prot_H-paniculata_contig5942.13576.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5942.13576.1
Unique Nameprot_H-paniculata_contig5942.13576.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.570e-31
Identity = 80/211 (37.91%), Postives = 122/211 (57.82%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF  ++LGE +++ G  + R+ +A  L++ Q  Y+ S+ E F V+ TSRIPA  GA    K        ++EE  ++  REA+G+ MW +T +RP ++ AVRA AR
Sbjct:  852 QAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1054          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.660e-31
Identity = 80/211 (37.91%), Postives = 122/211 (57.82%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF  ++LGE +++ G  + R+ +A  L++ Q  Y+ S+ E F V+ TSRIPA  GA    K        ++EE  ++  REA+G+ MW +T +RP ++ AVRA AR
Sbjct: 1231 QAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1433          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.680e-31
Identity = 80/211 (37.91%), Postives = 122/211 (57.82%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF  ++LGE +++ G  + R+ +A  L++ Q  Y+ S+ E F V+ TSRIPA  GA    K        ++EE  ++  REA+G+ MW +T +RP ++ AVRA AR
Sbjct: 1251 QAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1453          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.690e-31
Identity = 80/211 (37.91%), Postives = 122/211 (57.82%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF  ++LGE +++ G  + R+ +A  L++ Q  Y+ S+ E F V+ TSRIPA  GA    K        ++EE  ++  REA+G+ MW +T +RP ++ AVRA AR
Sbjct: 1394 QAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPK-------REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1596          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 8.100e-31
Identity = 80/211 (37.91%), Postives = 120/211 (56.87%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF  ++LGE +++ G  + R+  A  L++ Q  Y+ S+ E F V+ TSRIPA  GA    K ++ K  E       +  REA+G+ MW +T +RP ++ AVRA AR
Sbjct:  443 QAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE-------WPVREAVGSMMWVSTFSRPDVSFAVRAVAR 645          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5JJ03_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ03_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.520e-30
Identity = 79/211 (37.44%), Postives = 116/211 (54.98%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++ +P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M+ V+ +DD L         E+ A  L  KF   +LGE E++ GY + R+ +A   ++ Q  Y+ S+ + F V+ TSRIPA  G     K D+ K  E       +  REA+G+ MW +T +RP ++ AVRA AR
Sbjct:  461 QAYTHATLDEEVFLRLPAGCGDKSHKIVKTERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMITVIYVDDNLVAGSDEGCEEFLAC-LNKKFPTTNLGECEWFDGYAIERDVEAGTYRISQTAYIDSMVKCFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVAR 663          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.540e-30
Identity = 80/211 (37.91%), Postives = 118/211 (55.92%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV+++ P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF   ++GE E++ G  + R+ +A  LK+ Q  Y+ S+ + F V+ TSRIPA  G     K D       NE   ++  REA+G+ MW +T +RP ++ AVRA AR
Sbjct:  582 QAYTHATLDEEVFLKRPAGCGEKLRKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRD-------NENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVAR 784          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.180e-30
Identity = 78/211 (36.97%), Postives = 121/211 (57.35%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+    +DEEV++ +P    +    + K  +AIYGL Q+G  W   + D +   GFEQ +ADP +FRK+VD  V M++++ +DDIL         E  A+ L  KF  ++LGE +++ G  + R+ +A  L++ Q  Y+ S+   F V+ TSRIPA  GA     G E + +E  E    +  REA+G+ MW +T +RP ++ AVRA AR
Sbjct:  885 QAYTHTTLDEEVFLRLPAGCGYKSHKIVKAERAIYGLKQSGRQWGYHVADTLVENGFEQCKADPCVFRKMVDEVVVMIIMIYVDDILVAGSDEDCEELLAS-LNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGA---DLGPEREDEEGGE----WPVREAIGSMMWVSTFSRPDVSFAVRAVAR 1087          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.420e-29
Identity = 77/211 (36.49%), Postives = 116/211 (54.98%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+++DDIL         E  A+    +F  ++LGE E++ G  + R+  A  LK+ Q  Y+ S+ + F V+ TSRIPA  G     K D+ K  E       +  RE +G+ MW +T +RP +  AVR  AR
Sbjct:  422 QAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDEDCEELLAS-FNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDDEKAGE-------WPVRETIGSMMWVSTFSRPDVLFAVRGVAR 624          
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 5.880e-29
Identity = 77/211 (36.49%), Postives = 118/211 (55.92%), Query Frame = 0
Query:   17 RAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAIYGLVQTGGCWNIKLCD-MTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDDILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLDQRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYREALGARMWTATMTRPGIACAVRADAR 226
            +A+  A +DEEV++++P         + K  +AIYGL Q+G  W     D +   GFEQ +ADP +FRK+VD  V M++V+ +DDIL         E  A+ L  KF  ++L E +++ G  + R+ +   L++ Q  Y+ S+ + F V+ TSRIPA  G     K D+ K  E       +  REA+G+ MW +T +RP ++ AVRA AR
Sbjct:  406 QAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS-LSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVAR 608          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5942.13576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE2.570e-3137.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.660e-3137.91Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.680e-3137.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.690e-3137.91Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE8.100e-3137.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJ03_9PHAE1.520e-3037.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBN2_9PHAE1.540e-3037.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1N9_9PHAE2.180e-3036.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1V1_9PHAE2.420e-2936.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE5.880e-2936.49Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 17..167
e-value: 5.7E-23
score: 81.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5942contigH-paniculata_contig5942:6381..7070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5942.13576.1mRNA_H-paniculata_contig5942.13576.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5942 6381..7070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5942.13576.1 ID=prot_H-paniculata_contig5942.13576.1|Name=mRNA_H-paniculata_contig5942.13576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MHREVLTYACDRIGEGRAFLKADVDEEVYIEIPETFQHCPAAMCKPNKAI
YGLVQTGGCWNIKLCDMTAIGFEQSRADPSMFRKVVDGEVEMVVVVNMDD
ILAHAKARATMEWFATHLGGKFKPEDLGEAEFYLGYHVTRNRKARELKLD
QRMYVQSIAEIFGVEKTSRIPAMSGALALSKGDEPKTQEKNEEMLKFQYR
EALGARMWTATMTRPGIACAVRADARFCKN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2