prot_H-paniculata_contig593.13560.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig593.13560.1
Unique Nameprot_H-paniculata_contig593.13560.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length669
Homology
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BLAST of mRNA_H-paniculata_contig593.13560.1 vs. uniprot
Match: A0A6H5JZJ1_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ1_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.830e-51
Identity = 114/202 (56.44%), Postives = 147/202 (72.77%), Query Frame = 0 
Query:   31 SWQVRYL-RLHKSGWQKHKFPHVASIREFPDSSTPHHQFLCITEPSTGRVQERVEL--GSDGGALQSAAFVAAADGQSIIRFALKGPPVKKFAIIADCGRSAAKLCRALHRRGVNVQGMDNLPDSLFLGGNDPRTVDALKANIPSLSRPEVQAYVMRLLFEDSFKLFVNDLREMFSHVLTYLP--ESSTTSAHGTTPSTAAG 227
            SW V YL +  K GWQ+HK PHVAS+          +  L +TE +T R+QERV+L  G+  GA++  AFVAAA  Q+I+RF L G PV+KFA+IA+CGRSAA+LC+AL R+GV+V+GM++LPD++FL G D RT  AL+A IP+LSRPEVQAY++RLLF+DSF  FV+DL EMFSHV T+LP   S  TSA     + AAG
Sbjct:   36 SWGVTYLLQSAKRGWQRHKSPHVASLDAV-------NNCLDVTETATSRLQERVDLAEGATVGAIE-VAFVAAAAAQNIVRFTLPGHPVRKFALIAECGRSAAELCQALDRKGVSVRGMEDLPDAVFLRGGDRRTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDLSEMFSHVQTHLPVPTSMRTSASDPPAAAAAG 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig593.13560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZJ1_9PHAE1.830e-5156.44Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 563..603

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig593contigH-paniculata_contig593:2431..10155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig593.13560.1mRNA_H-paniculata_contig593.13560.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig593 751..10813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig593.13560.1 ID=prot_H-paniculata_contig593.13560.1|Name=mRNA_H-paniculata_contig593.13560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=669bp
MLGLQSNPQQRQRGGSTQTGRAESESESECSWQVRYLRLHKSGWQKHKFP
HVASIREFPDSSTPHHQFLCITEPSTGRVQERVELGSDGGALQSAAFVAA
ADGQSIIRFALKGPPVKKFAIIADCGRSAAKLCRALHRRGVNVQGMDNLP
DSLFLGGNDPRTVDALKANIPSLSRPEVQAYVMRLLFEDSFKLFVNDLRE
MFSHVLTYLPESSTTSAHGTTPSTAAGTAAIPQTNGVRMPYPEETQPPPL
PPSLPPPDRSLGLIAPPAHTPTIPVTIGSSGGGGVVGESGDGDGGVLGEP
DHSVTGASIRDGDPRENDGEHGSDDSKRSIHGPADDNTSHDPDGENRNAT
GKSHRGCSNGAPRDGCGNGNSRGGRGGATAGRKNGRGRGYAERGRGSGKG
RGIGGRRARGAGTRGGAKRIAERGRAGVEIETQQASGKRKVAAVHGDGQG
SGRGGRHGERAGDGRISATTLTASKKKKLHGGGEGDTVQMSAVHKRKKSS
SCSVSSVGADGSGRVAASSTSLTAQPTAASENDAGTAVGSAQAMAVMSAS
AAQFTTSGRAVGLSKALKKQWTTVNNHRSAGAFRVGVNTDFAPDYLDVVK
HPIVMHKTFFVSLNPPWDQTCDQPWLYQMFSLFRLLCRERIGRAGVIQHA
AHYGCCASMACRADYSLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf