prot_H-paniculata_contig59269.13555.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59269.13555.1
Unique Nameprot_H-paniculata_contig59269.13555.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
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BLAST of mRNA_H-paniculata_contig59269.13555.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.070e-17
Identity = 44/71 (61.97%), Postives = 50/71 (70.42%), Query Frame = 0 
Query:   26 APLLKGPPQHPKSWRILHYALA----ARLGTSRFETVDTKVQAVFEASFGAMADDPDRQKRCVFLAVLAPG 92
            A  L+GPPQ PKSWR LH AL+     RLGT R   V  +V AV E S GAMADDP +Q+RC+FLAVLAPG
Sbjct:  407 AEALQGPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPG 477
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59269.13555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6W2_ECTSI1.070e-1761.97NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59269contigH-paniculata_contig59269:225..500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59269.13555.1mRNA_H-paniculata_contig59269.13555.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59269 225..500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59269.13555.1 ID=prot_H-paniculata_contig59269.13555.1|Name=mRNA_H-paniculata_contig59269.13555.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MTQTSISSFQVAADCGKLALALNLAAPLLKGPPQHPKSWRILHYALAARL
GTSRFETVDTKVQAVFEASFGAMADDPDRQKRCVFLAVLAPG
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