prot_H-paniculata_contig59335.13564.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA) HSP 1 Score: 117 bits (292), Expect = 2.170e-27 Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAGHR-EKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
RS DSC+Y + +GG LL+ YVDD++IA ++D K ++ F MKD+G+ SR+LGI+++RDR G + +SQ SY+ +V+KR+ E + V TP G K+SA + SE Y VGS+MYA G RP+IAYA+ +R M P
Sbjct: 1014 RSHQDSCVYVKKVEGGYVYLLL--YVDDMLIAAKEMAEIDRLKSALSSEFEMKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSAVKEV---SECIDTEKYPYSSAVGSVMYAMIGTRPDIAYAIGLISRFMSKP 1168
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 116 bits (291), Expect = 2.990e-27 Identity = 70/163 (42.94%), Postives = 93/163 (57.06%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAG-HREKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQK---SGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
R +++CLY RDD G+ LV VYVDDL++A R +DE K+ + F+M+DLG S +LGI +RRDRP I +SQ YI VL RYG +C+ TP VK SA + D + G S Y ++GS+MYA G RP+IAY V R +P
Sbjct: 1155 RLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANP 1316
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A2K3N065_TRIPR (Copia LTR rider n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N065_TRIPR) HSP 1 Score: 114 bits (286), Expect = 1.390e-26 Identity = 64/160 (40.00%), Postives = 97/160 (60.62%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAGHR-EKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
RS D C+YF R G + +++ +YVDD++IA + E V K +N+ F MKDLG+ SR+LGI++RRDR + +SQ +Y+R++L+++G + V TP + K+S + E+ S Y +VGSLMYA RP+IAYAV +R M +P
Sbjct: 969 RSQFDHCVYF-RFRPGNSFVILLLYVDDILIASNNVEDVTRVKAELNKEFDMKDLGAASRILGIDIRRDRKKSKLCLSQEAYLRKILEKFGMSNSKPVVTPTNPQFKLSIDQCPSTDVERAYMNSIPYANIVGSLMYAMVCTRPDIAYAVSLVSRYMANP 1127
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A2U1MW82_ARTAN (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MW82_ARTAN) HSP 1 Score: 111 bits (277), Expect = 2.250e-25 Identity = 60/160 (37.50%), Postives = 95/160 (59.38%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAG-HREKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
R + D C+Y + G LV +YVDD++IA +++++ E K ++ F MKDLG+ ++LG+E+RRDR G +T+SQ YI +VLKR+ C+ + TP K+S+ E +++ + Y VGSLMYA RP++A+AV +R M +P
Sbjct: 940 RCSYDECVYLRKFPDGSFLYLV-LYVDDMLIAAPNKDQIRELKDQLSNEFDMKDLGAAKKILGMEIRRDRKMGKLTLSQSDYISKVLKRFNMSNCKPILTPLAPHFKLSSHECPKSEEDKEDMSLVPYSSAVGSLMYAMVCTRPDLAHAVSVVSRYMHNP 1098
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 110 bits (274), Expect = 4.890e-25 Identity = 59/159 (37.11%), Postives = 96/159 (60.38%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAGHREKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
RS D C+++ R++ LL+A+ VDD IAG + V FK+ I+ F+M DLG + +LGIEV+RDR T+++SQ YI +L R+ + + + TP + +S + P + + + YR ++GSLMYA+ G RP+IAYA+ ++ M++P
Sbjct: 286 RSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNP 444
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A1J3IYK5_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IYK5_NOCCA) HSP 1 Score: 108 bits (270), Expect = 5.150e-25 Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIA-GHREKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
RS D C+Y R+ E + + +YVDD++IA G ++ K +++ F MKD+G SR+LG+++ RDR GT+ +SQ SYI +VLK +G E + TP ++ + ++ E + Y VGSLMYA G+RP+IAYAV +R M +P
Sbjct: 65 RSEYDQCVYM-RNIHNEKAVYLLLYVDDILIASGSMSEIRSVKDSLSSKFEMKDMGKASRILGMDIIRDRERGTLQLSQESYIEKVLKTFGMTEAKPTTTPLATHFRLKSLTKDERKEEAVHMEDTPYASAVGSLMYAMIGSRPDIAYAVGVISRFMSNP 223
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A6D2J1R0_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J1R0_9BRAS) HSP 1 Score: 109 bits (273), Expect = 7.790e-25 Identity = 63/160 (39.38%), Postives = 94/160 (58.75%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAGHR-EKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
RS D+C+Y + D G LL+ YVD +++A ++++ K+ ++ F MKDLG+ SR+LGI+++RDR G + +SQ Y+ +V+KR+ E + V TP G K+SA A SE Y VGSLMYA G RP++AYA+ +R M P
Sbjct: 1019 RSERDTCVYVKKVDQGFVYLLL--YVDGMLLAAKEMTEIEKLKKVLSSEFEMKDLGAASRILGIDIKRDRKEGVLWLSQSGYLGKVIKRFNMVEAKTVNTPMGGHFKLSAVSDA---SECVDTEKVPYSSAVGSLMYAMVGTRPDLAYAIGLVSRFMSKP 1173
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A0G4IXE9_PLABS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IXE9_PLABS) HSP 1 Score: 109 bits (272), Expect = 7.840e-25 Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAGHREKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISA---PES-ADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
R+ + SCLYF R G ++V VYVDD+ I GH E V E K +++ F+M D+G L V+G +V DR G++ +SQ Y + +L YG E R V TPA+ +K+S P++ AD+ G YR VG LM+ RP+IAYAV++ +R ++DP
Sbjct: 185 RAKSASCLYFKRGPTGRL-VIVGVYVDDIPIVGHPELVQETKSALSKRFKMSDMGELQSVIGFDV--DRQGGSVFLSQERYTKTILDTYGMAESRPVSTPADANLKLSTSLCPQNQADRELAALEGQRINYRAAVGHLMWL-LHTRPDIAYAVNEVSRYVQDP 343
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A3P3Y0G8_PLABS (Integrase catalytic domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y0G8_PLABS) HSP 1 Score: 109 bits (272), Expect = 1.060e-24 Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = 0
Query: 1 RSTTDSCLYFSRDDGGETNLLVAVYVDDLVIAGHREKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISA---PES-ADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
R+ + SCLYF R G ++V VYVDD+ I GH E V E K +++ F+M D+G L V+G +V DR G++ +SQ Y + +L YG E R V TPA+ +K+S P++ AD+ G YR VG LM+ RP+IAYAV++ +R ++DP
Sbjct: 809 RAKSASCLYFKRGPTGRL-VIVGVYVDDIPIVGHPELVQETKSALSKRFKMSDMGELQSVIGFDV--DRQGGSVFLSQERYTKTILDTYGMAESRPVSTPADANLKLSTSLCPQNQADRELAALEGQRINYRAAVGHLMWL-LHTRPDIAYAVNEVSRYVQDP 967
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Match: A0A7M5XDS1_9CNID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XDS1_9CNID) HSP 1 Score: 103 bits (256), Expect = 1.860e-24 Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 5 DSCLYFSRDDGGETN--LLVAVYVDDLVIAGHR-EKVDEFKQNINQHFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGKVKISAPESADKPSEQKSGTSSEYRGMVGSLMYASTGARPEIAYAVHQAARRMEDP 159
D C+Y +T +++AVYVDD +A + ++ K+N+ + F M D G ++ +LG+ VRRDR G I I Q +Y+R VL+R+G DECR + TP E +KP KS Y+ +GSL+YAS G RP+++Y+V ++ M P
Sbjct: 35 DPCVYSKCIKESDTTSLIIIAVYVDDFTLASNDINLLEREKKNLAEKFDMVDQGEINYILGMRVRRDRQAGIIRIDQSAYLRNVLQRFGMDECRPISTPMETGKSFEKLAPDEKPVNLKS-----YQAAIGSLIYASIGTRPDLSYSVGVLSQYMSHP 187 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59335.13564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig59335.13564.1 ID=prot_H-paniculata_contig59335.13564.1|Name=mRNA_H-paniculata_contig59335.13564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bpback to top |