prot_H-paniculata_contig5944.13579.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5944.13579.1
Unique Nameprot_H-paniculata_contig5944.13579.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length537
Homology
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: D8LNZ1_ECTSI (PDCD2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ1_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 9.530e-106
Identity = 230/546 (42.12%), Postives = 288/546 (52.75%), Query Frame = 0
Query:   36 AWFGQAPVSTGDLVCRLCGRRLFLIAQVFAPTHVPRTLCVFGCNHAACSTSPEGWRVIRSQQQDHERLPENPTAKKPSESPVELPLSAPSNHAAAANSVIAPTVLDKPVDSAAGAWGADETSWDDGCA-GDNWGATSGDGDWGVGAPGEWNSDGGVLGGIGDGDAATAAIDALLTEQEARSRQHAVGNRR------------------LPDSGLEEGKSGACGGESAXXXXXXXXXXXXXXXXXXXXXXXXXXYFPPKALNFSPEPWGLEASSSADRGMEKRIQQYREQEEDRALVAALDEALGS------SSGPGSKSGAPSASSTIGEKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEMQLMPALLLGLRVNDFAEARQNNRGNGRDTVVRADRAMVESNRVS-----------NNSNKS----AEHVGPHGREGNTLEKQQERLKPGSRDLVDGGGGSGDE-EG----VPPSPSAEERRKLETWGMDWGVVTVWSCPSSCDLSCEEAVVVQPPV 536
            AWFG+APV  GDLVC LCGR L+L+ Q++APTHV R+LC+FGCN AACS  PEGWRV+R+Q          P   +P++   +                  PT    P   A   WGA + SWD   + G+ WG        GV   G        +GGI     ATA IDALL +QE +      G+R                   L + G     SG     S                            FP K ++F PEPWG E+S + D+ ME R+++YREQEEDR LVAALD ALG       SS  G K G   A +++GEKYERTPARAKAV++FA+RVAR+P Q+VRYAYGG PLWSAS+PP+ ++P C CGA RVFEMQLMPALLL L+VND AE    +   G         + +ES ++S           NN+ KS    A  V P G        +    +     ++ G G SG+E EG    + P+PS EER +L T GMDWGVV +WSCP SC +SCEE VVVQ PV
Sbjct:   38 AWFGEAPVKVGDLVCGLCGRWLYLVTQIYAPTHVERSLCLFGCNRAACSLRPEGWRVVRTQA---------PQPVEPAQDDSD------------------PTAASAPAAHATDPWGASDVSWDAPASDGEGWGXXXXXXXXGVDTEG--------VGGI-----ATADIDALLDKQEKKQSSTCQGDRASAAAXXXXXSTGGDTCSSLAELGPNHSSSG-----SGSQKKSAAESSKSDTVAAEGGDWGGRPCFPAKTVSFVPEPWGAESSRTDDKDMENRLRRYREQEEDRGLVAALDHALGLKDAGGLSSEHGGKEG--KAVASVGEKYERTPARAKAVMRFADRVARSPQQVVRYAYGGEPLWSASDPPREEIPPCACGATRVFEMQLMPALLLQLQVNDLAERETGSLEGGSPATF----SGLESKKISTLSQVADGHDNNNTLKSITPSAVAVQPKGAASTRSTDEHGVAQGDGSGVLAGIGVSGEEDEGNETTMMPTPSVEERERLRTLGMDWGVVAIWSCPRSCSISCEECVVVQLPV 532          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A8K1CFZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFZ9_PYTOL)

HSP 1 Score: 93.6 bits (231), Expect = 9.960e-17
Identity = 64/196 (32.65%), Postives = 79/196 (40.31%), Query Frame = 0
Query:  339 GEKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEMQLMPALLLGLRVNDFAEARQNNRGNGRDTVVRADRAMVESNRVSNNSNKSAEHVGPHGREGNTLEKQQERLKPGSRDLVDGGGGSGDEEGVPPSPSAEERRKLETWGMDWGVVTVWSCPSSCDLSCEEAVVVQP 534
            GE YERTPA+ K  ++F +R++R P Q++RY YGG PLW A       VPRC CG  R FE QL P +   L+V++FA                              + K   H  P        +K      P S     GG                        GMDW  V V+SCP SC  S EE   VQP
Sbjct:  311 GESYERTPAQQKHFMRFQKRISRCPLQVLRYDYGGEPLWPAPPARNLKVPRCPCGEERAFEFQLTPTINYFLKVDEFA------------------------------AKKLEAHAVP--------KKSDSDAPPASAPTQSGG------------------------GMDWASVVVYSCPKSCQQSREEFAYVQP 444          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A2D4BDN7_PYTIN (PDCD2_C domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDN7_PYTIN)

HSP 1 Score: 89.7 bits (221), Expect = 3.820e-16
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 0
Query:  299 IQQYREQEED---------RALVAALDEALGSSSGPGSKSGAPSASSTIGEKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEMQLMPALLLGLRVNDFA 416
            +QQY  QEE+         R ++A   ++ GS SG        SA+++ GE YERTPA+ K  ++F +R+ R P Q++RY YGG PLW    P    +PRC CG  R FE+QL P +   L+V++FA
Sbjct:  126 LQQYMRQEEEDKSTDVNDLRRIIANAKKSDGSVSG--------SAAASSGESYERTPAQQKHFMRFQKRINRCPLQVLRYDYGGEPLWPTPMPRGLKIPRCACGEERAFELQLTPTINYFLKVDEFA 244          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A1V9ZKR8_9STRA (PDCD2_C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKR8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.200e-16
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 0
Query:  339 GEKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEMQLMPALLLGLRVNDFA 416
            GE YERTP R K +L+F +R+ RAPTQ +RY YGG PLW  S PPK DVP C CG ARVFE+QL+P     L+V  +A
Sbjct:  249 GESYERTPLREKLLLRFQKRMKRAPTQCLRYHYGGDPLWP-SPPPKIDVPPCVCGQARVFELQLVPTTNYFLKVEKYA 325          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A067CN94_SAPPC (PDCD2_C domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CN94_SAPPC)

HSP 1 Score: 90.5 bits (223), Expect = 4.870e-16
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  340 EKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEMQLMPALLLGLRVNDFA 416
            E YERTP R K  L+F +R+ RAPTQ +RY YGG PLWS S PPK DVP C CGA+RVFE+QL+P     L V  +A
Sbjct:  234 EAYERTPLREKLFLRFQKRMKRAPTQCLRYHYGGNPLWS-SPPPKIDVPPCPCGASRVFELQLVPTTNYFLNVEKYA 309          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A1W0A1M6_9STRA (PDCD2_C domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1M6_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.890e-15
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 0
Query:  340 EKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEMQLMPALLLGLRVNDFA 416
            E YERTP R K  L+F +R+ RAPTQ +RY YGG PLW    PPK ++P+CKCG  RVFE+QL+P     L+V  +A
Sbjct:  243 ESYERTPLREKLFLKFKKRIKRAPTQCLRYNYGGEPLWPYP-PPKLEIPKCKCGQERVFELQLVPTTNYFLQVEKYA 318          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A7S4IB63_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IB63_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.540e-14
Identity = 78/214 (36.45%), Postives = 93/214 (43.46%), Query Frame = 0
Query:  340 EKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSA---SEPPKSD----------------VPRCK-CGAARVFEMQLMPALLLGLRVNDFAEARQNNRGNGRDTVVRADRAMVESNRVSNNSNKSAEHVGPHGREGNTLEKQQERLKPGSRDLVDGGGGSGDEEGVPPSPSAEERRKLETWGMDWGVVTVWSCPSSCDLSCEEAVVVQ 533
            EKYER P   +A L F ER+ RAP Q+VRYAYGG+PLWS    S P K +                VP C  CG+ R FEMQL PALLL L V+  A            T+  +         VS    +  E  G                  GSR  VDGGG     EG                GM+WG + V+ CP SCD S  EA+V+Q
Sbjct:  160 EKYERLPPDQRAFLTFTERMRRAPRQVVRYAYGGVPLWSVPTPSPPSKKEKRNRGRKSARRTQFPSVPPCTGCGSERTFEMQLAPALLLALDVDGHALL---------PTLASS---------VSAGEGEGREEEG------------------GSRG-VDGGG-----EG----------------GMNWGSIAVYCCPLSCDGSRGEALVMQ 315          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: B8C467_THAPS (PDCD2_C domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C467_THAPS)

HSP 1 Score: 84.3 bits (207), Expect = 1.310e-13
Identity = 75/278 (26.98%), Postives = 109/278 (39.21%), Query Frame = 0
Query:  286 EASSSADRGMEKRIQQYREQEEDRALVAALDEA-LGSSSGPGSKSGAPSASSTIGEKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKS-----------------------------DVPRCKCGAARVFEMQLMPALLLGLRVNDFAEARQNNRGNGRDTVVRADRAMVESNRVSNNSNKSAEHVGPHGREGNTLEKQQERLKPGSRDLVDGGGGSGDEEGVPPSPSAEERRKLETWGMDWGVVTVWSCPSSCDLSCEEAVVVQ 533
            E +++ +  + + + +Y   E+D  +++AL    +  S G G   G        GE+YER P   +A + F++R+ RAP Q+ RYAYGG+PLWS   P K                               VP C CGA R+FE QL+P++L  L V D A A   N+GN  D V+                                                                       ++T GM+WG + V+SCP SCD S EE ++VQ
Sbjct:  281 EGANNTESKVNQLLSRYLSTEDDEEILSALKGGDISYSGGGGGDKG--------GERYERLPPEERAFVSFSKRLKRAPEQVARYAYGGVPLWSIPLPNKQRHQQQSKQQSKKNPNNKTHKQAVDFYPFPTVPDCVCGAKRMFEFQLLPSMLHVLDV-DSANA---NKGNDNDDVMYL---------------------------------------------------------------------IKTGGMNWGSIAVYSCPESCDDSREEFLIVQ 477          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A2P4YBS7_9STRA (PDCD2_C domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBS7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.660e-12
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   34 TVAWFGQAPVSTGDLVCRLCGRRLFLIAQVFAPTHVPRTLCVFGCNHAACSTSPEGWRVIRSQ----QQDHERL 103
            T AW+   P    DL+C  C + LFL+AQV+AP  + RTL VFGCN  AC+ +P  WRV+R Q    ++DH+ +
Sbjct:   31 TPAWYSSPPSVANDLICTKCSKGLFLVAQVYAPVEMDRTLYVFGCNSVACTENPGSWRVLRDQVEPVKEDHKSV 104          
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Match: A0A1Z5J7D1_FISSO (Pre-rRNA-processing protein TSR4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7D1_FISSO)

HSP 1 Score: 77.4 bits (189), Expect = 6.140e-12
Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 0
Query:  289 SSADRGMEKRIQQYREQEEDRALVAALDEALGSSSGPGSKSGAPSASSTIGEKYERTPARAKAVLQFAERVARAPTQIVRYAYGGMPLWSAS-EPPKSD-----------------------VPRCKCGAARVFEMQLMPALLLGLRVN 413
            + +D  ++K +++Y  +EED  ++ AL  ++G SSG G +           EK ER  A  +A+L F++R+ R P Q++RYAY G+PLWS   E P  +                       +P C+CGA RVFE+Q++P+LL  L V+
Sbjct:   83 TGSDDKIQKMLERYMMEEEDEEILTALRGSVGPSSGGGGR-----------EKDERLSAADRALLTFSDRLKRWPRQVLRYAYNGVPLWSIPIESPIEETKHIPQRARAKKQAAAARNWEPVIPACRCGAPRVFELQILPSLLHVLEVD 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5944.13579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ1_ECTSI9.530e-10642.12PDCD2_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A8K1CFZ9_PYTOL9.960e-1732.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BDN7_PYTIN3.820e-1640.94PDCD2_C domain-containing protein n=1 Tax=Pythium ... [more]
A0A1V9ZKR8_9STRA4.200e-1658.97PDCD2_C domain-containing protein n=1 Tax=Achlya h... [more]
A0A067CN94_SAPPC4.870e-1659.74PDCD2_C domain-containing protein n=2 Tax=Saproleg... [more]
A0A1W0A1M6_9STRA6.890e-1554.55PDCD2_C domain-containing protein n=1 Tax=Thrausto... [more]
A0A7S4IB63_9STRA1.540e-1436.45Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8C467_THAPS1.310e-1326.98PDCD2_C domain-containing protein n=1 Tax=Thalassi... [more]
A0A2P4YBS7_9STRA5.660e-1245.95PDCD2_C domain-containing protein n=1 Tax=Phytopht... [more]
A0A1Z5J7D1_FISSO6.140e-1234.23Pre-rRNA-processing protein TSR4 n=1 Tax=Fistulife... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007320Programmed cell death protein 2, C-terminalPFAMPF04194PDCD2_Ccoord: 304..533
e-value: 2.5E-28
score: 99.3
NoneNo IPR availablePANTHERPTHR46421FAMILY NOT NAMEDcoord: 23..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5944contigH-paniculata_contig5944:1323..7767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5944.13579.1mRNA_H-paniculata_contig5944.13579.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5944 156..9136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5944.13579.1 ID=prot_H-paniculata_contig5944.13579.1|Name=mRNA_H-paniculata_contig5944.13579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=537bp
MPSCAALCGTNTTAQSVTQHVVCDLPSYRELQSTVAWFGQAPVSTGDLVC
RLCGRRLFLIAQVFAPTHVPRTLCVFGCNHAACSTSPEGWRVIRSQQQDH
ERLPENPTAKKPSESPVELPLSAPSNHAAAANSVIAPTVLDKPVDSAAGA
WGADETSWDDGCAGDNWGATSGDGDWGVGAPGEWNSDGGVLGGIGDGDAA
TAAIDALLTEQEARSRQHAVGNRRLPDSGLEEGKSGACGGESAAAQKRAD
NDPIIVPGGGEEDGEEACCYFPPKALNFSPEPWGLEASSSADRGMEKRIQ
QYREQEEDRALVAALDEALGSSSGPGSKSGAPSASSTIGEKYERTPARAK
AVLQFAERVARAPTQIVRYAYGGMPLWSASEPPKSDVPRCKCGAARVFEM
QLMPALLLGLRVNDFAEARQNNRGNGRDTVVRADRAMVESNRVSNNSNKS
AEHVGPHGREGNTLEKQQERLKPGSRDLVDGGGGSGDEEGVPPSPSAEER
RKLETWGMDWGVVTVWSCPSSCDLSCEEAVVVQPPV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007320PDCD2_C