIMVEINCNEESLVLDFVFPTTNVG---------NTGFGENMQLGITGTEAVMQILREILVDFHWEEDALGRSKQSFRSAHESLQKNLEGKTTEVIMEGMTGNDKRFLSIDVDTVNAVTLDEAKSAVMSQLLPPELEMSVAGDFDVSEVLDLLYKYIGTIPSQSNSEYKRDGQDAPAAFGSVPALALPGKHLELELSDSDPRAVSYVAGAAPNLWGYLADGSSVVDNIMEADKRSSNYDKQRRAHPLFANVALALVAEIANRRLFSTVRERKQLTYDANFSFTGFERLKGGWFLVTVTASKENAQKALDACKETLEALRKSSPITPDNLESAKRVVLNRHEGELRTSGYW-----AMMMSGLQQESIPLKGPLSVTDFN 1143
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A7S2EV96_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EV96_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.670e-36 Identity = 103/359 (28.69%), Postives = 148/359 (41.23%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIP------------------------------------------------------------------------------HEDIE---------------------------------------------------------------------------QKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW 618
EQVELFC+DHL+MV + N+E L +D FPTT + N G+++ G+ G EA QV+ ++++GF WEE+AL R+KQS+ +HE+L KSLEG+STE +M M+ D R++SI H D+E +K+LTYDA+ LT F+RL+G +FL+TVTA+ +K +A+ AC++TL + PIT DN+ESAKRV++NRH+GELR + YW
Sbjct: 522 EQVELFCVDHLLMVEINCNEESLTIDFVFPTTNVG---------NVGFGDNVELGITGTEAVLQVVREVIAGFHWEEDALGRSKQSYRSAHESLNKSLEGKSTEMIMAAMTDNDDRYLSIDVDTVNAVTLEDAKNAVMSQLHPSNLEISVAGDFQVNETLEMILKYIGTIPADANSEYTVDEQSGPLIGAVPALPQPGRHLDLELEDSDPRAVAYVSGAAPNLWGYLADGTTVKDRVLAADKKASDYDKQRRNHPLFANAALALVSEIANRRLFSTVRERKQLTYDANFSLTGFERLMGGYFLVTVTASKEKAQQALDACKETLDALRKSNPITPDNLESAKRVVLNRHEGELRTSGYW 871
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: B8CCG1_THAPS (Stromal processing peptidase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCG1_THAPS) HSP 1 Score: 146 bits (369), Expect = 4.290e-36 Identity = 109/387 (28.17%), Postives = 154/387 (39.79%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIP-----------------------------------------------------------------------------HEDIE---------------------------------------------------------------------------QKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW*VIYPAMMVVIFHSTYTCEKGGLSCTNTN 705
EQVELF +DHL+MV + N+E L +D FPTT + N G+ G+ G E+ Q++ +IL F WEE+AL R+K S+ +HE+L KSLEG+STE +M+ ++GGD RF+SI H D+E +K+LTYDA+ LT F+R+ G WFL+TVTA+ +K A++AC++TL + PI+ DN+ESAKRV++NRH+GELR + YW A M+ KG LS T+ N
Sbjct: 619 EQVELFAVDHLIMVEINCNEEALVMDFVFPTTNVG---------NTGYGDTKQMGITGTESVLQIVREILIDFNWEEDALGRSKTSYRSAHESLGKSLEGKSTEMIMDNLAGGDKRFLSIDSRTVSEVTLEDAKNAVMSQLIPSELEISVAGDFVVNEVLEMILKYIGTVPANANEEYRVKDAPEKFNNVPALQLPGRHLDLELEDSDPRAVAYVAGAAPNLWGFLADGSTVAKKVSDADKRASDYDKQRRAHPLFGNAALALISEIANRRLFSTVRERKQLTYDANFSLTGFERMKGGWFLVTVTASKEKAQAALEACKETLEALRTSNPISPDNLESAKRVVLNRHEGELRTSQYW-----ATMMSGIQEESIPLKGPLSVTDFN 991
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: K0TGU5_THAOC (Peptidase_M16_C domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGU5_THAOC) HSP 1 Score: 142 bits (358), Expect = 1.820e-35 Identity = 103/363 (28.37%), Postives = 143/363 (39.39%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIP----------------------------------------------------------------------------------HEDIE---------------------------------------------------------------------------QKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW 618
EQVELF +DHL+MV + N+E L +D FPTT + N G+D G+ G E+ Q++ +IL F WEE+AL R+KQS+ +HE+L KSLEG STE +M+ ++ GD RF+SI H DIE +K+LTYDA+ LT F+R+ G WFL+TVTA+ +K A+ AC++TL + PI+ DN+ESAKRV++NRH+GELR + YW
Sbjct: 74 EQVELFAVDHLIMVEINCNEEALTMDFVFPTTNVG---------NTGYGDDKRLGITGTESVLQIVREILVEFNWEEDALGRSKQSYRTAHESLGKSLEGYSTEMIMDAVASGDSRFLSIDVDTVNAVTLEDAKNAVMSQLMPKDIEISVSGDFVVNDVMDMILKYLGTVPADANSEYQVKDKDGDVKPTEFNAVPALGLPGKHLDIELEDSDPRAVAYVAGASPNAWGFLSDGTTVAERVSAADKRASDYDKQRRAHPLFANAALSLVSEIANRRLFSTVRERKQLTYDANFSLTGFERMKGGWFLVTVTASKEKAQAALDACKETLEALRTTNPISPDNLESAKRVVLNRHEGELRTSQYW 427
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A7S3XQN3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN3_HETAK) HSP 1 Score: 135 bits (339), Expect = 1.090e-33 Identity = 94/290 (32.41%), Postives = 115/290 (39.66%), Query Frame = 1
Query: 193 VLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHE---------------------------------------------------------------------------DI-------------------------------------------------------------------------EQKRLTYDASIHLTNFDRLLGSWFLITVTANPDKVDEAIKACQDTLRDMNGPVPITADNVESAKRVLINRHDGELRMNAYW 618
V+HQIL+GFVWEE+AL RAK F Q+H+TL KSLEG +TEALM R++GGD F+S+ H D+ EQKRLTYDA+ HLT F+ L GSW+L+TVTANP A++AC+DTL D+ G PIT DNVESAKRVLINRHDG++R N YW
Sbjct: 1 VVHQILTGFVWEEDALGRAKAGFQQTHDTLTKSLEGATTEALMARVAGGDPAFLSVGHATTRGLTLDQVREAVTAQLTTDALDVSICGDVDLAELEGLVLKYLGTVPRSQRQVEAPTRAVPAPAAAAAAESRHLDVFLPDSDERAVAYVAGTAPNRWGYLQDGTHLLDLFRATGPPPEALARWDHPLFANVALGLLREVVNRRLFSNVREQKRLTYDANFHLTAFENLAGSWYLVTVTANPVNAQRALQACKDTLFDLAGASPITPDNVESAKRVLINRHDGDVRSNQYW 290
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Match: A0A7S1HIP4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HIP4_HEMAN) HSP 1 Score: 121 bits (303), Expect = 6.940e-28 Identity = 61/126 (48.41%), Postives = 85/126 (67.46%), Query Frame = 1
Query: 1 EQVELFCIDHLVMVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAFQVLHQILSGFVWEEEALKRAKQSFLQSHETLVKSLEGRSTEALMERMSGGDGRFMSIPHEDIE 378
EQVELFC+DHLV+ + N+EFL+L+ FPT K V N+ D V +GME FQV+H +++ F WEE+AL+RAKQ+F+Q+HE + KSLE + E L++ M GGD R++SIP E +E
Sbjct: 233 EQVELFCVDHLVVAEIACNEEFLFLEFVFPTNK-------VSNEPDDV--------SGMEGVFQVVHGLIADFKWEEDALERAKQAFVQTHEQVSKSLEAAAAEHLLDGMCGGDARYLSIPGEKVE 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5946.13582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5946.13582.1 >prot_H-paniculata_contig5946.13582.1 ID=prot_H-paniculata_contig5946.13582.1|Name=mRNA_H-paniculata_contig5946.13582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MVTVEANDEFLYLDLAFPTTKLHMHGRGVDNDNDAVGEDMNGGLNGMEAAback to top mRNA from alignment at H-paniculata_contig5946:474..8278+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5946.13582.1 ID=mRNA_H-paniculata_contig5946.13582.1|Name=mRNA_H-paniculata_contig5946.13582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7805bp|location=Sequence derived from alignment at H-paniculata_contig5946:474..8278+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5946:474..8278+ >mRNA_H-paniculata_contig5946.13582.1 ID=mRNA_H-paniculata_contig5946.13582.1|Name=mRNA_H-paniculata_contig5946.13582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig5946:474..8278+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |