mRNA_H-paniculata_contig5930.13563.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5930.13563.1
Unique NamemRNA_H-paniculata_contig5930.13563.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: D8LC32_ECTSI (DUF4110 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC32_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 7.190e-186
Identity = 249/300 (83.00%), Postives = 278/300 (92.67%), Query Frame = 1 
Query:   94 KDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            +DAREA ED+IEAILA+IL+KE ++TAVTVTVC+ PPSPRANFTVTSLP+GDM+LFGGE FDG DTKCF +LFRWNVEKNEWRQIESPNTPPPRCSHQAA+FR+HLYV GGEFATT+QF HYKDFWRL++KTNAWE+L  +GK+PS RSGHRMVVWRNQLVLFGGF+EA R T WFNDLY+M FQDL WR+++ P T TIPAPRSGHQMAV+  G+QIFLYGG+SKEKEPGQKKEGKTHNDMWVLNMK A+SGGNPTWDR+GKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHA+R
Sbjct:   15 QDAREAGEDDIEAILADILQKEAKQTAVTVTVCDGPPSPRANFTVTSLPSGDMILFGGECFDGQDTKCFKDLFRWNVEKNEWRQIESPNTPPPRCSHQAAYFRDHLYVFGGEFATTDQFRHYKDFWRLNVKTNAWEQLETSGKSPSVRSGHRMVVWRNQLVLFGGFHEASRVTSWFNDLYIMGFQDLKWRRIEFPATATIPAPRSGHQMAVYAPGEQIFLYGGYSKEKEPGQKKEGKTHNDMWVLNMKPAVSGGNPTWDRIGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHALR 314
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A836CMD6_9STRA (DUF4110 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD6_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 6.180e-150
Identity = 193/279 (69.18%), Postives = 239/279 (85.66%), Query Frame = 1 
Query:  154 KEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAV 990
            K+ +KTAVTVT C++PPSPRAN+++TSLP+GDMV+FGGEYFDG DT C+NEL+RWN+EK EWR+IESPNTPPPRCSHQA F+R+H+Y+ GGEFAT+EQFYHYKD WRLD+KTN+WE + + G+ PSARSGHRM V+RN L+LFGGFYEA R+ KW+NDLY+M+FQD+ WR+++ PVT   P PRSGHQ+A+H    ++FLYGG+SK KEPGQ+ EGK HNDMWVLN++  + GG P WDR+GK+GAPPS RSGAAM VHK+RALLFGGVLD E  QH +
Sbjct:   40 KDAEKTAVTVTPCDAPPSPRANYSMTSLPSGDMVMFGGEYFDGEDTMCYNELYRWNMEKGEWRRIESPNTPPPRCSHQAVFYRDHIYIFGGEFATSEQFYHYKDLWRLDVKTNSWENVELLGRPPSARSGHRMAVYRNFLILFGGFYEAAREVKWYNDLYVMSFQDMRWRRIEVPVTAVQPQPRSGHQIAIHESASEMFLYGGYSKVKEPGQRSEGKVHNDMWVLNLQPLLGGGTPMWDRIGKRGAPPSQRSGAAMVVHKSRALLFGGVLDQERAQHTM 318
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A1W0A6K9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6K9_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 2.990e-135
Identity = 180/301 (59.80%), Postives = 234/301 (77.74%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+T+ V  + PSPRANF+++S+PN D+++FGGEYFDG   +CFNEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLY+ GGEFAT +QFYH++D WRLD+KTNAWE +   G  PS RSGHRM+VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV  TIP PRSG Q+AV    D IF+YGG++K K  G+K EGK + DMW LNM   I   +PTW+++ +KG  PS RSGA MTV+KNRA+LFGGV D EG +H ++
Sbjct:   29 SKEAKDAGEEDIEAILNEFMKKDAAKVAITI-VPTTQPSPRANFSLSSMPNNDLLMFGGEYFDGECNECFNELYRWNLETNEWKLISSPNTPPPRCSHQSVVYRDHLYIFGGEFATADQFYHHRDLWRLDLKTNAWECIESKG-GPSPRSGHRMIVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKISFPVHKTIPGPRSGCQLAVLPSKDTIFMYGGYAKVKNVGEKSEGKVYTDMWALNMAPVIKYQDPTWEKLSRKGHAPSPRSGATMTVYKNRAILFGGVYDEEGRRHELK 327
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A6A5A5E2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A5E2_9STRA)

HSP 1 Score: 389 bits (998), Expect = 2.900e-131
Identity = 177/301 (58.80%), Postives = 228/301 (75.75%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+ V V    PSPRANF+++S+ NGD+++FGGEYFDG    C+NEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLYV GGEFAT +QFYHY+D WRLD+KTN+WE L   G  PS RSGHRM VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV    PAPRSG Q+AV    D IF+YGG++K K  G+K EGK + D+W L+M   I   +PTW+++ +KG  PS RSGA M V+KNRA+LFGGV D EG +H ++
Sbjct:   33 SKEAKDAGEEDIEAILQEFMKKDAAKVAIAV-VPSLQPSPRANFSLSSMVNGDLLMFGGEYFDGECNVCYNELYRWNLEANEWKLISSPNTPPPRCSHQSVVYRDHLYVFGGEFATADQFYHYRDLWRLDLKTNSWECLEGKG-GPSPRSGHRMTVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKISLPVHKASPAPRSGCQLAVMASNDTIFMYGGYAKVKNVGEKAEGKVYTDIWALHMAPVIKAQDPTWEKLSRKGHAPSPRSGATMAVYKNRAILFGGVFDEEGRRHELK 331
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A067CA73_SAPPC (DUF4110 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CA73_SAPPC)

HSP 1 Score: 397 bits (1019), Expect = 5.160e-130
Identity = 179/301 (59.47%), Postives = 232/301 (77.08%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            +K+A++A E++IEAIL E +KK+  K A+T+ V  + PSPRANF++ S+PN D++LFGGEYFDG   +CFNEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLY+ GGEFAT +QFYH++D WRLD+KTNAWE +   G  PS RSGHRM+VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV  T P PRSG Q+AV    D IF+YGG++K K  G+K EGK + DMW LNM   I   +PTW+++ +KG  PS RSGA MTV+KNRA+LFGGV D EG +H ++
Sbjct:   33 TKEAKDAGEEDIEAILNEFMKKDAAKVAITI-VPTTQPSPRANFSLCSMPNNDLLLFGGEYFDGECNECFNELYRWNLETNEWKLISSPNTPPPRCSHQSVVYRDHLYIFGGEFATADQFYHHRDLWRLDLKTNAWECIESKG-GPSPRSGHRMIVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKISFPVHKTTPGPRSGCQLAVLPSKDTIFMYGGYAKIKNVGEKSEGKVYTDMWALNMAPVIKNQDPTWEKLSRKGHAPSPRSGATMTVYKNRAILFGGVFDEEGRRHELK 331
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A6G0WUG0_9STRA (DUF4110 domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUG0_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 2.750e-129
Identity = 179/301 (59.47%), Postives = 232/301 (77.08%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+T+ V  S PSPRANF+++S+ NGD+++FGGEYFDG    C+NEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLY+ GGEFAT +QFYHY+D WRLD+KTN+WE L   G  PS RSGHRM VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV    PAPRSG Q+AV    D IF+YGG++K K  G+K EGK + D+W L+M   I   +PTW+R+ +KG PP+ RSGA MTV+KNRA+LFGGV D EG +H ++
Sbjct:   33 SKEAKDAGEEDIEAILQEFMKKDAAKVAITI-VPTSQPSPRANFSLSSMINGDLLMFGGEYFDGECNVCYNELYRWNLEANEWKLISSPNTPPPRCSHQSVVYRDHLYIFGGEFATADQFYHYRDLWRLDLKTNSWECLEGKG-GPSPRSGHRMTVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKITFPVHKATPAPRSGCQLAVMASTDTIFMYGGYAKVKNVGEKAEGKVYTDIWALHMAPIIKNQDPTWERLSRKGHPPTPRSGATMTVYKNRAILFGGVFDEEGRRHELK 331
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A1V9YDE6_9STRA (DUF4110 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDE6_9STRA)

HSP 1 Score: 393 bits (1010), Expect = 1.060e-128
Identity = 177/301 (58.80%), Postives = 232/301 (77.08%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+T+ V    PSPRANF+++S+PN D++LFGGEYFDG   +CFNEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLY+ GGEFAT +QFYH++D WRLD+KTNAWE +   G  PS RSGHRM+VWRN LV+FGGFYEA R+TKWF+DL++ NF DL W+++  PV  + P PRSG Q+AV    D IF+YGG++K K  G+K EGK + DMW LNM   I   +PTW+++ +KG  P+ RSGA MTV+KNRA+LFGGV D EG +H ++
Sbjct:   32 SKEAKDAGEEDIEAILNEFMKKDAAKVAITI-VPTVQPSPRANFSLSSMPNNDLLLFGGEYFDGECNECFNELYRWNIETNEWKLISSPNTPPPRCSHQSVVYRDHLYIFGGEFATADQFYHHRDLWRLDLKTNAWECIESKG-GPSPRSGHRMIVWRNYLVVFGGFYEAARETKWFSDLFLFNFADLKWKKITFPVHKSTPGPRSGCQLAVLPAKDTIFMYGGYAKIKNVGEKSEGKVYTDMWALNMAPVIKNQDPTWEKLSRKGHAPTPRSGATMTVYKNRAILFGGVFDEEGRRHELK 330
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: A0A024U8N4_9STRA (DUF4110 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8N4_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 3.610e-128
Identity = 178/301 (59.14%), Postives = 230/301 (76.41%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+T+ V    PSPRANF+++S+ NGD+++FGGEYFDG    C+NEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLYV GGEFAT +QFYHY+D WRLD+KTN+WE L   G  PS RSGHRM VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV    PAPRSG Q+AV    D IF+YGG++K K  G+K EGK + D+W L+M   I   +PTW+++ +KG  PS RSGA MTV+KNRA+LFGGV D EG +H ++
Sbjct:   33 SKEAKDAGEEDIEAILQEFMKKDAAKVAITI-VPSLQPSPRANFSLSSMINGDLLMFGGEYFDGECNVCYNELYRWNIEANEWKLISSPNTPPPRCSHQSVVYRDHLYVFGGEFATADQFYHYRDLWRLDLKTNSWECLDGKG-GPSPRSGHRMTVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKISFPVHKATPAPRSGCQLAVMSSNDTIFMYGGYAKVKNVGEKAEGKVYTDIWALHMGPIIKSQDPTWEKLSRKGHAPSPRSGATMTVYKNRAILFGGVFDEEGRRHELK 331
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: W4GXH2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXH2_9STRA)

HSP 1 Score: 389 bits (999), Expect = 4.600e-127
Identity = 178/301 (59.14%), Postives = 228/301 (75.75%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+ V V    PSPRANF+++S+ NGD+++FGGEYFDG    C+NEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLYV GGEFAT +QFYHY+D WRLD+KTN+WE L   G  PS RSGHRM VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV    PAPRSG Q+AV    D IF+YGG++K K  G+K EGK + D+W L+M   I   +PTW+++ +KG  PS RSGA M V+KNRALLFGGV D EG +H ++
Sbjct:   33 SKEAKDAGEEDIEAILQEFMKKDAAKVAIAV-VPSLQPSPRANFSLSSMVNGDLLMFGGEYFDGECNVCYNELYRWNLEANEWKLISSPNTPPPRCSHQSVVYRDHLYVFGGEFATADQFYHYRDLWRLDLKTNSWECLEGKG-GPSPRSGHRMTVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKISLPVHKASPAPRSGCQLAVMASNDTIFMYGGYAKVKNVGEKAEGKVYTDIWALHMAPIIKAQDPTWEKLSRKGHAPSPRSGATMAVYKNRALLFGGVFDEEGRRHELK 331
[Close]
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Match: W4GXS6_9STRA (DUF4110 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXS6_9STRA)

HSP 1 Score: 389 bits (999), Expect = 5.120e-127
Identity = 178/301 (59.14%), Postives = 228/301 (75.75%), Query Frame = 1 
Query:   91 SKDAREASEDNIEAILAEILKKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCFNELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQFYHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEAFRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIFLYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPSIRSGAAMTVHKNRALLFGGVLDHEGPQHAVR 993
            SK+A++A E++IEAIL E +KK+  K A+ V V    PSPRANF+++S+ NGD+++FGGEYFDG    C+NEL+RWN+E NEW+ I SPNTPPPRCSHQ+  +R+HLYV GGEFAT +QFYHY+D WRLD+KTN+WE L   G  PS RSGHRM VWRN LV+FGGFYEA R+TKWFNDL++ NF DL W+++  PV    PAPRSG Q+AV    D IF+YGG++K K  G+K EGK + D+W L+M   I   +PTW+++ +KG  PS RSGA M V+KNRALLFGGV D EG +H ++
Sbjct:   33 SKEAKDAGEEDIEAILQEFMKKDAAKVAIAV-VPSLQPSPRANFSLSSMVNGDLLMFGGEYFDGECNVCYNELYRWNLEANEWKLISSPNTPPPRCSHQSVVYRDHLYVFGGEFATADQFYHYRDLWRLDLKTNSWECLEGKG-GPSPRSGHRMTVWRNYLVVFGGFYEAARETKWFNDLFLFNFADLKWKKISLPVHKASPAPRSGCQLAVMASNDTIFMYGGYAKVKNVGEKAEGKVYTDIWALHMAPIIKAQDPTWEKLSRKGHAPSPRSGATMAVYKNRALLFGGVFDEEGRRHELK 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5930.13563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC32_ECTSI7.190e-18683.00DUF4110 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CMD6_9STRA6.180e-15069.18DUF4110 domain-containing protein n=1 Tax=Tribonem... [more]
A0A1W0A6K9_9STRA2.990e-13559.80Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A6A5A5E2_9STRA2.900e-13158.80Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A067CA73_SAPPC5.160e-13059.47DUF4110 domain-containing protein n=2 Tax=Saproleg... [more]
A0A6G0WUG0_9STRA2.750e-12959.47DUF4110 domain-containing protein n=2 Tax=Aphanomy... [more]
A0A1V9YDE6_9STRA1.060e-12858.80DUF4110 domain-containing protein n=1 Tax=Achlya h... [more]
A0A024U8N4_9STRA3.610e-12859.14DUF4110 domain-containing protein n=2 Tax=Aphanomy... [more]
W4GXH2_9STRA4.600e-12759.14Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GXS6_9STRA5.120e-12759.14DUF4110 domain-containing protein n=5 Tax=Aphanomy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5930contigH-paniculata_contig5930:764..12378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score541.6
Seed ortholog evalue2.6e-151
Seed eggNOG ortholog2880.D8LC32
Preferred nameKLHDC4
KEGG koko:K20781
KEGG Pathwayko00514,map00514
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.Galactose oxidase, central domain
EggNOG OGsKOG1230@1,KOG1230@2759
Ec32 ortholog descriptionKelch-type beta propeller
Ec32 orthologEc-20_004250.1
COG Functional cat.L
CAZyGT96
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons8
Model size993
Cds size993
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5930.13563.1prot_H-paniculata_contig5930.13563.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5930 764..12378 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930651.0926661-CDS-H-paniculata_contig5930:763..8831622930651.0926661-CDS-H-paniculata_contig5930:763..883Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 764..883 -
1691481389.8043132-CDS-H-paniculata_contig5930:763..8831691481389.8043132-CDS-H-paniculata_contig5930:763..883Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 764..883 -
1622930651.1136286-CDS-H-paniculata_contig5930:2730..28321622930651.1136286-CDS-H-paniculata_contig5930:2730..2832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 2731..2832 -
1691481389.8158028-CDS-H-paniculata_contig5930:2730..28321691481389.8158028-CDS-H-paniculata_contig5930:2730..2832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 2731..2832 -
1622930651.1330993-CDS-H-paniculata_contig5930:5819..59341622930651.1330993-CDS-H-paniculata_contig5930:5819..5934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 5820..5934 -
1691481389.8248942-CDS-H-paniculata_contig5930:5819..59341691481389.8248942-CDS-H-paniculata_contig5930:5819..5934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 5820..5934 -
1622930651.1519942-CDS-H-paniculata_contig5930:6859..70291622930651.1519942-CDS-H-paniculata_contig5930:6859..7029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 6860..7029 -
1691481389.8394315-CDS-H-paniculata_contig5930:6859..70291691481389.8394315-CDS-H-paniculata_contig5930:6859..7029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 6860..7029 -
1622930651.1754253-CDS-H-paniculata_contig5930:7549..77211622930651.1754253-CDS-H-paniculata_contig5930:7549..7721Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 7550..7721 -
1691481389.8541183-CDS-H-paniculata_contig5930:7549..77211691481389.8541183-CDS-H-paniculata_contig5930:7549..7721Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 7550..7721 -
1622930651.2010436-CDS-H-paniculata_contig5930:8179..83191622930651.2010436-CDS-H-paniculata_contig5930:8179..8319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 8180..8319 -
1691481389.8657246-CDS-H-paniculata_contig5930:8179..83191691481389.8657246-CDS-H-paniculata_contig5930:8179..8319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 8180..8319 -
1622930651.2232556-CDS-H-paniculata_contig5930:9832..99101622930651.2232556-CDS-H-paniculata_contig5930:9832..9910Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 9833..9910 -
1691481389.87694-CDS-H-paniculata_contig5930:9832..99101691481389.87694-CDS-H-paniculata_contig5930:9832..9910Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 9833..9910 -
1622930651.241877-CDS-H-paniculata_contig5930:12282..123781622930651.241877-CDS-H-paniculata_contig5930:12282..12378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 12283..12378 -
1691481389.8909435-CDS-H-paniculata_contig5930:12282..123781691481389.8909435-CDS-H-paniculata_contig5930:12282..12378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5930 12283..12378 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5930.13563.1

>prot_H-paniculata_contig5930.13563.1 ID=prot_H-paniculata_contig5930.13563.1|Name=mRNA_H-paniculata_contig5930.13563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp
MAKKKGAVAKAVAKQEAKDQKKKRQEQKATSKDAREASEDNIEAILAEIL
KKEEQKTAVTVTVCESPPSPRANFTVTSLPNGDMVLFGGEYFDGLDTKCF
NELFRWNVEKNEWRQIESPNTPPPRCSHQAAFFRNHLYVLGGEFATTEQF
YHYKDFWRLDIKTNAWEKLGMNGKAPSARSGHRMVVWRNQLVLFGGFYEA
FRDTKWFNDLYMMNFQDLSWRQVDTPVTTTIPAPRSGHQMAVHGGGDQIF
LYGGWSKEKEPGQKKEGKTHNDMWVLNMKAAISGGNPTWDRMGKKGAPPS
IRSGAAMTVHKNRALLFGGVLDHEGPQHAVR
back to top

mRNA from alignment at H-paniculata_contig5930:764..12378-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5930.13563.1 ID=mRNA_H-paniculata_contig5930.13563.1|Name=mRNA_H-paniculata_contig5930.13563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11615bp|location=Sequence derived from alignment at H-paniculata_contig5930:764..12378- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAAAGAAGAAGGGCGCTGTAGCCAAGGCGGTGGCTAAACAGGAAGC
GAAGGATCAGAAGAAGAAAAGGCAGGAGCAAAAGGCTACTAGCAAGGTTG
CTAAGAGGATCAGCAAGAAGGCAAGCTGAGCGTGCATGTCTGCATCACTG
TGCGCTGCTGAGTATCAACGGAAGCGGGAAAAGCGAACTTCGATATGTCA
GGAGTAAATCCTCATCGATACTCGGCCCATCCAGGGACTTCGGTCTTGGC
TTGGCTACTCGAGGGTGTTGAGTAATTTTTGTTTGCCCTTGTTTGTGAGA
ACATGCCGCCCTTGCAGTCTTTGGCTGCTAATAGACTACAGGACTGCCCT
CTGCCACAGCGCTCTGCTTTACTACATTGTTCGGCTGTCGCGTGTCTTGC
TTCTCTCACTTCAATATTATCATCTACTATTCCGTACTCCGATATGTGCC
ATCTAGAGCTTGACATTCAGTGAAGATCCAATGGCTTGAGCATTCGATTT
AATGTATACAGCAGTTGTAGTTAGGGCGTTGTGAATCGATGGGATTTACC
TAAACCAGGACACAAAGAGTACATTGGCATACAGCAGAATTTTACTCAGT
TGGGTGCAGCACCCGCCAAAATGACGCTGTAGCAACCGTCGGAACTTAGA
GAGTGTCTCTTCTTGTGTGATGAGGTCCTCTGTCCAATATATTACAGGTA
TATTGCACTGTGTAGGGTAGTGCTGTACTGAACGATTGGCTGGGGATACG
ACGCCGCCCCCTTGACGGTACCCAGTATAGTTTACACTACAGTAGAGCGG
TGCAATACTGAATGATGATGGGCAATGTCTTACGGGGTTGGATTTTTCCA
GTCGAAATTTCTCTACTTTCCGATTTCTCGAAGGGTGCAAAAATCTGATA
TTCAATATTCGACTCGCGTTTGTCATGGGGTTGGATTTCCTGAAGGTGGT
TTTTTGTGGAGGTTTGCCGGCGTTGTGGTACAAGCGGCATAATTCAAAAT
TCAAACACACCCTCCAACGTTGTGTCCTCGAGCACACCACCCAAGATATC
ACCCTCGTACACGAACCCTCCAGCACACACCCCGGCACACACTCGCATCA
CCATTCAAAGATTGCACGATCATGAGTGTACCGTCAACTGTGATGCATCT
TATGATTAATCCATGCGTGGAATGGATGTGAAGTGAGATGAAGGCTCAGG
GGATCAAATTGGCTGCCAGCAAGGCACAGGGAATAGTGTACCACTGTGTT
ACGCGTGTACTGGTGTGAAGCAGAACGGTGGGACAATGTCTCAGGCCAAC
AGGAACAAGGCCGCGGCTGAATTGTACGATCAGGTCGCCGTTCACAGCTT
CCTCCACTGGGTGGAGGAAACCCCCAAGCTAGTAGTCTCGCAAGTTCTAT
ATTGCTGCGGGGGTCATTGACCTTGGCTTGTCTGTATCCCTCGTGGTTGC
GTATTGCTGCAGTAGGCTGTGACATGTCAAACGTTGGATGAAAAACAACA
TTGACGCCTTCATATGGTGGTACTTGAAGAAATTCCATACGCGAGGATAA
CTCTGATTTCTGCCAGAAATCGGGGAATGGGGCCGGCTGTATCTCCCGTC
TCGGATTCCTCAATTCAGATTTACAAGAATCCAACGGCATAGTATGGAAA
ATCGAATTTCTCGGAGTTGAATAATTCGAAAATCTGTATTCGACTTGAAA
AATCCGACCTCATAAGAGATGGCCTTATAGCGGAACAAGTTGAACTCAAA
ATTCTGTGTGGTAACTCTGAATAAATATCAAACTGTTTATGATATGTGTA
TTACAGCAAAAATTGAATTGAGTCCACTACATGGCAGTTCCGATATACTG
TCACTGCACTGGGCACTTTGTGAAATACTCTTCCGCCGCCCCCGCACCCC
AACTGGTATTTAGTTCAGAGGCAACTGTGTGTTGATGTTTCAACCCCGTT
GTGTTCCTCGAAGTTTATTGGTGGATAACAGTACCTGTATAGGCGGCTGT
GTTTGCAGGCTGCGTGCGACAACCTCTCCGTGATGTATCAGTGTTTGAGC
CCTTTCCCGCTCCTCTGCCCGCTCGCCTCGAAACCATATAATCCGCATAT
GTTGATAATCAGACAGAGAAAGACTAAGACGTTGTCTTATCCAAGAGCCA
AAGATACTAGGATGAAACTGAAAAACGAGTTTGTTTTTTCTTTCGAAGAT
TGTGTTTGTTTTTTCAGTCGTATTAATTTCAACCATGGCACGAACTTTTG
CCCCTGGTCGCGTGTTCGTGGTTACTCTTATAAGACAAGATTGCCGCGCA
TCCCTTCGAGGGCCAACGTGGTCAACATCTATTCCTGACTGTTGGCGTCC
TTCAAGTGCCGACGTGATCGAAAAATATTTTCTGACCTTTGGTGTATGTT
TTCATCGGTTGAAGCTGCGACACCCATCTTCCCCCACTCCCCCTATTTCC
CCGGCGTGTATGTGGCAGGATGCGCGCGAGGCGAGTGAGGACAATATCGA
AGCCATTCTTGCCGAGATCCTCAAGAAGGAAGAGCAAAAGACTGCGGTAT
GATTCGTACCTGTTTGTTATTGAAAGCCATGTAATTAGGTGGTGATGATC
GTTGTTTTGGGGTAGTTTTTCAACCCTCTAACAAAATAACTGCTACAAAC
GAACCTTCATGAGGATTGTGCCTGTATGTACATACGAACATAGCGAGTCA
CTAGGAGCGCAGCGAGCCGTTGTGTGTGGATGTTTGGTTTGGGGTAATGG
CTGAGGGGATACGAGGAAATAATGTAACGCGTGTTGCACAGGCATGGCCG
TGATTGTACTCGAACGTTCATACTCAGTGTTGGTATTTGTGGGGGTGTAC
ATGAATGAATATGGAAAAACATGCCCGACCTAACTTGAATTGTCATCCCC
ACGGTCGGTAGCACGTGTTTCGTTGCATCATTTACGTTAGCTGCGTAGTT
ACCTGTTGTTCGGCGCTTACCGTAGCCCCCCAACCCCCCCTCCCTTATGG
CCATACTCCACCAGGAGTGGATAGGTGGACAATGCTCCCAAGTATATCAT
ACATAAAGCGACGTGATCTCTTTGTGTGGCCTGACGTTGTTTATACGTGC
GCATAACGATCAAAGCCTCGTGCGATACTTGGGGTATAGTAACGCCTGCC
GAATGTACAACGTTTGGTTACCCGGCATACCCAAACCCCGACAGCAGAAT
CAGGTCAGCGTAGCAACGCAAGGATGTGACTAATGGGTTTCATCATCCGT
GCAAAACGTAGCCTGACCGGCAAATATCCGGCGCATGCTCCGTACCGGCA
TTGTAAAGATGCGAGGTCAATGGTCGAGAGACTGCTGCGTGCGTCTTCAT
GGGTGCACCTCCCTTACCCCCTTCCTTACACTTGCAAGTAAGCTCGGTCA
CTGGCGCAACCGCTCTTCAATGTAAAACACGAGTACTTATCCCCCTTCCA
TTATTTTTTTAACGATGCCATCAGCTTGAGGTTTATACACACACTGATTT
AATCCTTTCGGAAGGAGACCTTGCACAGCTAAAGCTAGATTTTTCAATGA
CCGAATCGCGAAGAAATCATGCCGACGTCTTCAGGAATGTTCAACCCGCT
ACGGCCCTCTGGATAGTGTATCTCAGGTCCAAATAAATATTTTTTATTCA
CCGATTGAGCCATTGTTATGTGAATTCAATATGGAGCGAGAATGGGCTAA
CAACGAGCTTGTTTCGTAACGATCGAACGGTAAAAAAGCTATGACGGGAT
CATGGGGCCCTCAAGGATTAACGCGAAATAGTCTTCACACGTTTCAATAT
GTGATCCTACCAGAGCAGTTTTACTCAACATTGTAGCCCCCCCAAAACGT
CTCTTTGCTGTAGGCTTCATCTCTTTCGCTACATCTGTCTTGTCTAGTAG
TGTCGTAAGCTGGTTACCCCCCTATTCCCAGGTTGGGTACCCCCCCTCTG
TGTGCGGTATTTTTCATGGCATTTGGCCTTTATCGCTCTCTCTATCTCTC
TCCGTGTGTCTCGTTTCGCTCGTCGCTGGCTGCGTTCTTGCGCCCTGTCG
CTATTTCAGGTGACGGTCACCGTGTGCGAGTCTCCACCCTCTCCCAGGGC
AAACTTCACGGTCACGTCTCTTCCCAATGGAGACATGGTGCTTTTCGGCG
GAGAGTACTTCGATGGGCTAGACACCAAGTGTTTCAACGAGCTCTTCAGG
TCAGTCAGCTCTCCTTCTGTCGTGCAAGAGGTCTCCGTAGAACTGGTAAC
TGCCCACGTCTCTCCGGTTGGAGAACTAGGCATGCCGTTTGTGCTGAGCA
CGACTACCATGTCGACCTGTTATCGAGATTTCGCCGCTAAGAATAACAAC
GGCTTCGACTGCAAGTGTAACGCGAGCTTTGGAAGTGGTATTTTGGACGT
TCATACGCTTTCGTGGTTGGCGTTCGTACAACAATGCTCTAATTTATGCA
GGAGTCTTCGCGATATTTTTACCGAGTTCATTTACCGCGATATTGCGTGG
TAATGGACTTTTTTCGCCGTGTGCATGACCGGGTCAACAATACTGTGATG
TACCGTTATACTTACAGCGCTTTTCTTCCGCCGCACCTTGTGGTTGTCGT
CCAAGAATTGATACCATGAAGGCCCCTGACGTTATGTCTCGCCTTGTTTC
CCGAAAGGTGGAACGTGGAGAAAAACGAGTGGAGGCAGATCGAGTCTCCA
AACACGCCTCCCCCGAGGTGTTCCCACCAAGCGGCGTTTTTCCGAAACCA
CCTCTACGTGCTCGGCGGCGAGTTTGCTACGACGGAGCAGTTCTATCACT
ACAAAGACTTTTGGCGCTTGGACATCAAGGTGGATATTCACCTGCTGTAC
CATGCATGGGAAAACGCGCGGAGCTCTCGAACTTTTCTTGGTTTTGCACA
GATGCGCTCAGTGGCTGCCGTGACACGTGTATACCAACACTCGGTAGATC
TTCGTATATCGACCGGATTTGCACCCATGGGCAAGAAAGTCAACAGGTCA
TAATCTCAAATATCGCGCCCAATACTCGAAGCACCATGGAGAGTGCGACC
GACTACTCGTCAAGATGCGGTGTGTCGCTCGTCACAGAGATAGCATGTTG
GGTGTGGGTCGTGCCACGAACGTTCGACTAACTCCCCCAGTGTCCATGCG
AACAACGAAACACCCTCTCGACGATGCACTGCTGGGTCTTGGATATTCGT
GCGTCTCCGCCCGTACGTAACTCGAGCAAGTACGGGGCGAGCACTAATCT
TGAAAAAATGTTGCTGTTGCTGTTGGTACTGTTTCTGTTTTTTTTTTGTC
GTTCTCGGAACAATGTGTCCATCTCAACTTGAACAAAAAAACGAGGTAGA
CCAACGCCTGGGAGAAGCTGGGGATGAACGGGAAGGCTCCATCTGCACGC
AGTGGACACCGCATGGTTGTGTGGCGGAACCAACTGGTCCTATTCGGGGG
TTTCTACGAGGCATTTCGAGACACCAAGTGGTTCAACGACCTCTACATGA
TGAACTTTCAGGACCTAAGGTGAGCATTCTAGTTGTGCCCCGTTCGATAG
GTGCTGGTAAAAGCAATTGAAGCATAATAAGGGAGAGCTTCGTACCTATT
TGTTGTACCTAAGGCGGGTTCTCCAACTCAGCGTATGAGGTCCCAGCTCA
TGAGGTGTTTTCGTGACATCGAGTGTGGTTCAACTACTGCATCGCCGGCT
GGTTCGTTTTGAGGCAGTAGAAGTGTGTTTTGGTGTTTTCAGTGGACGGA
CGATGGGAAAGGCATACGGTCACACTTTTTGTCCTTGACTAAAGTGCAGT
CCGACTTAGCCCTATTTTGTCTTGAGAATCAATCGTGGGCCAACAGAAGT
GAAGCGTAAACAAAGTCCTCGTGTTTTTCCCTATGCAATTACAAGAATGT
GTCGCATACCAGTATATTTGTCATTCTCTAGCCTATATCGTCAATTCGAG
CTTATGCCGTCATGGATTTCGAGCCCCTTCCCACGGTATGGTTGCTGGTC
CAACAAATACTTGAAACTCACAACAGAATTGCTGCCAAAACGAGAAGAAT
GCCCGTCATGTTCCAGAGCATGTCGCCGTCAATTCCAACGTTGATGAGAG
TGTGGGACCACTGCTTACACGGTGCGACAATGTAATACCCTTAATTCCCG
AGGCATCGCACTTCCAACTTCGGACCGCGCGTCCCGATTAATTGAAAGAA
CTACAGCGTTGAAGAAGACAATACGCAGACCCTTCAACGTAACACCCTCG
GGCTTCACTCACGCTCTAGCGAATTCAGTATGTGTTGTATGTTGCGGTTC
ACCGCGCGACACGTGTGTGTAGGGGAACACCCCTTCGATTTCTTTTAGGG
AGGAACGAAACTGACACCTGCGTGTCTGAAATCGAGAGCGACCTATCATG
TTGTTTGCCTATTACTGACCGAACTAAGCGCATCTTGTCTGCAGTTGGCG
ACAGGTAGATACTCCTGTAACCACGACAATACCGGCACCAAGAAGTGGAC
ACCAAATGGCGGTGCATGGAGGGGGGGATCAGATATTCCTCTATGGGGGA
TGGTCCAAGGTACGGAACGCGGTGTACTTAAGAGCTCGCACAGAAAGAAA
AGTAGACGTAGGGAGAATCGAACTCCGAGCATAATTCTGGAAGGGATATA
TGTTCCCATAAAAAAAAAGTACACGTACGGAGAATCGAACTCCGAGCATA
ACCTTGGAAGGGTCATATGTTACCATTACACCACACGTGTTGGACGTGCA
TGGGTACGTAGCGGTCGTCGAATGTAGACGTTGGATTTTTGTCACGGAGG
GAACATATTAGAGTTTATCTGAGATGCTCATGACGCAGGTAGTTCGGTAC
CAGCTCCGGGAAAAACCGCTTCGTGATTGAGGAATATTGTGTCAAATCCC
GGTTTTCCGTTGCCGTACCGTAGCGTACCCTACAACCTTGTAACCGACTC
GTGACCGACTCCTTCCGTAAACCGCCAAAAACCGCACCATGCAAGTACCA
TAGCATTTCCAAACTGTAACTCGGTGTATCTAGATAAGAAGAGGTAAGGG
GGGGTGGTGGTGGTCGAAATCAACGCATGTGTAAAATATCTCGACATGAA
AAAGATGTAGCAGGAAAATTAATTCATTGCTGTAAGTTAATGCGCCATCG
TGATGGTGATGTTCACAAAGGGGCCTGAATTCCGTATGCGAATGGCATAA
CCGCGACCTGCCCACAGGTGGCGAATGAGGGTCTCTGAATTTCCCACACC
ACTGACGTAACTGTGCAGTTGAGTTTTACTATTTTTTTCGGGAAAATGGT
TGAGGTATACAAATTGAGCATACTGTGATGGTAGGTGACGTCACGCCGCG
AAGGGCCCACAACGTCGGCCTAAATCTGTTGTGTTCGCCAACGTTGCCAA
GGGCGCTAAGTTGAGCTTGTTACATGGGGTACATTTGTTGGCATGTTTTG
ATGTTGTATATTCATATTAATTACACTAAATTTGAACGCTCTTCATCGTA
ACACACGTGAAACATTTTTGTCCCACTGCCGAATATGATGTATGCTAATA
ATACAGTAACAATGCAGTCAGGTGTCCTCTATTCTAAGGCGACATATGGA
CAGATGCCGACGGATCTCTTTTTTGAGTCATGTGCGTTATTGAGGATGAC
ACATAACAAAGCAATAGTCCTTAGTGAAGAATTACCATGAGAAACTATAT
TATGTTGTCAACCACGAAGGACAAGCAATGGTACGAGTGACGATCATTGC
CTTTGCATGAAGATCTCGCTAAAAAAGAACACATTGACCTTGTGATTTTT
TCTGTTGTTGTTTTGTCATCCCCAAAGTGCAAGCGCAAAATGTGTTGGCA
CGTGAAAGGCACTCGCCGCGTAAAATTGCACTGTACTGTACTTATTGAGC
TCCTGTCTGCGCTGGACAGTATAGGATGATGCGCGTTATTTATCTATCTA
CATATGTATTCTCGTCTGGATGGCTTGGGACGTAACCAAGCAGTTGTATG
TATTTTATGTGTACTTTTGAAGAAATCACAAATAATACCATTGGGTTAAC
GTCTGTCTGATAAACAAGACTATCAGAATTGCCACTTGACCTTCGAGTAT
TGTACCTTGTGGTATGGGTTGTGGCTGGGGATAAAATCCACTTATTCGGG
AGGCGTGCAGCCCCAAGAAGCGGACTGCCCGGGTCTATGTATCCGGGGCT
AACTTTGGCCTTACACGATATCCGCCCATATCCCATGGTCTAATTGCATG
TGAAAATAATATTTCATGTTTAACGAATGCGTACACATAATTTAGCAACA
GTATAGTAGATAAAATTTCGACACCCTAATACGCACGTAACACGTGTGGT
GTAATGGTAACATATGACCCTTCCAAGGTTATGCTCGGAGTTCGATTCTC
CGTACGTGTAATTTTTTTGTTGTAATACACAATCGTATTATACAGGGCAT
TCCGTAGGTCCGGTATTGAAAAACGACGAGACGTGATTAGTATTTCGTTT
TCGGGGTACAGTAGGATGCCCTCTATAAAGCGACCCTCTATAAGGTAAAG
TGGTAGACGAGGCGATGGACAGGTCGTTAGTCAAGCATGAATAAGGTACA
TGACCTTATTAAAGCAACCATCAGTTTTTGAGGCGAGCGAAGTAATTCGT
TCCTTCTACTCCAAATTAAACTGTAGGGGTTGGTCCACTCTCGCGCGAGC
TGGGCACTTTAGCGATAACAGACGAGAGCACACAGGCGGTAAAAAACAGA
AAGCGTAATTTATCAGCTCTGAACGACTGAAAATTGTTCCGAAAAAAGAT
ACCAATGACCACACGCACATGTACTTGCGGCAAATGACCCACGACTCGCT
TCGCCACTTTTTTTTTTTTTTTTGTGAAGTGGTCGTACAAGTCAAAAGGG
TCGATGTAGCAAAGATTTAGCAAAAGGTAACAACAGCCCCTTCACAAAGA
TTGTTTTTTTTTGTTTTCACGTTAGCCTTCGGGCAAGTGTTGAAAAATCA
GGGGGGAAATGGGTTCCGAGACTCGAAAGAGCAGATTGCCCCTTTCTTGA
TAGTTACGACGGCTGTCTAAAGTCCAAAGCGGGATGTAATGCGAAGTTTT
TTTATTTTGCCATTGAGGACAAATGCGCACATTGTCAAGCTGTAAATTGT
GAAGTCCATCTCTCCAAAGTGCTTAAAACTAAAACAGGAGGATTGAGTAG
GCCATAAGAAATGACTTAACAGTACCCGCATCTATGGGTACTCCTTCGGG
TCCGATCGTTTGCTTTTTTGTTTCCCTTGGTTTTCCTGTCGAAGTCACAA
TTCGGCGAGAATCTCGTCGACACTCCATCCTATCGCCATCCCTCCACTAT
CTGAATATCGATCGGCTCCTTTGAGGAGAGCATGATGTTCGTATTTACCC
TGTCAAAAACATGTACCGCGGTATAAAGCCACAGGTAGTATCTCTCACCG
AGCCAAGGTCCGACAAAAAGAAACGATCCTTTTTGAGATTTCATATTGCC
CCTAAGTATTCAAGCAATGCCACTTTTCTTTCAATTTTGAAATCAGGAAA
AGGAGCCCGGGCAAAAGAAGGAGGGCAAGACGCACAACGATATGTGGGTG
TTGAACATGAAGGCTGCTATCTCCGGCGGCAATCCCACGTGGGACAGGGT
GAGCGAGGGTAGGTTCTGTCAGTTTTCGGCTCTGGTGTCGAGACTCCGAG
AACATTGGCACCAAATGTTTGTCATCTCTAACGTGCTACCTCATTTGAGA
CCTTGTTGCAAGAGCAATCGTATATACTAGTAGCAGTCATTGTCATGTGA
AAGAAAAATAAAGCTTTTACCCCAGGGTGGGGTTTCCCTACTCTAGTATC
TCAGACCCGCAGTCGTAGGACAGAAATTCTTAAGGGTAAAACCAGAAATC
TCACCAAAACATCCGACACACTCCACACATCTGGGAGCAGGCGTACGAAT
CCCGCAGGTAGCAACCGCACGGTAGACCCCCTGTTCCAAAATTTAAGGGA
ACCAACTGTATTCGGACAGGAGCACCCGATTCCGTTTATTTTCGTCGCTG
ATCAGTTCATCGGAACCCCCGATCCGAAGCGTGGAGAGTAATGCTTCGGT
TCTTGCCTTCGATTATCGCGCGGTGGGGGCAGGAGCAGTCTCACTCGTTC
AAGTGAGAGTTGACAGTGGTATACTCTTCAGAATAGTCTTCTCCCTTCCG
CAGTGCATGTAAATGATGACCCTGAATGGATTATGACCAATTCGCGTGGT
AGGGGTTAAGCGAAGATCAGTGCGTACTGATTCTGGAGTAAAAAAGAACT
GTCGCTACTTTACGAATTACCCTCAAGAGTGTTGTCCCCTTGTAAAATTA
CACACGTGGGATGGCTATGACGACTAACAGTTGTGGTAATCGTAGTCGCT
ATGCGTTTTTTTAAGTCGATTGATGGTTAAGTCCGTTTTTGGAATTCAGT
CACACCAGTCGACTAGCAACGACTAATTAACCGCTGGACGTGTCTAAAAT
TGGGTGGATTTCCCCCGTAATTCCCATATTCTATTTGCGACGTTCTTTGT
CTTCCGTCGACAACCGAAACCTCGTAACGATCAAACCATAGATTTCCAAT
CGACTCGTCGTGAATAGCGATGAATACATTCAAATTATGCTACGGAGCTC
TCGATGGCTTGTTAACTCCTTTCCAACATCTGACCTCCTAGTGGAGCGGT
AGAGTGCTTGCTTATTATTTGATCGTTTCAAAAAAAGCTGGAGTTTACCC
GTTGTTCCTCTCACCTAAATCCAAGATAAAAGCCCCCCAAACGGCGAACC
TGAGATGCATCAATCAGTTTTGTACACCTGGTCAAGATATTCTGTCGACG
TATTCGTCATCATTTACAACTGGTCGTTGGCAAATCCACCCTTCAGTCGT
TACGAAATGTCTGGTTCCTCCAGGTGAACAGTGGGTATCTGGTACAAGGT
GAAGCCGTTCTTTCGCTGAATCAGGCAGTAGGATGAAAGTGCTCATGCTA
AATATCCAGCGGGAAAATAGGTGAAATTTTTCGTTGCGAACGCTCTCCAG
TACTCGTGTTTGTCCGACCGGTGATTGCTGTATATGCGTGTTGATGCATG
ACAGCGCACTTCCAGCGATAATTCCTATCTAAAGTGAAAATTCGATGCTC
TCAGGAGAGGTTCTCGAGGGGACACCTTCTGCGCTGCAGGTTATCCTAAT
TCTTGGGATGTAGAGCAGAGCATATGAATGTGGATATTGTTTTGTCACTG
ATGAATCAACTGGTCATCATCCAGGGTCGAAAGAGTTAGAAGAGGTATTC
CGAGAAAGAGAGACAACAATGCCGTTGGTTGTTGTGTAGGGGACCTGGGG
TTCAGGAACACCAGGAACGTTCCTGCTCTCAACAACAAGAATGATGAAAA
CGGCCTTGCTTCATATTGCTCTAATCCGCATCCTGTTGCCTCATGTTTTT
TCCCGTTCCTCGTCCTTGCCGTGGCATGGGGCTACTTGGAAACAGATGGG
GAAAAAGGGAGCGCCTCCGTCGATCCGCTCGGGCGCGGCCATGACCGTCC
ACAAGAACCGAGCGTTGCTGTTCGGCGGAGTGTTGGATCACGAGGGGCCA
CAGCACGCTGTCAGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5930:764..12378-

>mRNA_H-paniculata_contig5930.13563.1 ID=mRNA_H-paniculata_contig5930.13563.1|Name=mRNA_H-paniculata_contig5930.13563.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig5930:764..12378- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAAAGAAGAAGGGCGCTGTAGCCAAGGCGGTGGCTAAACAGGAAGC
GAAGGATCAGAAGAAGAAAAGGCAGGAGCAAAAGGCTACTAGCAAGATGG
CAAAGAAGAAGGGCGCTGTAGCCAAGGCGGTGGCTAAACAGGAAGCGAAG
GATCAGAAGAAGAAAAGGCAGGAGCAAAAGGCTACTAGCAAGGATGCGCG
CGAGGCGAGTGAGGACAATATCGAAGCCATTCTTGCCGAGATCCTCAAGA
AGGAAGAGCAAAAGACTGCGGATGCGCGCGAGGCGAGTGAGGACAATATC
GAAGCCATTCTTGCCGAGATCCTCAAGAAGGAAGAGCAAAAGACTGCGGT
GACGGTCACCGTGTGCGAGTCTCCACCCTCTCCCAGGGCAAACTTCACGG
TCACGTCTCTTCCCAATGGAGACATGGTGCTTTTCGGCGGAGAGTACTTC
GATGGGCTAGACACCAAGTGTTTCAACGAGCTCTTCAGGTGACGGTCACC
GTGTGCGAGTCTCCACCCTCTCCCAGGGCAAACTTCACGGTCACGTCTCT
TCCCAATGGAGACATGGTGCTTTTCGGCGGAGAGTACTTCGATGGGCTAG
ACACCAAGTGTTTCAACGAGCTCTTCAGGTGGAACGTGGAGAAAAACGAG
TGGAGGCAGATCGAGTCTCCAAACACGCCTCCCCCGAGGTGTTCCCACCA
AGCGGCGTTTTTCCGAAACCACCTCTACGTGCTCGGCGGCGAGTTTGCTA
CGACGGAGCAGTTCTATCACTACAAAGACTTTTGGCGCTTGGACATCAAG
GTGGAACGTGGAGAAAAACGAGTGGAGGCAGATCGAGTCTCCAAACACGC
CTCCCCCGAGGTGTTCCCACCAAGCGGCGTTTTTCCGAAACCACCTCTAC
GTGCTCGGCGGCGAGTTTGCTACGACGGAGCAGTTCTATCACTACAAAGA
CTTTTGGCGCTTGGACATCAAGACCAACGCCTGGGAGAAGCTGGGGATGA
ACGGGAAGGCTCCATCTGCACGCAGTGGACACCGCATGGTTGTGTGGCGG
AACCAACTGGTCCTATTCGGGGGTTTCTACGAGGCATTTCGAGACACCAA
GTGGTTCAACGACCTCTACATGATGAACTTTCAGGACCTAAGACCAACGC
CTGGGAGAAGCTGGGGATGAACGGGAAGGCTCCATCTGCACGCAGTGGAC
ACCGCATGGTTGTGTGGCGGAACCAACTGGTCCTATTCGGGGGTTTCTAC
GAGGCATTTCGAGACACCAAGTGGTTCAACGACCTCTACATGATGAACTT
TCAGGACCTAAGTTGGCGACAGGTAGATACTCCTGTAACCACGACAATAC
CGGCACCAAGAAGTGGACACCAAATGGCGGTGCATGGAGGGGGGGATCAG
ATATTCCTCTATGGGGGATGGTCCAAGTTGGCGACAGGTAGATACTCCTG
TAACCACGACAATACCGGCACCAAGAAGTGGACACCAAATGGCGGTGCAT
GGAGGGGGGGATCAGATATTCCTCTATGGGGGATGGTCCAAGGAAAAGGA
GCCCGGGCAAAAGAAGGAGGGCAAGACGCACAACGATATGTGGGTGTTGA
ACATGAAGGCTGCTATCTCCGGCGGCAATCCCACGTGGGACAGGGAAAAG
GAGCCCGGGCAAAAGAAGGAGGGCAAGACGCACAACGATATGTGGGTGTT
GAACATGAAGGCTGCTATCTCCGGCGGCAATCCCACGTGGGACAGGATGG
GGAAAAAGGGAGCGCCTCCGTCGATCCGCTCGGGCGCGGCCATGACCGTC
CACAAGAACCGAGCGTTGCTGTTCGGCGGAGTGTTGGATCACGAGGGGCC
ACAGCACGCTGTCAGGATGGGGAAAAAGGGAGCGCCTCCGTCGATCCGCT
CGGGCGCGGCCATGACCGTCCACAAGAACCGAGCGTTGCTGTTCGGCGGA
GTGTTGGATCACGAGGGGCCACAGCACGCTGTCAGG
back to top