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Homology
BLAST of mRNA_H-paniculata_contig5939.13572.1 vs. uniprot
Match: D8LL70_ECTSI (DUF4524 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL70_ECTSI) HSP 1 Score: 285 bits (730), Expect = 3.070e-78 Identity = 286/894 (31.99%), Postives = 375/894 (41.95%), Query Frame = 3
Query: 120 RLLLFENGAALGVFSKT------EGPTQEKTTSIVLEPTGTTFTLVLKDGTCLRQLSDYCKQAVLPQLSALTTFRNLHSARPYLSSRSRRKQHGLDDEAAAATPNTTTGSRRRDCRGV--SRIAVWPATADDAKRHCT--------VR-ADGSVELRALGGNARLVLSGLRSLVEVDFAT-----PDRHLQRRVWVTQQFLVSA--------VPPAFTHPLGVALR--------------------FVGHPPGLAEGRRAGGVLRAGGGRDNIPGGNGDGGRGSVSSELPLPEDMPDHPRWDMVKASSSGV----------YYGEQRH-------LISQLYSREAGDLFNGDEPGHLLAVDILKLAQGSGYAGTVAVIVDHYDGCTYRIVRNMAARVGTGVTEDGFGVHVVVHADGSEVLLEGDFIRLLHPASPANPRPRSHLLHVSATTTVCFSVTVPGLAVEIGDDLPPPRRLGLAATVCRNLDDXXXXXXEVNAINSGIIHSVSGTRLSHVVSISVGDITVRALAFRQQFVSWTKDRGRRGEQRLFSGVSPAMGRSRARLDPERWHQRGIASDAALGGGMENYPKLAPAFEHPMAAAVAEPRPSFVPLIVPAGSEQPSFPAGPY---CQDHXXXXXXXXXXXXXQKAHA----ATPAMNRELVVSAEVLEKIELGGASFVLFADGRARGAFRDRTIVSLPFPADC----SLRDGEGGKLIGGRFPVRTSGG------------------------DIECILPDGTVVRLNGHYLLQQRILGRDIGGISICDDSERRQGWRINETLLDAGDRCSHAKLLKPYVLAVRRFADWAAADPSERRAKSAQSRRICAAAIAEAERNRRFVDLRRLRQSSAVATA---ADGRGGVDKK 2486
R LLFENGAAL VF + + +++VLEP+G F V +DGTC RQLSD+C++ ++P ++A+++FRN HS RPYLS R H ++ ++ T SRIA WPA A+ RH T VR ADGSVE+RA GGNARL LS ++ EVD+A P RVWVT++FLV VPP F+H L VA+R ++ GR + AGG + G G+ RG V+ ELP PE+ PDH WD V+ S YYG++R ++ + A G G LL+VD++KLA G GYAG +A +V+ CTYRIV G E G GVHVVVHADGSEV LEGDF+RL+ P + A V A T A E G S+S+G+I RA+A RQQF L +PA A+ AA G P++ + RPS V + P+ PS + P ++ ++ A ++ + R S V+E +E GGASFV FADGRARG F DRTIV L P R G GG ++ECI DGTV+RL L ++ G GG +I AG C L+PYV+AV RFADWAA P++RRA + + AEAERNRRFVDL+ L +V RGG+D +
Sbjct: 6 RCLLFENGAALAVFGDDGDHHTRQSGDERGNSAVVLEPSGACFAEVRQDGTCHRQLSDFCRRDLIPHVAAVSSFRNAHSPRPYLSQRI----HATLEQETHSSNGTXXXXXXXXXXXXTPSRIAHWPAAAEPTCRHSTSNSSSTFVVRGADGSVEVRAAGGNARLALSASGTVAEVDYAVALPPGPGAAGGGRVWVTRRFLVGGSAAPPFDDVPPEFSHALSVAVRESRSAXXXXXXXXXXXXXXXXXXXXGDVSLGRVSPAAAAAGG---TVSGKGGE--RGLVAVELPRPEERPDHASWDTVQQGPSLDSHRDPLAPLGYYGDRRWCDGAAPTFATRAATASASAAAAG---GRLLSVDVMKLAGGQGYAGELAAVVESTGCCTYRIVVGGGGH-HRGAGEGGVGVHVVVHADGSEVWLEGDFVRLVRPPAAAG---------VPAMTAA---------AAEAGGGW---------------------------------------------TSMSLGNIASRAIALRQQF--------------LQCSGNPAA-----------------AAAAAAGRRGPGEPQV-----------TVKIRPSLVVVQPPSALSSPSSSSSPVEAVVRNAAAPRPTNKPYAPPEEGGARWLGSSSSRGRMAAGSPSVVESVERGGASFVAFADGRARGTFADRTIVCLGAPFFYRPLRGSRCGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVECIRADGTVLRLTRRSLDRRGSFGGRSGGGNI-----------------PAGGDCG-VGALRPYVVAVLRFADWAATHPADRRAAAGREAAXXXXXAAEAERNRRFVDLQLLAAKRSVPPPPLLCYHRGGLDPR 763
BLAST of mRNA_H-paniculata_contig5939.13572.1 vs. uniprot
Match: A0A6H5KVD6_9PHAE (DUF4524 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD6_9PHAE) HSP 1 Score: 282 bits (721), Expect = 3.280e-76 Identity = 307/986 (31.14%), Postives = 392/986 (39.76%), Query Frame = 3
Query: 120 RLLLFENGAALGVF--------SKTEGPTQEKTTSIVLEPTGTTFTLVLKDGTCLRQLSDYCKQAVLPQLSALTTFRNLHSARPYLSSRSRRKQHGLDDEAA--AATPNTTTGSRRRDCRGVSRIAVWPATADDAKRHC--------TVR-ADGSVELRALGGNARLVLSGLRSLVEVDFATP-------------------------------------------------------------------------------DRHLQRRVWVTQQFLVSA--------VPPAFTHPLGVALR------------------FVGHPPGLAEGR--RAGGVLRAGGGRDNIPGGNGDGGRGSVSSELPLPEDMPDHPRWDMVKASSSGV----------YYGEQRHLISQ---LYSREA-GDLFNGDEPGHLLAVDILKLAQGSGYAGTVAVIVDHYDGCTYRIVRNMAARVGTG-----VTEDGFGVHVVVHADGSEVLLEGDFIRLLHPASPANPRPRS----------HLLHVSATTTVCFSVTVPGLAVEIGDDLPPPRRLGLAATVCRNLDDXXXXXXEVNAINSGIIHSVSGTRLSHVVSISVGDITVRALAFRQQFVSWTKDRGRRGEQRLFSGVSPAMGRSRARLDPERWHQRGIASDAALGG--GMENYPKLA----PAFEHPMAAAVAEPRPSFVPLIVPAGSEQPSFPAG-PYCQDHXXXXXXXXXXXXXQKAHAATPAMNRELVVSAEVLEKIELGGASFVLFADGRARGAFRDRTIVSLPFP--------ADCSLRD------------GEGGKLIGGRFPVRTSGGD------------IECILPDGTVVRLNGHYLLQQRILGRDIGGISICDDSERRQGWRINETLLDAGDRCSHAKLLKPYVLAVRRFADWAAADPSERRAKSAQSRRICAAAIAEAERNRRFVDLRRLRQSSAVATA---ADGRGGVDKK 2486
R LLFENGAAL VF S + + +++VLEP+G FT V +DGTC RQLSD+C++ ++P ++A ++FRN HS RPYLS R H ++ ++ SRIA WPA A+ VR ADG VE+RA GGNARL LS ++ EVD+A RRVWVT++FLV VPP F+H L VA+R VG + GR A + A GG + GG G G V+ ELPLPE+ PDH WD + S YYG++R S +R A G G LL+VD+++LA+G GYAG +A++V+ GCTYRIV VG G E G GVHVVVHADGSEV LEG F+RL+ P L HVSA +TV F V P P R AA + V A + + G S+S+G IT RA+A RQQF+ + GIA+ AA G G ++ + P AA++ P S P+ AG+ P PY A +P+ V+E +E GGASFV FADGRARGAF DRTIVSL P + C G GG VR D IECI DGTV+RL H L ++ G GG + A C L+PYV+AV RFADWAA P++RRA + + AEAERNRRFVDL+ L +VA RGG D++
Sbjct: 24 RYLLFENGAALAVFGDRGDYHTSTRQSRNERGNSAVVLEPSGACFTQVRQDGTCHRQLSDFCRRDLIPHVAAASSFRNAHSPRPYLSQRI----HATLEQGPHNSSXXXXXXXXXXXXXXXPSRIAHWPAAAEPXXXXXXXXXXSTFVVRGADGRVEVRAAGGNARLTLSASGTVAEVDYAVALPPGPGAAXXXXXXXXXXXXXXXXXXXXWREGXXXXXXXXXXXXXXXXXGQQQENPGAAEGRVAANRSSRVDGEGFGXXXXXXSRRVWVTRRFLVGRSAAPPFDDVPPEFSHALSVAVRESQSAAATAAAAVETGRNSVGGGGDFSLGRVGPAAAAVAAAGGTVSRKGGEG----GLVAVELPLPEERPDHASWDTLHQGPSLDSHRDPLAPLGYYGDRRRCDSAAPTFAARSATGSASAAAAGGRLLSVDVMELAEGQGYAGELAIVVESTGGCTYRIV------VGDGGHHRRAGEGGVGVHVVVHADGSEVWLEGGFVRLVRPPXXXXXXXXXXXXXXXXXXXRLFHVSAASTVRFRVPSPRAEQH------PIGRPAAAAVAAASALGAPGIHQGVRATEAAAAEAGGGW-----TSMSLGAITSRAIALRQQFLRCS----------------------------------GIAATAAAAGIRGAGDHRDIVKIRPPRVVVQPPAALSSPSSSSSPVEAVAGNAAAPRPTTKPYAPPEAGGARWLGSPSSRGGTAAGSPS----------VVELVERGGASFVAFADGRARGAFADRTIVSLGAPVFYRPLRGSRCGGXXXXXXXXRGISYYGSGGPKGVATAVVRPGCSDVDEEEKEEEDREIECIRADGTVLRLTRHSLDRRGSFGGRSGGGNS-----------------PASGNCG-VGALRPYVVAVLRFADWAATHPADRRAAAGREAAGXXXXAAEAERNRRFVDLQLLAAKRSVAPPPLLCYHRGGPDQR 922
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Domain of unknown function DUF4524 |
| Ec32 ortholog | Ec-24_002720.1 |
| Exons | 6 |
| Model size | 3186 |
| Cds size | 2997 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5939.13572.1 >prot_H-paniculata_contig5939.13572.1 ID=prot_H-paniculata_contig5939.13572.1|Name=mRNA_H-paniculata_contig5939.13572.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=999bp
MRNRLFNPAQTAKHTPREPKCHIPMVSSRLLLFENGAALGVFSKTEGPTQ
EKTTSIVLEPTGTTFTLVLKDGTCLRQLSDYCKQAVLPQLSALTTFRNLH
SARPYLSSRSRRKQHGLDDEAAAATPNTTTGSRRRDCRGVSRIAVWPATA
DDAKRHCTVRADGSVELRALGGNARLVLSGLRSLVEVDFATPDRHLQRRV
WVTQQFLVSAVPPAFTHPLGVALRFVGHPPGLAEGRRAGGVLRAGGGRDN
IPGGNGDGGRGSVSSELPLPEDMPDHPRWDMVKASSSGVYYGEQRHLISQ
LYSREAGDLFNGDEPGHLLAVDILKLAQGSGYAGTVAVIVDHYDGCTYRI
VRNMAARVGTGVTEDGFGVHVVVHADGSEVLLEGDFIRLLHPASPANPRP
RSHLLHVSATTTVCFSVTVPGLAVEIGDDLPPPRRLGLAATVCRNLDDDD
DDDDEVNAINSGIIHSVSGTRLSHVVSISVGDITVRALAFRQQFVSWTKD
RGRRGEQRLFSGVSPAMGRSRARLDPERWHQRGIASDAALGGGMENYPKL
APAFEHPMAAAVAEPRPSFVPLIVPAGSEQPSFPAGPYCQDHHHHHHHHQ
QQYHHQKAHAATPAMNRELVVSAEVLEKIELGGASFVLFADGRARGAFRD
RTIVSLPFPADCSLRDGEGGKLIGGRFPVRTSGGDIECILPDGTVVRLNG
HYLLQQRILGRDIGGISICDDSERRQGWRINETLLDAGDRCSHAKLLKPY
VLAVRRFADWAAADPSERRAKSAQSRRICAAAIAEAERNRRFVDLRRLRQ
SSAVATAADGRGGVDKKAHRVEEVFTAETEACSHAGSAVGENDGNTHSQG
TPSTRLCYAGRNNRERNSLGGQSANVPVVVTPDSKSAELQGQENAQSRGK
ERVLLGQRRRVKFMEDEARLEGDKDISSGLDNDHHRSVLPPAETHRTVGD
IAGLTGAATAAVGTRERNEIVRRLLEANRDALLGGRASREVRVLRGMR* back to topmRNA from alignment at H-paniculata_contig5939:1043..9060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5939.13572.1 ID=mRNA_H-paniculata_contig5939.13572.1|Name=mRNA_H-paniculata_contig5939.13572.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8018bp|location=Sequence derived from alignment at H-paniculata_contig5939:1043..9060+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAGAGTTAGAGACAGACAGACAGAACGCTGAGAGATGAGAAACAGGCTT
TTTAATCCTGCACAAACTGCGAAACACACACCACGAGAGCCCAAGTGCCA
CATACCCATGGTGTCGAGTCGTCTTCTGCTGTTCGAGAACGGAGCGGCGC
TGGGGGTATTCTCTAAGACTGAAGGACCCACGCAGGAGAAGACAACGAGT
ATAGTACTGGAGCCCACAGGGACAACCTTTACTCTTGTCCTGAAGGTATG
TGACTGTGACATACTGTGTACGTCCGTTTTCACTTGGGACACAGCATTTA
CCTGACCCCGTGCTAGGCTCATTTGCGTCTATCTCTGTTGTACGCAGTAA
TGTGCATCGTAGTGCTCTCGTGCTCTCATGTGGTCCTGGTGAAATGCGGC
AAAACAGGAAACGATGAATAACTTAATGCTCTGTCTAAATTTGCTCTTTT
GTACCTTCAACGGCTAGTGACCATTTTGAATTGACTTTGTACAACAGTCG
TCTGTCACAGCAGCGCAAGACGTGACTTCTAGTCTGGAAACTACCTCTCT
GCCTCGGAGCTTTGACTGGGTTGCGAAGCTGCCTACCATAAGAGAGCGAA
GACATCAGCCATACGCCAGGGAGTACCATTGCCAATATATAGTAGTGAGA
AAGCTGTATTTATGACATATCCGTTTGTCTCTCTACATGATGCCAACAAT
ATACACCAGTTTCAAGTTGCACAATTTGCTGACGTATCACTCCCACCAAA
CCATACACCTTTACTACAAAACCAAAGGATGACACAGTATTTGACATAGA
GTATAATAACTGCTGTTTTACCTGCCAAACGGAGTTATCTTTCAATAATA
TTATTATTATTGCCTTCTGACAATTGCAGACTCAGAACTGACTTTGGGAA
TCTTGAAAAGTAAGCTCACAAAGTAAGAGAAATAAGCGGCAGACGAAACA
AGAAAAATTCAAACCTGATAATAACCACGCATTGTTCTCGAACACCCAAT
CTACAGCAAAACCTCTTGGGCGAAAAACTGTTGTCCCTCACTTGAGCACT
ATAAATATGTAACTTACGCTTACCAGTTCAAAACGTTCCGTATAGTGAAA
TCCCTCCGTTATCTAACAGAATAACATATGTAAAATAGAAAAATGATAAA
ACACGATGGTGAAACACTACGGCGCCGCTAAACTCCATCCCCATGCTCGA
GGATTGAGGGCCCCTTCTGCTGCATCTTGCCTTCCCCGCAGAGCCAGTCT
ATATCTTTGTACCCGTCTCGAGATGGCCGCCCGTGTAGTCACCGAAATGA
CCTGTTTCATCCGCTCCAGCAGCACTCCTTTCTGCGAAACCTCGTCGCCC
TCCTGTTCCCCCACCACGCTGGACTCCACCTGGGAGACGCTTGACGCGGT
AGGCGTTGATGGGAGCATCTCGGAGCTCTCCTGCCGGGACGACAATGTCC
ATCCGGTAGTCCCGGTCACGGTCCGCCGTAAACGGGTCTCCGTCCTCCAC
CGTGCTTCTGACGCTCCCGTCTTTCAATTTTCCTAGTTTGTTTCTGACGC
CTAAAGAGATGACCTGTCAAGACAGTTCGAACAATAGTCATTATAGGGTC
AGCCAGTTTGCAACCATGCCAACGGTGCCTTTCGCTTGTGACGCATCCCA
AAGTGCTGTAGTGACCTCGTTGAGAGGAACACAATGTATTGTGCTCTTGT
TCTCTTATAGTTGGCCATGATTACAAGGCTGCGTCAGTACCACAGGCAGG
TAGACTGAAAGCTGCACGTTGCAACGTGGATCCGGTGGGTTCACAAAAGA
AATACATAAATAGTGGCAACCTGTCCTCATCCTTACAATAATCTACACTG
ACTATGTACTACCCTCGCTATATGTATATTACACTCAAATTAGTAGTATT
TGACCACATCGATCGGTGTAGCTTCATTAATTGTCATTCCGGCACTTTAA
TTGCATCCCTCACATTTCATTGATTACAATGTACTCTGCACCGTCAAAAT
GTATCATATTATGTTTATCACCACCTTCAACAACGGCTCAAAAACGGCAT
GTCATGCAAAGGTGAAACAATAAACAGGTGAGGCACACAACAATGCTTTT
CTCTTATACTTATTATTATTTTTTTATTTTTTTTTATTTTTTATTTTTTT
ATTTTTTTAACTTTTTATCATTCACTATTTACTATTTACTATTTACCACT
TACTATTTACCACTTACTATTTACTATTTACTATTTACTATTTACCACTT
ACTATTTACTATTTACTATTTACCACTTACTATTTCTATTTTTTGTCGGA
TCCGGATAGACAATACTTGGAGGTTAACTGGCGATTCTGATCATCCTGTT
TTTCAGACGTTAATCGAATGGTCTTTTTATTATTATTATTATTATTTTTC
TTTAAATTGCCTTGTCTAGAGGCCACTTGTCTGGTGTACTCAAATAGAAA
AGCTGCTTCGAAACGACAAGGACAATATAATCTTAGCTGTACATACGATG
GATACAACACGCCAGCAGGGTTTAAAGGGCGCAAAAGCACTTGATAAGAA
GTAGGGTACGAAGATATAGTTGTTGCTGCCACCACCTGTGGTCAATTCTA
CCTGTATTCTGGAAATGATTCTCATCACGGACATAGCGAGACGTTCCACG
AATTTCACCGGCAATAGCCGTGGTCGAACTGCTCCAGTGTGCCGTAATTT
TGCCACTGTGTCTTACTTTCAACGTATTGCACTGTTTGTTTTGCCTCTGA
ATTATTTGTACAAATCGGTATGTTGAACAGGAACAAATGTAACCGCAACC
TTGCAACGAGGAGCCTCAAATTCCTCGCACGTTCTTATCATAAAAAAATA
TGCCATGTACATAAGCCAAGTAATGTAAGCATCTGGTCTCTACCCTGCAA
TTTTCGTTAAAAACCTACTTGCCTGCATACAACTGTCATAATATATCCTT
AATCTCTCGCTACCTGCCGCCTCCTCGCCCCTCGAAAGGACGGCACGTGC
CTGCGCCAACTCTCGGACTACTGCAAGCAAGCCGTCCTGCCCCAACTCTC
AGCCCTGACCACATTCAGGAACCTGCACTCCGCGCGCCCCTACCTATCCT
CGCGCTCGCGGCGGAAGCAGCACGGACTAGACGACGAGGCTGCTGCTGCT
ACTCCAAATACCACAACCGGCTCGTACCTTCACGTGACCGGGGGATTCGC
CAGTCCACCTTCCCACCAACGACGGCAACGACGTCACGCGTCCGCAATCG
GGCTTCAAAGCAGAGCGGGGAGCGCTCGCGGCTCGCGGAGTGCCAGCACT
AACGCCGAAGTTTTAACCGAGGTTTTGCCGCCGCGGGGCGTCAGTAGCGG
TGGCGTCGGCTGCGAGCGGTCCGGTGGCGTTGACGCGAACTGGACAAGGC
GGCGACGAGATTGCCGGGGAGTCTCGAGGATAGCCGTATGGCCGGCTACG
GCGGACGATGCAAAGCGGCACTGTACTGTTCGCGCGGACGGTAGCGTGGA
ACTTCGTGCTCTGGGAGGAAATGCGAGATTGGTTCTGTCTGGGCTGCGTA
GCTTGGTTGAGGTTGACTTCGCCACCCCGGTTGTTGATGAGTGTGGCAAT
GATGGTGCGGCAACGACAGCAGCAGGGGGTCGAAGGGAACCTTCTTGTTT
TTCTTTGAATACTACATCAACACAGCCGACTGATTATGGTGGTAGTAGAG
TGAGCTGGGAAGACTTGGAAGGAGGCGAGAGGAGGGAGGGAACTGCGGAC
GCGAACCGGTTGCGAGGGGGGATCGGCGACAAGGACCGCCACCTGCAGCG
TAGGGTATGGGTGACGCAGCAATTTTTGGTTTCTGCTGTACCGCCGGCGT
TTACGCACCCGCTTGGTGTCGCGCTACGCTTTGTTGGCCACCCGCCTGGG
CTCGCGGAAGGGCGAAGGGCCGGAGGCGTATTGAGGGCAGGGGGAGGCAG
GGACAATATCCCCGGGGGCAACGGTGATGGTGGTCGGGGGTCCGTGTCTT
CGGAGCTACCGCTGCCCGAGGACATGCCGGACCATCCCAGGTAGAGGTCT
GTAATAGAGTCAGTAGGGGGGTAAAGAGGTTCACCATGGTCGTGAGACTC
TTACCGATGTCTTTTTCGAAGGGCTCAAGTACAAGAGTTTTGGATTTTTT
TTTTTTTCGTTCAAATCCCTATAGTAGAAACTAGCTTTCTTCCCTGCTTT
TGGCGTCTGCTGGACTCGTACTACACTGGACTGAACTGTGTCATACTGGC
TGTGACGCACGTACCCGTCATGCGAGTATCTCAGTCTCTTCTCAAATCTA
GGATTCACCAGATGATTTTACCAGATACGGTACTTTTCCAACATAAAACA
AGCAATCTCTCGAAAAAGGGCGAGGTCATTCCCATGGTACGATGTTATCA
GTCATGATACATGGCAGTACGGCAAGGAAATGGTGTGGAAGTATCCTGGC
GTCATTCGGCTATCATCCCTCTCTTTTTGGTTGGGTGGTAGACGTGATTT
GTTCATTTTTTGTACGACCCGAAACATTTTTTGTACCATTGATGTTGTAC
TTCTGATTGGTCAGTGAATACTTCGCAGCTCGGATGAAGGTCATATTTTC
AAGTAAAAGCCGTTCATACAGCTTTGAGTCTTCAACCAACCCTCCTTTGT
GCTCAAAAATAGGCATAATATGCGCGGAGGTGCACCCATACTATAGAAGT
GGACACTTCACAAATCCCCAATATTTGTGTACTCCTCTGCGCGCATTCAC
GCACTCTCTGTTCTCCGGCGCATCCTCATGTTCTTTTCCCGGCCGGCTCA
GGTGGGACATGGTCAAAGCGTCAAGCTCAGGTGTGTACTACGGCGAGCAG
CGACATTTGATCAGTCAACTGTACTCCAGGGAAGCAGGCGATCTATTCAA
TGGCGATGAGCCCGGGCACCTGCTGGCAGTAGACATCCTGAAGCTAGCTC
AAGGAAGCGGCTACGCTGGTACCGTAGCAGTCATCGTAGACCACTACGAC
GGGTGTACCTATCGAATAGTGCGCAATATGGCTGCCAGGGTTGGGACGGG
AGTTACGGAAGACGGGTTTGGCGTGCACGTGAGTAGGTAGCTGGCGCAAC
ATGGACAGTAATTCCAGGTTAACGTAACATTTGTCTCTGATACCTGTCGG
GGCGTTGCAACTGAACAATGTCAGTAGTATTCATTTTCCGCTGTGTACTA
GAGTTACCGTCATGGGTTGTAGTGTGCGGTTTTGGTCTCAACACTTTTAT
TAGCTGTTTGCCGAGGCTCGACGTAGATGACGCTCTTGTTATCCGCGTTT
GGGCACCATCACGCTAATTTTCTCTCGTCCAGGGCACGTGAAGGGGACAG
CTCGTGCATGTATTGAGTGTGTACACAAGCGAACTATCTTCTTATCAGTA
TGATTTTTTTACCCAAGAGCATGCCTCCTGGATTTGTTAGCAAAATCTTA
ACCCACCACCATCAGTCGTACCTTGATACGTTTTTCCTGGAGAGATGTGT
GTATCTGTGCACTGTAGAGGCGGAAGTTAAATTCTGCACCAGGCCTCCAA
CGCTAGACCTACAGCAGTACAACAAAGTATCATGGCAAGCGTCTGCGGTA
ATGTTTCAATAGATAATATAGCCCGCCTTGACTACCTCTGAGACCCCTCG
TAGAGTCGAGTTCTTTTACTGTCTACCCTAGAGTTGACCATCGTTTCCTT
CACAGAGCATTGGAGTGATGCAATGATACCCCCTTATGAAGGTTGTCGTA
GCCTATGTCGTGCATAGTTGAAGAGATGCGAGATGTCCTAGGACTTGGTC
ATGGTGTCAAGATTGATGTAATATCAACAGGATCCTGTCGATCTACCAAG
CAACCTGCAAACCCAAATATCCGTCAAGTCCATCAAAAATTCAATTCACC
TGGCAAGAACGAGTGATTGAATTCCTCCCCCCCCTCCACCCTACCATCCA
CCCTACCATGCCCCCGCGCAAAAAAAGGTTGTCGTCCACGCAGACGGATC
AGAGGTCTTATTGGAAGGTGACTTCATTCGACTTCTGCACCCTGCATCCC
CGGCTAACCCTCGGCCAAGATCACACCTCCTTCACGTGTCCGCTACGACT
ACTGTCTGTTTCAGCGTCACCGTTCCCGGTTTGGCTGTAGAAATCGGCGA
TGATTTGCCGCCGCCGCGACGTTTGGGTTTGGCAGCTACTGTGTGCCGAA
ATCTCGACGACGACGACGACGACGACGACGAAGTTAATGCTATTAATTCA
GGTATTATTCACAGTGTCAGCGGCACCCGACTGAGTCACGTAGTGAGTAT
TTCGGTGGGAGACATCACGGTGCGCGCGCTGGCATTCAGACAGCAGTTTG
TTTCTTGGACGAAGGACCGAGGGCGGCGTGGAGAGCAGCGGTTGTTTTCC
GGAGTGTCTCCCGCCATGGGTCGAAGTCGTGCTCGTCTCGACCCAGAACG
CTGGCATCAACGCGGTATTGCTAGTGATGCTGCACTCGGCGGGGGCATGG
AAAATTACCCAAAGCTCGCTCCCGCTTTCGAGCACCCGATGGCGGCGGCG
GTGGCGGAACCACGCCCGTCGTTTGTGCCACTCATCGTACCGGCAGGTTC
AGAACAGCCGTCTTTCCCAGCAGGACCTTATTGCCAGGATCATCATCACC
ATCATCACCATCACCAACAGCAGTACCACCACCAGAAAGCCCATGCTGCT
ACCCCCGCGATGAACAGAGAGCTCGTCGTGTCTGCCGAGGTATTGGAAAA
AATTGAGCTCGGCGGCGCCTCGTTTGTGCTTTTCGCGGACGGTCGGGCGC
GCGGGGCGTTCCGTGACCGAACAATCGTCAGTTTGCCCTTCCCTGCCGAC
TGCTCTCTGAGAGACGGGGAGGGCGGCAAGTTGATCGGGGGTCGTTTTCC
CGTGCGAACATCGGGCGGGGATATTGAGTGTATTCTCCCGGACGGTACGG
TGGTGCGCTTGAACGGCCACTACTTATTGCAACAAAGAATTCTTGGGCGG
GACATCGGTGGTATCAGCATCTGCGACGATAGCGAGCGCCGACAAGGATG
GAGGATCAATGAGACGTTGTTAGACGCCGGCGACAGGTGCTCTCACGCGA
AGCTTCTCAAGCCATACGTACTTGCCGTGCGCCGGTTCGCGGACTGGGCT
GCCGCCGACCCATCCGAGCGCCGCGCGAAGTCCGCGCAGTCTCGACGCAT
TTGTGCCGCGGCGATCGCAGAGGCGGAAAGAAACCGACGATTCGTAGACC
TGAGGCGTCTACGACAATCGTCCGCCGTCGCCACCGCCGCCGATGGCCGC
GGCGGAGTGGACAAAAAAGCACATCGTGTTGAGGAGGTCTTCACGGCAGA
AACGGAGGCGTGTTCCCACGCTGGATCTGCAGTCGGAGAGAATGACGGAA
ATACTCACTCTCAGGGTACACCGAGCACACGATTATGTTATGCTGGGCGT
AATAATCGGGAGCGGAATTCTCTAGGGGGACAAAGTGCCAACGTTCCGGT
GGTAGTTACGCCAGACTCCAAATCGGCGGAGCTCCAGGGCCAGGAAAATG
CGCAGAGTCGAGGGAAGGAGAGGGTGCTACTGGGTCAACGCCGGCGAGTG
AAATTTATGGAAGACGAGGCCCGGTTGGAGGGTGATAAGGACATTTCTAG
CGGTCTGGATAATGACCATCACCGTAGCGTACTACCACCAGCGGAGACCC
ACCGAACAGTGGGAGACATTGCAGGATTAACAGGAGCAGCAACAGCAGCT
GTCGGTACGCGAGAGAGGAATGAGATAGTACGTCGGTTGTTAGAGGCTAA
CCGAGATGCCTTGTTGGGTGGTAGGGCGTCCCGAGAAGTCAGGGTTTTGC
GAGGGATGCGATAAGTTTTCCTCTAAAGTTTTTTTTTTTTTTAATTTTAT
GAAGCCAAGGCTGTATATAAGATACCCTTTCTTTTGCCTCCCCCTCTGCC
TTGGATTGGTTCTGATGAATGTACTCGACGAAGAGAGTTGGCTGTTTTCT
GGTACATAGCAATCCTGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5939:1043..9060+ >mRNA_H-paniculata_contig5939.13572.1 ID=mRNA_H-paniculata_contig5939.13572.1|Name=mRNA_H-paniculata_contig5939.13572.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5994bp|location=Sequence derived from alignment at H-paniculata_contig5939:1043..9060+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGAAACAGGCTTTTTAATCCTGCACAAACTGCGAAACACACACCACG
AGAGCCCAAGTGCCACATACCCATGGTGTCGAGTCGTCTTCTGCTGTTCG
AGAACGGAGCGGCGCTGGGGGTATTCTCTAAGACTGAAGGACCCACGCAG
GAGAAGACAACGAGTATAGTACTGGAGCCCACAGGGACAACCTTTACTCT
TGTCCTGAAGATGAGAAACAGGCTTTTTAATCCTGCACAAACTGCGAAAC
ACACACCACGAGAGCCCAAGTGCCACATACCCATGGTGTCGAGTCGTCTT
CTGCTGTTCGAGAACGGAGCGGCGCTGGGGGTATTCTCTAAGACTGAAGG
ACCCACGCAGGAGAAGACAACGAGTATAGTACTGGAGCCCACAGGGACAA
CCTTTACTCTTGTCCTGAAGGACGGCACGTGCCTGCGCCAACTCTCGGAC
TACTGCAAGCAAGCCGTCCTGCCCCAACTCTCAGCCCTGACCACATTCAG
GAACCTGCACTCCGCGCGCCCCTACCTATCCTCGCGCTCGCGGCGGAAGC
AGCACGGACTAGACGACGAGGCTGCTGCTGCTACTCCAAATACCACAACC
GGCTCGACGGCACGTGCCTGCGCCAACTCTCGGACTACTGCAAGCAAGCC
GTCCTGCCCCAACTCTCAGCCCTGACCACATTCAGGAACCTGCACTCCGC
GCGCCCCTACCTATCCTCGCGCTCGCGGCGGAAGCAGCACGGACTAGACG
ACGAGGCTGCTGCTGCTACTCCAAATACCACAACCGGCTCGCGGCGACGA
GATTGCCGGGGAGTCTCGAGGATAGCCGTATGGCCGGCTACGGCGGACGA
TGCAAAGCGGCACTGTACTGTTCGCGCGGACGGTAGCGTGGAACTTCGTG
CTCTGGGAGGAAATGCGAGATTGGTTCTGTCTGGGCTGCGTAGCTTGGTT
GAGGTTGACTTCGCCACCCCGGCGGCGACGAGATTGCCGGGGAGTCTCGA
GGATAGCCGTATGGCCGGCTACGGCGGACGATGCAAAGCGGCACTGTACT
GTTCGCGCGGACGGTAGCGTGGAACTTCGTGCTCTGGGAGGAAATGCGAG
ATTGGTTCTGTCTGGGCTGCGTAGCTTGGTTGAGGTTGACTTCGCCACCC
CGGACCGCCACCTGCAGCGTAGGGTATGGGTGACGCAGCAATTTTTGGTT
TCTGCTGTACCGCCGGCGTTTACGCACCCGCTTGGTGTCGCGCTACGCTT
TGTTGGCCACCCGCCTGGGCTCGCGGAAGGGCGAAGGGCCGGAGGCGTAT
TGAGGGCAGGGGGAGGCAGGGACAATATCCCCGGGGGCAACGGTGATGGT
GGTCGGGGGTCCGTGTCTTCGGAGCTACCGCTGCCCGAGGACATGCCGGA
CCATCCCAGGACCGCCACCTGCAGCGTAGGGTATGGGTGACGCAGCAATT
TTTGGTTTCTGCTGTACCGCCGGCGTTTACGCACCCGCTTGGTGTCGCGC
TACGCTTTGTTGGCCACCCGCCTGGGCTCGCGGAAGGGCGAAGGGCCGGA
GGCGTATTGAGGGCAGGGGGAGGCAGGGACAATATCCCCGGGGGCAACGG
TGATGGTGGTCGGGGGTCCGTGTCTTCGGAGCTACCGCTGCCCGAGGACA
TGCCGGACCATCCCAGGTGGGACATGGTCAAAGCGTCAAGCTCAGGTGTG
TACTACGGCGAGCAGCGACATTTGATCAGTCAACTGTACTCCAGGGAAGC
AGGCGATCTATTCAATGGCGATGAGCCCGGGCACCTGCTGGCAGTAGACA
TCCTGAAGCTAGCTCAAGGAAGCGGCTACGCTGGTACCGTAGCAGTCATC
GTAGACCACTACGACGGGTGTACCTATCGAATAGTGCGCAATATGGCTGC
CAGGGTTGGGACGGGAGTTACGGAAGACGGGTTTGGCGTGCACGTGGGAC
ATGGTCAAAGCGTCAAGCTCAGGTGTGTACTACGGCGAGCAGCGACATTT
GATCAGTCAACTGTACTCCAGGGAAGCAGGCGATCTATTCAATGGCGATG
AGCCCGGGCACCTGCTGGCAGTAGACATCCTGAAGCTAGCTCAAGGAAGC
GGCTACGCTGGTACCGTAGCAGTCATCGTAGACCACTACGACGGGTGTAC
CTATCGAATAGTGCGCAATATGGCTGCCAGGGTTGGGACGGGAGTTACGG
AAGACGGGTTTGGCGTGCACGTTGTCGTCCACGCAGACGGATCAGAGGTC
TTATTGGAAGGTGACTTCATTCGACTTCTGCACCCTGCATCCCCGGCTAA
CCCTCGGCCAAGATCACACCTCCTTCACGTGTCCGCTACGACTACTGTCT
GTTTCAGCGTCACCGTTCCCGGTTTGGCTGTAGAAATCGGCGATGATTTG
CCGCCGCCGCGACGTTTGGGTTTGGCAGCTACTGTGTGCCGAAATCTCGA
CGACGACGACGACGACGACGACGAAGTTAATGCTATTAATTCAGGTATTA
TTCACAGTGTCAGCGGCACCCGACTGAGTCACGTAGTGAGTATTTCGGTG
GGAGACATCACGGTGCGCGCGCTGGCATTCAGACAGCAGTTTGTTTCTTG
GACGAAGGACCGAGGGCGGCGTGGAGAGCAGCGGTTGTTTTCCGGAGTGT
CTCCCGCCATGGGTCGAAGTCGTGCTCGTCTCGACCCAGAACGCTGGCAT
CAACGCGGTATTGCTAGTGATGCTGCACTCGGCGGGGGCATGGAAAATTA
CCCAAAGCTCGCTCCCGCTTTCGAGCACCCGATGGCGGCGGCGGTGGCGG
AACCACGCCCGTCGTTTGTGCCACTCATCGTACCGGCAGGTTCAGAACAG
CCGTCTTTCCCAGCAGGACCTTATTGCCAGGATCATCATCACCATCATCA
CCATCACCAACAGCAGTACCACCACCAGAAAGCCCATGCTGCTACCCCCG
CGATGAACAGAGAGCTCGTCGTGTCTGCCGAGGTATTGGAAAAAATTGAG
CTCGGCGGCGCCTCGTTTGTGCTTTTCGCGGACGGTCGGGCGCGCGGGGC
GTTCCGTGACCGAACAATCGTCAGTTTGCCCTTCCCTGCCGACTGCTCTC
TGAGAGACGGGGAGGGCGGCAAGTTGATCGGGGGTCGTTTTCCCGTGCGA
ACATCGGGCGGGGATATTGAGTGTATTCTCCCGGACGGTACGGTGGTGCG
CTTGAACGGCCACTACTTATTGCAACAAAGAATTCTTGGGCGGGACATCG
GTGGTATCAGCATCTGCGACGATAGCGAGCGCCGACAAGGATGGAGGATC
AATGAGACGTTGTTAGACGCCGGCGACAGGTGCTCTCACGCGAAGCTTCT
CAAGCCATACGTACTTGCCGTGCGCCGGTTCGCGGACTGGGCTGCCGCCG
ACCCATCCGAGCGCCGCGCGAAGTCCGCGCAGTCTCGACGCATTTGTGCC
GCGGCGATCGCAGAGGCGGAAAGAAACCGACGATTCGTAGACCTGAGGCG
TCTACGACAATCGTCCGCCGTCGCCACCGCCGCCGATGGCCGCGGCGGAG
TGGACAAAAAAGCACATCGTGTTGAGGAGGTCTTCACGGCAGAAACGGAG
GCGTGTTCCCACGCTGGATCTGCAGTCGGAGAGAATGACGGAAATACTCA
CTCTCAGGGTACACCGAGCACACGATTATGTTATGCTGGGCGTAATAATC
GGGAGCGGAATTCTCTAGGGGGACAAAGTGCCAACGTTCCGGTGGTAGTT
ACGCCAGACTCCAAATCGGCGGAGCTCCAGGGCCAGGAAAATGCGCAGAG
TCGAGGGAAGGAGAGGGTGCTACTGGGTCAACGCCGGCGAGTGAAATTTA
TGGAAGACGAGGCCCGGTTGGAGGGTGATAAGGACATTTCTAGCGGTCTG
GATAATGACCATCACCGTAGCGTACTACCACCAGCGGAGACCCACCGAAC
AGTGGGAGACATTGCAGGATTAACAGGAGCAGCAACAGCAGCTGTCGGTA
CGCGAGAGAGGAATGAGATAGTACGTCGGTTGTTAGAGGCTAACCGAGAT
GCCTTGTTGGGTGGTAGGGCGTCCCGAGAAGTCAGGGTTTTGCGAGGGAT
GCGATAAGTTGTCGTCCACGCAGACGGATCAGAGGTCTTATTGGAAGGTG
ACTTCATTCGACTTCTGCACCCTGCATCCCCGGCTAACCCTCGGCCAAGA
TCACACCTCCTTCACGTGTCCGCTACGACTACTGTCTGTTTCAGCGTCAC
CGTTCCCGGTTTGGCTGTAGAAATCGGCGATGATTTGCCGCCGCCGCGAC
GTTTGGGTTTGGCAGCTACTGTGTGCCGAAATCTCGACGACGACGACGAC
GACGACGACGAAGTTAATGCTATTAATTCAGGTATTATTCACAGTGTCAG
CGGCACCCGACTGAGTCACGTAGTGAGTATTTCGGTGGGAGACATCACGG
TGCGCGCGCTGGCATTCAGACAGCAGTTTGTTTCTTGGACGAAGGACCGA
GGGCGGCGTGGAGAGCAGCGGTTGTTTTCCGGAGTGTCTCCCGCCATGGG
TCGAAGTCGTGCTCGTCTCGACCCAGAACGCTGGCATCAACGCGGTATTG
CTAGTGATGCTGCACTCGGCGGGGGCATGGAAAATTACCCAAAGCTCGCT
CCCGCTTTCGAGCACCCGATGGCGGCGGCGGTGGCGGAACCACGCCCGTC
GTTTGTGCCACTCATCGTACCGGCAGGTTCAGAACAGCCGTCTTTCCCAG
CAGGACCTTATTGCCAGGATCATCATCACCATCATCACCATCACCAACAG
CAGTACCACCACCAGAAAGCCCATGCTGCTACCCCCGCGATGAACAGAGA
GCTCGTCGTGTCTGCCGAGGTATTGGAAAAAATTGAGCTCGGCGGCGCCT
CGTTTGTGCTTTTCGCGGACGGTCGGGCGCGCGGGGCGTTCCGTGACCGA
ACAATCGTCAGTTTGCCCTTCCCTGCCGACTGCTCTCTGAGAGACGGGGA
GGGCGGCAAGTTGATCGGGGGTCGTTTTCCCGTGCGAACATCGGGCGGGG
ATATTGAGTGTATTCTCCCGGACGGTACGGTGGTGCGCTTGAACGGCCAC
TACTTATTGCAACAAAGAATTCTTGGGCGGGACATCGGTGGTATCAGCAT
CTGCGACGATAGCGAGCGCCGACAAGGATGGAGGATCAATGAGACGTTGT
TAGACGCCGGCGACAGGTGCTCTCACGCGAAGCTTCTCAAGCCATACGTA
CTTGCCGTGCGCCGGTTCGCGGACTGGGCTGCCGCCGACCCATCCGAGCG
CCGCGCGAAGTCCGCGCAGTCTCGACGCATTTGTGCCGCGGCGATCGCAG
AGGCGGAAAGAAACCGACGATTCGTAGACCTGAGGCGTCTACGACAATCG
TCCGCCGTCGCCACCGCCGCCGATGGCCGCGGCGGAGTGGACAAAAAAGC
ACATCGTGTTGAGGAGGTCTTCACGGCAGAAACGGAGGCGTGTTCCCACG
CTGGATCTGCAGTCGGAGAGAATGACGGAAATACTCACTCTCAGGGTACA
CCGAGCACACGATTATGTTATGCTGGGCGTAATAATCGGGAGCGGAATTC
TCTAGGGGGACAAAGTGCCAACGTTCCGGTGGTAGTTACGCCAGACTCCA
AATCGGCGGAGCTCCAGGGCCAGGAAAATGCGCAGAGTCGAGGGAAGGAG
AGGGTGCTACTGGGTCAACGCCGGCGAGTGAAATTTATGGAAGACGAGGC
CCGGTTGGAGGGTGATAAGGACATTTCTAGCGGTCTGGATAATGACCATC
ACCGTAGCGTACTACCACCAGCGGAGACCCACCGAACAGTGGGAGACATT
GCAGGATTAACAGGAGCAGCAACAGCAGCTGTCGGTACGCGAGAGAGGAA
TGAGATAGTACGTCGGTTGTTAGAGGCTAACCGAGATGCCTTGTTGGGTG
GTAGGGCGTCCCGAGAAGTCAGGGTTTTGCGAGGGATGCGATAA back to top
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