prot_H-paniculata_contig592.13546.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig592.13546.1
Unique Nameprot_H-paniculata_contig592.13546.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A8H6GH72_FUSOX (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fusarium oxysporum f. sp. conglutinans TaxID=100902 RepID=A0A8H6GH72_FUSOX)

HSP 1 Score: 115 bits (289), Expect = 2.630e-27
Identity = 80/230 (34.78%), Postives = 113/230 (49.13%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG-----RSRGPKVHNRIRIQTKRWCDTLVLLEATASHVVQYRDRVSCCRRS 222
            +AVYVDDL+IAG  +E++ + K  +S+   M DLGP    LG+ VRRDR N AI  SQ  Y+ +VL+ +   E + V+TP+  +     PD   +   +TK  Y   +GSLMYA  GTR D A+ V   +R + +P  E     KRI RYL    DL + F G      L G+ D+   G     RS    V N +      W        A +S   +Y  +  C + +
Sbjct:   92 IAVYVDDLLIAGPDKEEIRQIKAALSKKFEMTDLGPCQYYLGMSVRRDRRNKAIFLSQRAYVEKVLREFDMWESKPVTTPLSTSKFQPVPDEY-KASETTKLWYAKAIGSLMYAMLGTRPDIAFAVSLCSRYLGNPTNEHVQAVKRIMRYLRGTIDLELVFTGPLRP--LVGYTDSDWAGDHDTRRSTAGYVFN-VGTGAISWSSKRQPTVALSSCEAEYMGQTQCAKEA 317          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A4Q2UZT8_FUSOX (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Fusarium oxysporum TaxID=5507 RepID=A0A4Q2UZT8_FUSOX)

HSP 1 Score: 116 bits (290), Expect = 3.820e-27
Identity = 71/180 (39.44%), Postives = 98/180 (54.44%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            +AVYVDDL+IAG  +E++ + K  +S+   M DLGP    LG+ VRRDR N AI  SQ  Y+ +VL+ +   E + V+TP+  +     PD   +   +TK  Y   +GSLMYA  GTR D A+ V   +R + +P  E     KRI RYL    DL + F G      L G+ D+   G
Sbjct:   44 IAVYVDDLLIAGPDKEEIRQIKAALSKKFEMTDLGPCQYYLGMSVRRDRRNKAIFLSQRAYVEKVLREFDMWESKPVTTPLSTSKFQPVPDEY-KASETTKLWYAKAIGSLMYAMLGTRPDIAFAVSLCSRYLGNPTNEHVQAVKRIMRYLRGTIDLELVFSGPLRP--LVGYTDSDWAG 220          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A409X4K8_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409X4K8_9AGAR)

HSP 1 Score: 117 bits (292), Expect = 2.110e-26
Identity = 65/183 (35.52%), Postives = 105/183 (57.38%), Query Frame = 0
Query:    1 MAVYVDDLVIAGRR-EKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSS---------TKYRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDA 173
            + V+VDD ++ G   EK+ +FK++I++  ++ DLGP + +LGI++ RD T   IS SQ  YI  ++  + FD+ +  + P++ N ++    +R +C +S           YR  VGSLMYAS GTR D  +     A+ M++P    +   K+IFRYL    +L + +GG++    L GFVDA
Sbjct:  573 LVVHVDDCLLTGNSMEKISKFKRDINQKYKITDLGPCTWLLGIKLTRDLTQRTISLSQHAYIESIITRFNFDDLKPCAIPIDPNQQL----SRSQCPTSLADKARMKNVPYREAVGSLMYASMGTRPDITFATSTVAQFMDNPGWVHWEAVKKIFRYLKGTKELELVYGGETRD--LVGFVDA 749          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A8H6GAL8_FUSOX (Uncharacterized protein n=3 Tax=Fusarium oxysporum TaxID=5507 RepID=A0A8H6GAL8_FUSOX)

HSP 1 Score: 116 bits (290), Expect = 3.820e-26
Identity = 71/180 (39.44%), Postives = 98/180 (54.44%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            +AVYVDDL+IAG  +E++ + K  +S+   M DLGP    LG+ VRRDR N AI  SQ  Y+ +VL+ +   E + V+TP+  +     PD   +   +TK  Y   +GSLMYA  GTR D A+ V   +R + +P  E     KRI RYL    DL + F G      L G+ D+   G
Sbjct:  499 IAVYVDDLLIAGPDKEEIRQIKAALSKKFEMTDLGPCQYYLGMSVRRDRRNKAIFLSQRAYVEKVLREFDMWESKPVTTPLSTSKFQPVPDEY-KASETTKLWYAKAIGSLMYAMLGTRPDIAFAVSLCSRYLGNPTNEHVQAVKRIMRYLRGTIDLELVFSGPLRP--LVGYTDSDWAG 675          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A420MDK5_FUSOX (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Fusarium TaxID=5506 RepID=A0A420MDK5_FUSOX)

HSP 1 Score: 116 bits (290), Expect = 3.920e-26
Identity = 71/180 (39.44%), Postives = 98/180 (54.44%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            +AVYVDDL+IAG  +E++ + K  +S+   M DLGP    LG+ VRRDR N AI  SQ  Y+ +VL+ +   E + V+TP+  +     PD   +   +TK  Y   +GSLMYA  GTR D A+ V   +R + +P  E     KRI RYL    DL + F G      L G+ D+   G
Sbjct:  592 IAVYVDDLLIAGPDKEEIRQIKAALSKKFEMTDLGPCQYYLGMSVRRDRRNKAIFLSQRAYVEKVLREFDMWESKPVTTPLRTSKFQPVPDEY-KASETTKLWYAKAIGSLMYAMLGTRPDIAFAVSLCSRYLGNPTNEHVQAVKRIMRYLRGTIDLELVFSGPLRP--LVGYTDSDWAG 768          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A2K0UHG8_GIBNY (Integrase catalytic domain-containing protein n=2 Tax=Fusarium TaxID=5506 RepID=A0A2K0UHG8_GIBNY)

HSP 1 Score: 116 bits (290), Expect = 4.090e-26
Identity = 71/180 (39.44%), Postives = 98/180 (54.44%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            +AVYVDDL+IAG  +E++ + K  +S+   M DLGP    LG+ VRRDR N AI  SQ  Y+ +VL+ +   E + V+TP+  +     PD   +   +TK  Y   +GSLMYA  GTR D A+ V   +R + +P  E     KRI RYL    DL + F G      L G+ D+   G
Sbjct:  833 IAVYVDDLLIAGPDKEEIRQIKAALSKKFEMTDLGPCQYYLGMSVRRDRRNKAIFLSQRAYVEKVLREFDMWESKPVTTPLSTSKFQPVPDEY-KASETTKLWYAKAIGSLMYAMLGTRPDIAFAVSLCSRYLGNPTNEHVQAVKRIMRYLRGTIDLELVFSGPLRP--LVGYTDSDWAG 1009          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD)

HSP 1 Score: 116 bits (290), Expect = 4.190e-26
Identity = 61/180 (33.89%), Postives = 101/180 (56.11%), Query Frame = 0
Query:    1 MAVYVDDLVIAGRRE-KVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            + +YVDD+++A +++ ++ + K  +S    MKD+GP S +LGI+++RDR  D +   Q GYI++VLK +   E + V+TP+  + K+ +  N      + K  Y   VGS+MYA  GTR D AY +   +R M  P    +   K + RYL    DL++ +     G  ++G+ D+  GG
Sbjct: 1031 LLLYVDDMLLAAKQKSEIQKLKDVLSSEFEMKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKVPYLSAVGSVMYAMVGTRPDVAYALGLVSRFMSKPGSIHWEAVKWLLRYLRGSADLNLIYTKGDAGLRVQGYTDSDFGG 1210          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A0F7ZXE1_9HYPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZXE1_9HYPO)

HSP 1 Score: 113 bits (283), Expect = 4.810e-26
Identity = 70/178 (39.33%), Postives = 93/178 (52.25%), Query Frame = 0
Query:    1 MAVYVDDLVIAG-RREKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTKYRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            +AVYVDDL+IAG  + ++ + K  +S+  +M DLGP S  LG+ V RDR N  I  SQ GYI +VLK +G  E +   TP+  +      D        T Y   +GSLMYA  GTR D AY V   +R +  P     +  KRI RYL    DL + + G+     L GF D+   G
Sbjct:   61 IAVYVDDLLIAGPSKGEIQKLKDALSKRFQMTDLGPCSHYLGMTVTRDRRNRTIRLSQKGYIEKVLKDFGMCEAKPQYTPMTTDRIETPVDYEPTDEIKTWYAKAIGSLMYAMLGTRPDIAYAVSYCSRFLAKPTEAHRTAAKRIMRYLKATIDLCLVYEGEIEP--LTGFTDSDWAG 236          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A8H6G7V4_FUSOX (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fusarium oxysporum f. sp. conglutinans TaxID=100902 RepID=A0A8H6G7V4_FUSOX)

HSP 1 Score: 115 bits (289), Expect = 4.840e-26
Identity = 80/230 (34.78%), Postives = 113/230 (49.13%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK--YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG-----RSRGPKVHNRIRIQTKRWCDTLVLLEATASHVVQYRDRVSCCRRS 222
            +AVYVDDL+IAG  +E++ + K  +S+   M DLGP    LG+ VRRDR N AI  SQ  Y+ +VL+ +   E + V+TP+  +     PD   +   +TK  Y   +GSLMYA  GTR D A+ V   +R + +P  E     KRI RYL    DL + F G      L G+ D+   G     RS    V N +      W        A +S   +Y  +  C + +
Sbjct:  377 IAVYVDDLLIAGPDKEEIRQIKAALSKKFEMTDLGPCQYYLGMSVRRDRRNKAIFLSQRAYVEKVLREFDMWESKPVTTPLSTSKFQPVPDEY-KASETTKLWYAKAIGSLMYAMLGTRPDIAFAVSLCSRYLGNPTNEHVQAVKRIMRYLRGTIDLELVFTGPLRP--LVGYTDSDWAGDHDTRRSTAGYVFN-VGTGAISWSSKRQPTVALSSCEAEYMGQTQCAKEA 602          
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Match: A0A0B4HDI7_METMF (Gag-Pol polyprotein (Fragment) n=2 Tax=Metarhizium TaxID=5529 RepID=A0A0B4HDI7_METMF)

HSP 1 Score: 115 bits (289), Expect = 5.680e-26
Identity = 71/178 (39.89%), Postives = 95/178 (53.37%), Query Frame = 0
Query:    1 MAVYVDDLVIAGR-REKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTNDAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTKYRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLSTVPDLSITFGGKSNGHGLEGFVDAQLGG 177
            +AVYVDDL+IAG  +E++ E K  +S   +M DLGP S  LG+ V RDR N  I  SQ GYI +VLK++G  E +   TP++ +      D        T Y   +G+LMYA  GTR D AY V   +R +  P     +  KRI RYL    DL + + G+     L GF D+   G
Sbjct:  995 IAVYVDDLLIAGPLKEEIQELKDALSNRFQMTDLGPCSYYLGMTVVRDRKNRIIRLSQKGYIEQVLKNFGMCEAKPQYTPMKTDQIETPEDYEPTDEIKTWYAKAIGNLMYAMLGTRPDIAYAVSYCSRFLAKPTEAHRAAVKRIMRYLKATIDLCLVYEGEIEP--LTGFTDSDWAG 1170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig592.13546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H6GH72_FUSOX2.630e-2734.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Q2UZT8_FUSOX3.820e-2739.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A409X4K8_9AGAR2.110e-2635.52Integrase catalytic domain-containing protein (Fra... [more]
A0A8H6GAL8_FUSOX3.820e-2639.44Uncharacterized protein n=3 Tax=Fusarium oxysporum... [more]
A0A420MDK5_FUSOX3.920e-2639.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K0UHG8_GIBNY4.090e-2639.44Integrase catalytic domain-containing protein n=2 ... [more]
UPI00142E19AD4.190e-2633.89uncharacterized protein LOC103874474 n=1 Tax=Brass... [more]
A0A0F7ZXE1_9HYPO4.810e-2639.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H6G7V4_FUSOX4.840e-2634.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0B4HDI7_METMF5.680e-2639.89Gag-Pol polyprotein (Fragment) n=2 Tax=Metarhizium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..80
e-value: 1.6E-12
score: 47.6
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 3..177
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig592contigH-paniculata_contig592:24031..24795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig592.13546.1mRNA_H-paniculata_contig592.13546.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig592 23909..25362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig592.13546.1 ID=prot_H-paniculata_contig592.13546.1|Name=mRNA_H-paniculata_contig592.13546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MAVYVDDLVIAGRREKVDEFKQNISRCSRMKDLGPLSPVLGIEVRRDRTN
DAISTSQGGYIREVLKSYGFDECRGVSTPVEENVKILAPDNRGRCGSSTK
YRGMVGSLMYASTGTRLDTAYPVHQAARRMEDPCGEDFSTCKRIFRYLST
VPDLSITFGGKSNGHGLEGFVDAQLGGRSRGPKVHNRIRIQTKRWCDTLV
LLEATASHVVQYRDRVSCCRRSGKGDGIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like