mRNA_H-paniculata_contig593.13562.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig593.13562.1
Unique NamemRNA_H-paniculata_contig593.13562.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: D7FQE8_ECTSI (Adenylate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE8_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 4.420e-22
Identity = 43/56 (76.79%), Postives = 52/56 (92.86%), Query Frame = 1
Query:    4 QADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            QADAL A GIQA+SFLLLNVPDE+LI RVVGRRLDP+TGDIYH+++NPPPA+++ R
Sbjct:  211 QADALAAEGIQANSFLLLNVPDEMLIRRVVGRRLDPDTGDIYHVDFNPPPAEIVDR 266          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A8JDN2_CHLRE (Adenylate kinase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8JDN2_CHLRE)

HSP 1 Score: 89.7 bits (221), Expect = 2.040e-20
Identity = 39/57 (68.42%), Postives = 51/57 (89.47%), Query Frame = 1
Query:    1 TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            +QA+A+E  GI+ D FLL+NVPDE+L+ RVVGRRLDP+TG IYHL+Y+PPPAD++SR
Sbjct:  126 SQAEAIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPADIVSR 182          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A0G4I6Y0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I6Y0_9ALVE)

HSP 1 Score: 88.2 bits (217), Expect = 5.630e-20
Identity = 39/53 (73.58%), Postives = 47/53 (88.68%), Query Frame = 1
Query:    4 QADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADV 162
            QADALEAAGI+ D F++LNVPD+VL+ RVVGRR DPETG IYH+++NPPP DV
Sbjct:  132 QADALEAAGIRPDKFVILNVPDDVLVERVVGRRTDPETGKIYHMKFNPPPEDV 184          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A7S0SIJ2_9CHLO (Adenylate kinase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SIJ2_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 9.260e-20
Identity = 40/57 (70.18%), Postives = 49/57 (85.96%), Query Frame = 1
Query:    1 TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            +QADA+ A GI+ D FLLLNVPDE+LI RVVGRRLDPETG IYH+++ PPPAD++ R
Sbjct:  140 SQADAIAAEGIEPDVFLLLNVPDEMLIERVVGRRLDPETGAIYHVKFFPPPADIVDR 196          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A835XZ95_9CHLO (Adenylate kinase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZ95_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 2.270e-19
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 1
Query:    1 TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            +QA+A+E   I+ D FLL+NVPDE+L+ RV GRRLDP+TG IYHL+YNPPPAD +SR
Sbjct:   89 SQAEAIEKESIRPDLFLLINVPDELLVERVSGRRLDPQTGKIYHLKYNPPPADAVSR 145          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A7S1XXP2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXP2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.750e-19
Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = 1
Query:    4 QADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMS 168
            QADAL  AGI AD+FLLLNVPD+ LI RVVGRRLDPETGDIYH++Y+PPP + ++
Sbjct:  165 QADALAEAGIVADTFLLLNVPDDELIERVVGRRLDPETGDIYHMKYSPPPTEEIA 219          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A150GJ04_GONPE (Adenylate kinase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GJ04_GONPE)

HSP 1 Score: 88.6 bits (218), Expect = 3.280e-19
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 1
Query:    1 TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            +QA+A+E  GI+ D FLL+ VPDE+LI RVVGRRLDP TG IYHL+YNPPPADV+SR
Sbjct:  127 SQAEAIEKEGIRPDVFLLIQVPDELLIERVVGRRLDPVTGAIYHLKYNPPPADVVSR 183          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A061QXW6_9CHLO (Adenylate kinase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QXW6_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 7.560e-19
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 1
Query:    1 TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            +QA+AL+ AGI+AD FLLL VPDE+LI RVVGRRLDPETG IYH+ Y PPP +V  R
Sbjct:  169 SQAEALKEAGIEADVFLLLEVPDEILIERVVGRRLDPETGKIYHMTYFPPPEEVKDR 225          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: C1MPL8_MICPC (Adenylate kinase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MPL8_MICPC)

HSP 1 Score: 85.5 bits (210), Expect = 8.590e-19
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 1
Query:    1 TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            +QADA+E  GI  D FLLLNVPDE+LI RVVGRRLDPETG IYH+++ PPP DV+ R
Sbjct:  152 SQADAIEKEGITPDVFLLLNVPDEMLIERVVGRRLDPETGAIYHVKFFPPPEDVVDR 208          
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Match: A0A2P6TDE0_CHLSO (Adenylate kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TDE0_CHLSO)

HSP 1 Score: 83.6 bits (205), Expect = 1.660e-18
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1
Query:    4 QADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPPPADVMSR 171
            QA+A+E  GI+ D FLL+NVPDE+LI RVVGRR DPETG+IYHL + PPP +++SR
Sbjct:   90 QAEAIEKEGIRPDVFLLINVPDELLIDRVVGRRSDPETGEIYHLTFKPPPPEIVSR 145          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig593.13562.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQE8_ECTSI4.420e-2276.79Adenylate kinase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A8JDN2_CHLRE2.040e-2068.42Adenylate kinase n=3 Tax=Chlamydomonas TaxID=3052 ... [more]
A0A0G4I6Y0_9ALVE5.630e-2073.58Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0SIJ2_9CHLO9.260e-2070.18Adenylate kinase n=1 Tax=Mantoniella antarctica Ta... [more]
A0A835XZ95_9CHLO2.270e-1966.67Adenylate kinase n=1 Tax=Edaphochlamys debaryana T... [more]
A0A7S1XXP2_9STRA2.750e-1972.73Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A150GJ04_GONPE3.280e-1971.93Adenylate kinase n=1 Tax=Gonium pectorale TaxID=33... [more]
A0A061QXW6_9CHLO7.560e-1970.18Adenylate kinase n=1 Tax=Tetraselmis sp. GSL018 Ta... [more]
C1MPL8_MICPC8.590e-1970.18Adenylate kinase n=1 Tax=Micromonas pusilla (strai... [more]
A0A2P6TDE0_CHLSO1.660e-1866.07Adenylate kinase n=1 Tax=Chlorella sorokiniana Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig593contigH-paniculata_contig593:33514..33687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.1
Seed ortholog evalue3e-18
Seed eggNOG ortholog2880.D7FQE8
KEGG rclassRC00002
KEGG koko:K00939
KEGG ReactionR00127,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130
KEGG ModuleM00049
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
EC2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size174
Cds size174
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930651.0325832-CDS-H-paniculata_contig593:33513..336871622930651.0325832-CDS-H-paniculata_contig593:33513..33687Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig593 33514..33687 -
1691481389.7871318-CDS-H-paniculata_contig593:33513..336871691481389.7871318-CDS-H-paniculata_contig593:33513..33687Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig593 33514..33687 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig593.13562.1prot_H-paniculata_contig593.13562.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig593 33514..33687 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig593.13562.1

>prot_H-paniculata_contig593.13562.1 ID=prot_H-paniculata_contig593.13562.1|Name=mRNA_H-paniculata_contig593.13562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
TQADALEAAGIQADSFLLLNVPDEVLIARVVGRRLDPETGDIYHLEYNPP
PADVMSR*
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mRNA from alignment at H-paniculata_contig593:33514..33687-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig593.13562.1 ID=mRNA_H-paniculata_contig593.13562.1|Name=mRNA_H-paniculata_contig593.13562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=174bp|location=Sequence derived from alignment at H-paniculata_contig593:33514..33687- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCAGGCTGATGCCCTGGAGGCAGCAGGTATCCAGGCGGACTCGTTCTT GCTCCTTAACGTGCCCGATGAGGTGTTGATCGCTCGGGTTGTTGGTCGTC GCCTGGATCCCGAAACTGGGGACATCTACCACCTTGAGTACAACCCACCT CCGGCGGACGTCATGTCCAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig593:33514..33687-

>mRNA_H-paniculata_contig593.13562.1 ID=mRNA_H-paniculata_contig593.13562.1|Name=mRNA_H-paniculata_contig593.13562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at H-paniculata_contig593:33514..33687- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCAGGCTGATGCCCTGGAGGCAGCAGGTATCCAGGCGGACTCGTTCTT
GCTCCTTAACGTGCCCGATGAGGTGTTGATCGCTCGGGTTGTTGGTCGTC
GCCTGGATCCCGAAACTGGGGACATCTACCACCTTGAGTACAACCCACCT
CCGGCGGACGTCATGTCCAGGTGAACCCAGGCTGATGCCCTGGAGGCAGC
AGGTATCCAGGCGGACTCGTTCTTGCTCCTTAACGTGCCCGATGAGGTGT
TGATCGCTCGGGTTGTTGGTCGTCGCCTGGATCCCGAAACTGGGGACATC
TACCACCTTGAGTACAACCCACCTCCGGCGGACGTCATGTCCAGGTGA
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