mRNA_H-paniculata_contig59208.13548.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: D8LDX3_ECTSI (Exocyst subunit Exo70 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX3_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 1.670e-11 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
R Y KYQDVQFSKKHQEQYLKY+P+AID+GI QLFSG
Sbjct: 794 RELYCKYQDVQFSKKHQEQYLKYSPDAIDQGIGQLFSG 831
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A835YN31_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN31_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 3.700e-7 Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
R Y Y+DV FSKKHQ +YLKY PEA+D GI LF G
Sbjct: 707 RKLYDTYKDVPFSKKHQSEYLKYPPEAVDRGIEGLFQG 744
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A3F2RPA3_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPA3_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.780e-6 Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+ FY+KY +QFSKKH +YLKYTP+A+ +++LFSG
Sbjct: 346 KTFYEKYSAIQFSKKHANRYLKYTPQAVQALLKELFSG 383
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: W2QEH6_PHYPN (Exocyst subunit Exo70 family protein n=41 Tax=Phytophthora TaxID=4783 RepID=W2QEH6_PHYPN) HSP 1 Score: 50.4 bits (119), Expect = 4.540e-6 Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+AFY+KY +QFS+KH +YLKYTP+A +++LFSG
Sbjct: 560 KAFYEKYSVIQFSRKHASRYLKYTPQAAQNLLKELFSG 597
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A225WHI1_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WHI1_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 6.220e-6 Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+AFY+KY +QFS+KH +YLKYTP+A +++LFSG
Sbjct: 534 KAFYEKYSVIQFSRKHTSKYLKYTPQAAQALLKELFSG 571
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A6A3FPN4_9STRA (Exocyst subunit Exo70 family protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FPN4_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 8.500e-6 Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+AFY+KY +QFS+KH +YLKYTP+A +++LFSG
Sbjct: 560 KAFYEKYSVIQFSRKHASKYLKYTPQAAQGLLKELFSG 597
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A329RR22_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RR22_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 8.500e-6 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+AFY KY +QFS+KH +YLKYTP A +R+LFSG
Sbjct: 560 KAFYDKYSVIQFSRKHASRYLKYTPPAAQNLLRELFSG 597
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A8J5MFK2_9STRA (Exo70 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MFK2_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 8.530e-6 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+AFY KY +QFS+KH +YLKYTP A +R+LFSG
Sbjct: 339 KAFYDKYSVIQFSRKHASRYLKYTPPAAQNLLRELFSG 376
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Match: A0A0P1AJX7_PLAHL (Exocyst subunit Exo70 family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJX7_PLAHL) HSP 1 Score: 48.9 bits (115), Expect = 1.590e-5 Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 1 RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG 114
+ FY+KY +QFSKKH +YLKYTP+A +++LF+G
Sbjct: 554 KPFYEKYSAIQFSKKHASRYLKYTPQAAQSLLKELFTG 591 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59208.13548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig59208.13548.1 >prot_H-paniculata_contig59208.13548.1 ID=prot_H-paniculata_contig59208.13548.1|Name=mRNA_H-paniculata_contig59208.13548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=39bp RAFYQKYQDVQFSKKHQEQYLKYTPEAIDEGIRQLFSG*back to top mRNA from alignment at H-paniculata_contig59208:713..829- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig59208.13548.1 ID=mRNA_H-paniculata_contig59208.13548.1|Name=mRNA_H-paniculata_contig59208.13548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=117bp|location=Sequence derived from alignment at H-paniculata_contig59208:713..829- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig59208:713..829- >mRNA_H-paniculata_contig59208.13548.1 ID=mRNA_H-paniculata_contig59208.13548.1|Name=mRNA_H-paniculata_contig59208.13548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=234bp|location=Sequence derived from alignment at H-paniculata_contig59208:713..829- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |