prot_H-paniculata_contig594.13575.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig594.13575.1
Unique Nameprot_H-paniculata_contig594.13575.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length326
Homology
[Close]
BLAST of mRNA_H-paniculata_contig594.13575.1 vs. uniprot
Match: D7FNR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR2_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 1.520e-136
Identity = 195/262 (74.43%), Postives = 220/262 (83.97%), Query Frame = 0 
Query:   54 FVRQPPNGLGSWRVESILDNGQEQTTSMFVFLFDDGSVHTAVSGEDNSGDQNDQAGRWRVTGNEFSLTVDRKSKSRMLEDLRYVGVLKKFKSSIEGCVIEGQMDPAVVGKFKMTPLVTSMAKDLKEAVAANDSQTYVVPKFPKAAIAGDWVLMWQDTGAVFQLRLSDDGMFESIKGMGSGQLGGRWNTWDADRMFMTVVRSRCSGVQMHGDHMFWGTEMIGPEESKIPLKISGYVMYGFLEPTCVGRFIMRRSQDGKADMGD 315
            F R  PNGLGSWRVES+LD   ++  SMFVFLFDDGSVHTAVSG D    ++D AGRWRV GNEFSLTV+RKS+SR L+DL+YVGVLKKF S +EG VIEGQMDPAVVGKFKMTP+ +SMA DLK+A  ANDS  YV PK+ KAAIAGDWVLMWQDTGAVF+L L +D  FES+KG+GSGQLGGRWN W  +RMFMTVVRS+  GVQMHGDHMFWGT++ GP +SKIPLKISGYVMYGFLEPTCVGRFIMRRSQ+G+    D
Sbjct:   34 FGRSTPNGLGSWRVESVLDT--QKPNSMFVFLFDDGSVHTAVSGTDG---KDDHAGRWRVRGNEFSLTVNRKSQSRFLDDLKYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERMFMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLEPTCVGRFIMRRSQEGRTSDED 290
[Close]
BLAST of mRNA_H-paniculata_contig594.13575.1 vs. uniprot
Match: A0A835YV66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV66_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.530e-70
Identity = 113/255 (44.31%), Postives = 164/255 (64.31%), Query Frame = 0 
Query:   56 RQPPNGLGSWRVESILDNGQEQTTSMFVFLFDDGSVHTAVSGEDNSGDQNDQAGRWRVTGNEFSLTVDRKSKSRMLEDLRYVGVLKKFKSSIEGCVIEGQMDPAVVGKFKMTPLVTSMAKDLKEAVAANDSQTYVVPKFPKAAIAGDWVLMWQDT----GAVFQLRLSDDGMFESIKGMGSG-QLGGRWNTWDADRMFMTVVRSRCSGVQMHGDHMFWGTEMIGPEESKIPLKISGYVMYGFLEPTCVGRFIMRR 305
            R+PP GLGSWR+ES +D   + T++ F+ LF+DG+ HTA+       D N++ GRWR   NEF L++  K+++ M EDLRY+G ++++   I G V EGQMDP VVG F+MTP+V SM+ DL       D Q  + P + K  ++G W+L+        G VF+L L++DG F S++G+G+G  L GRWNTWD ++  +TVVR +  G QM  DH +WG ++ G  +   P +I+G +MYG+LEPT +G F M R
Sbjct:   11 RRPPAGLGSWRLESHVD---DVTSTTFIVLFEDGTAHTAIL------DGNNEGGRWRYRANEFQLSITVKNRTGMKEDLRYIGQMQEYSGRIRGSVTEGQMDPFVVGDFQMTPVVASMSTDLMALARRRDEQQSITPLYSKKVLSGPWLLVHSGVSGLRGGVFELMLTEDGGFASVRGVGAGGMLAGRWNTWDREKFILTVVRLKSRGAQMTADHQYWGFKIHG--DGVTPTRITGEIMYGYLEPTSIGCFTMMR 254
[Close]
BLAST of mRNA_H-paniculata_contig594.13575.1 vs. uniprot
Match: A0A6H5LDX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX9_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.360e-49
Identity = 84/113 (74.34%), Postives = 95/113 (84.07%), Query Frame = 0 
Query:  135 RYVGVLKKFKSSIEGCVIEGQMDPAVVGKFKMTPLVTSMAKDLKEAVAANDSQTYVVPKFPKAAIAGDWVLMWQDTGAVFQLRLSDDGMFESIKGMGSGQLGGRWNTWDADRM 247
            RYVGVLKKF S +EG VIEGQMDPAVVGKFKMTP+ +SMA DLK+A  ANDS  YV PK+ KAAIAGDWVLMWQDTGAVF+L L +D  FES+KG+GSGQLGGRWN W  +R+
Sbjct:  229 RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERL 341
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig594.13575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNR2_ECTSI1.520e-13674.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV66_9STRA4.530e-7044.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LDX9_9PHAE1.360e-4974.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig594contigH-paniculata_contig594:22843..28178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig594.13575.1mRNA_H-paniculata_contig594.13575.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig594 21847..28216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig594.13575.1 ID=prot_H-paniculata_contig594.13575.1|Name=mRNA_H-paniculata_contig594.13575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MRLNGRVISTFTYALHVCVVKAFLCPSSSLFLSSTKLSQTSIQSDAGVVM
TTRFVRQPPNGLGSWRVESILDNGQEQTTSMFVFLFDDGSVHTAVSGEDN
SGDQNDQAGRWRVTGNEFSLTVDRKSKSRMLEDLRYVGVLKKFKSSIEGC
VIEGQMDPAVVGKFKMTPLVTSMAKDLKEAVAANDSQTYVVPKFPKAAIA
GDWVLMWQDTGAVFQLRLSDDGMFESIKGMGSGQLGGRWNTWDADRMFMT
VVRSRCSGVQMHGDHMFWGTEMIGPEESKIPLKISGYVMYGFLEPTCVGR
FIMRRSQDGKADMGDVPPEETVTQA*
back to top