prot_H-paniculata_contig592.13544.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig592.13544.1
Unique Nameprot_H-paniculata_contig592.13544.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length496
Homology
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 6.490e-114
Identity = 225/421 (53.44%), Postives = 254/421 (60.33%), Query Frame = 0 
Query:   88 NMQSPYGAYWHSGDVTGYGGTMSNGVSNYASGFAANETGVRDAGSRGG--NANKA-------HYPGQAGSQXXXXXXXXXXQQQPRSVGDQYI-SRQPQAYEAAAVPDYSRCVCVQGAYAIPNVGA--GGPYGTVALGYAGGYSIAASPKIDGGARDRRRSRGRSGSVTSSTTGFG-GPDPQRESELSLATENLTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPVFVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNTPSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            +MQSPYG YW SGDV+GYG  MS G+S +  G+ A+++GVRD  S     N NKA       HY    G                R+VGDQY  +RQ Q                          A  G  YG       GG    +   + GGA                  GFG G DPQRE+ELS+A ENLTLEEI+GNVFRMSKDQ+   LLQLKL+QGDPVFVSKICGEAQPYL++MMKDPFGNYLFQKIADKVDE GRT+LV           MNLHGTRSVQK+IEVCR TPSQVA+VVSAL+DATV LCLDTNGNHVVQRLLQHLAP+ N F                          DAA  EQ+R+LV+QV  +ALQLMQDPYGNYVVQYVLGIC  +EA  LV VPLGKV
Sbjct:    3 SMQSPYGGYWPSGDVSGYG-AMSTGISTFGGGYGASDSGVRDTASTTSSININKANHNHSIHHYLASPGGSVAGPPSGQ------RAVGDQYGGARQHQQPXXXXXXXXXXXXXXXXXXXXXXXAAYDGRDYG-------GGVRSGSIVSMGGGA------------------GFGSGGDPQRETELSVAMENLTLEEIDGNVFRMSKDQVSV-LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKV 390
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 1.430e-94
Identity = 153/199 (76.88%), Postives = 169/199 (84.92%), Query Frame = 0 
Query:  222 ASPKIDGGARDRRRSRGRSGSVTSSTTGFG---GPDPQRESELSLATENLTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPVFVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNTPSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFE 417
            ASPK+DG  R++RR R RSGS+ S   G G   G +PQRE+ELS+A ENLTLEEIEGNVFRMSKDQIGCRLLQLKL+QGDP+FVSKICGEAQPYL++MMKDPFGNYLFQKIADKVDE GRT+LV           MNLHGTRSVQK+IEVCR TPSQVA+VVSAL+DATV LCLDTNGNHVVQRLLQHLAP+ N FVFE
Sbjct:   13 ASPKMDGLGREKRRDRVRSGSIVSMAGGAGFGSGGEPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFE 211
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.180e-64
Identity = 119/233 (51.07%), Postives = 152/233 (65.24%), Query Frame = 0 
Query:  264 ATENLTLEEIEGNVFRMSKDQIGCRLLQLKLE-QGDPVFVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNTPSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            A   L +E+++G V+ MSKDQ GCRLLQ +L+  G P     I  EA P+L DMM DPFGNYLFQK+ ++V +  R E+V           +NLHGTRSVQKV+EVC    +   ++V ALR   V LC+D+NGNHV+QR LQ L    N FVF+ +A  C  V THRHGCCVLQR +DAA   Q R +++QV ++A++LMQDPYGNYVVQYVL  C  +E   L+    G V
Sbjct:  249 ANVTLAVEDLQGRVYAMSKDQNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHV 481
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 221 bits (564), Expect = 5.050e-61
Identity = 118/233 (50.64%), Postives = 155/233 (66.52%), Query Frame = 0 
Query:  258 ESELSLATENLTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPVFVSKICG----EAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNT--PSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEA 484
            +S  SL    LT+++I+G V+ MSKDQ GCRLLQ   EQ D V  S +C     E+ P+L DMM DPFGNYLFQK+ ++V +A R  +V           +NLHGTRSVQKV+E+C ++  P+ V L+V AL++  V LC+D+NGNHV+QR LQ++    N FVF+ +   C  V THRHGCCVLQR +DAA   Q   ++ QV  +A++LMQDPYGNYVVQYVL  C   +A
Sbjct:  325 DSASSLFGATLTIDDIQGRVYAMSKDQNGCRLLQ---EQLDFVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADA 554
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 217 bits (552), Expect = 1.120e-60
Identity = 130/290 (44.83%), Postives = 168/290 (57.93%), Query Frame = 0 
Query:  240 SGSVTSSTTGFGGPDPQRESELSLATENLTLEEIEGNVFRMSKDQIGCRLLQLKLE---QGDPVFVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVC-------------------------------RNTPSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            SGS+++   G    DP   S LS A   L++++I+  VF MSKDQ GCRLLQ +L+   +GD   V  I  E+  +LA+MM DPFGNYLFQK+ ++V E  R  ++           +NLHGTRSVQKV+EVC                               R T S   L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   ++ QV   A++LMQDPYGNYVVQYVL  C  EEA  ++  PLG +
Sbjct:   56 SGSMSAPMMGGSATDP---SSLSAA---LSVDDIQNRVFAMSKDQNGCRLLQEQLDYEDRGDLCDV--IYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHI 337
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A024GRC2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRC2_9STRA)

HSP 1 Score: 222 bits (566), Expect = 3.460e-60
Identity = 119/239 (49.79%), Postives = 154/239 (64.44%), Query Frame = 0 
Query:  268 LTLEEIEGNVFRMSKDQIGCRLLQLKLEQGD-PVFVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNTPSQVA----------LVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            ++ E+I+G V+ MSKDQ GCRLLQ +LE  D  V    I  E+  +L +MM DPFGNYLFQK+  + DE  R  +V           +NLHGTRSVQKV+E+C NT S+ +          LVV AL+D  V LC+D+NGNHV+QR LQ+    +  F+F+ ++  C  V THRHGCCVLQR +DAA   Q + L+ QV  +A++LMQDPYGNYVVQYVL  C  EEA  ++  PLG V
Sbjct:  535 ISEEDIKGRVYSMSKDQNGCRLLQEQLEYDDRKVLWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHV 773
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A6G0WN87_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN87_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.050e-59
Identity = 116/250 (46.40%), Postives = 160/250 (64.00%), Query Frame = 0 
Query:  254 DPQRESELSLATEN-----LTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPV-FVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNT--PSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            +P+  S   L +E+     +++++I+G VF MSKDQ GCRLLQ +LE  D       I  E+ P+L DMM DPFGNYLFQK+ ++V +  R  +V           +NLHGTRSVQKV+E+C ++  P  + L+V AL++  V LC+D+NGNHV+QR LQ +    N FVF+ +   C  V THRHGCCVLQR +DAA   Q + ++ QV  +A++LMQDPYGNYVVQYVL  C   +A  ++   +G V
Sbjct:  284 NPELASPSGLPSESPPHTSISIDDIQGRVFAMSKDQNGCRLLQEQLEFDDRADLCDVIYAESLPHLVDMMVDPFGNYLFQKLLERVSDTQRLVIVQHVSFHLVAAALNLHGTRSVQKVVEICASSSHPLLIELIVDALKEDAVRLCIDSNGNHVIQRALQFMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANASQKKEVIAQVEKHAMKLMQDPYGNYVVQYVLDACLPADALGVMEKCVGHV 533
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: A0A8K1C9G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL)

HSP 1 Score: 221 bits (564), Expect = 1.120e-59
Identity = 118/245 (48.16%), Postives = 151/245 (61.63%), Query Frame = 0 
Query:  268 LTLEEIEGNVFRMSKDQIGCRLLQLKLE--QGDPVFVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNTPSQVAL---------------VVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            L +E++   VF MSKDQ GCRLLQ +L+  +        I GE+  +LA+MM DPFGNYLFQK+ ++     R E++           +NLHGTRSVQKV+EVC  +   V L               +V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q R ++TQV   A++LMQDPYGNYVVQYVL  C  EEA  ++  PLG V
Sbjct:  560 LKVEDVRNRVFAMSKDQNGCRLLQEQLDFYEERKELCDVIYGESVEHLAEMMVDPFGNYLFQKLLERAKPLQRLEIIRRVSGNLVAAALNLHGTRSVQKVVEVCATSAEVVELDSDGNELRRVNLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANDTQKREVITQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNV 804
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: F0WL38_9STRA (Uncharacterized protein AlNc14C140G7225 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL38_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.510e-59
Identity = 118/243 (48.56%), Postives = 156/243 (64.20%), Query Frame = 0 
Query:  263 LATENLTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPVFVSKIC-GEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVCRNTPSQVA---------LVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            L T +++ E+I+G V+ MSKDQ GCRLLQ +LE  D   + +I   E+  +L +MM DPFGNYLFQK+  + DE  R  +V           +NLHGTRSVQKV+E+C  + S+           L+V AL+D  V LC+D+NGNHV+QR LQ+  P    F+F+ ++  C  V THRHGCCVLQR +DAA   Q + L+ QV  +A++LMQDPYGNYVVQYVL  C  EEA  ++  PLG V
Sbjct:  518 LTTLSISEEDIKGRVYSMSKDQNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHV 760
[Close]
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Match: K3W6G7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6G7_GLOUD)

HSP 1 Score: 221 bits (562), Expect = 3.650e-59
Identity = 124/276 (44.93%), Postives = 164/276 (59.42%), Query Frame = 0 
Query:  248 TGFGGPDPQRESELSLATENLTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPVFVSKIC-GEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVXXXXXXXXXXXMNLHGTRSVQKVIEVC---------------------------RNTPSQVALVVSALRDATVTLCLDTNGNHVVQRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARMLVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV 495
            +G G   P   S LS A   L++E+I+G VF MSKDQ GCRLLQ +L+  D   + ++   E+  +LA+MM DPFGNYLFQK+ ++V E  R  ++           +NLHGTRSVQKV+EVC                           R T +   ++V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA  +Q   ++ QV   A++LMQDPYGNYVVQYVL  C  EEA  ++  PLG +
Sbjct:  598 SGSGLLTPSDPSGLSAA---LSVEDIQGRVFAMSKDQNGCRLLQEQLDYEDRKDLCEVIYQESLDHLAEMMVDPFGNYLFQKLLERVSEKKRLAIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSAEVIEDGMYDDLDDDAGERRPNGVRRTVNLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKQQKAEVIAQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNI 870
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig592.13544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3P5_9PHAE6.490e-11453.44PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGB5_ECTSI1.430e-9476.88PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9YPP5_9STRA2.180e-6451.07Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KML4_9STRA5.050e-6150.64Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]
A0A833SFT8_PHYIN1.120e-6044.83Pumilio-family RNA binding repeat domain-containin... [more]
A0A024GRC2_9STRA3.460e-6049.79Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A6G0WN87_9STRA1.050e-5946.40Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1C9G3_PYTOL1.120e-5948.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WL38_9STRA1.510e-5948.56Uncharacterized protein AlNc14C140G7225 n=1 Tax=Al... [more]
K3W6G7_GLOUD3.650e-5944.93Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 272..307
e-value: 0.021
score: 24.0
coord: 418..453
e-value: 1.3
score: 18.1
coord: 454..489
e-value: 2.2E-4
score: 30.6
coord: 382..417
e-value: 1.0E-4
score: 31.7
coord: 308..343
e-value: 0.024
score: 23.8
coord: 344..381
e-value: 160.0
score: 3.5
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 458..486
e-value: 2.1E-6
score: 27.1
coord: 385..411
e-value: 9.1E-6
score: 25.1
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 308..343
score: 8.594
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 272..307
score: 7.031
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 344..381
score: 7.171
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 418..453
score: 8.104
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 382..417
score: 8.967
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 454..489
score: 9.667
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 265..492
e-value: 3.5E-73
score: 248.2
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 55..494
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 55..494
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 251..495
score: 56.952
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 266..488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig592contigH-paniculata_contig592:380..7768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig592.13544.1mRNA_H-paniculata_contig592.13544.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig592 380..7789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig592.13544.1 ID=prot_H-paniculata_contig592.13544.1|Name=mRNA_H-paniculata_contig592.13544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=496bp
MGQMQSGMYYGGGGYGVAAAQGAGSPALSHMSQAAGGYPTSPGQGVGYGL
QSGQQMGAMDMQQGMAAGYPVGAGGMVPNMAVLPGTPNMQSPYGAYWHSG
DVTGYGGTMSNGVSNYASGFAANETGVRDAGSRGGNANKAHYPGQAGSQP
GQQPGQPGQQQQPRSVGDQYISRQPQAYEAAAVPDYSRCVCVQGAYAIPN
VGAGGPYGTVALGYAGGYSIAASPKIDGGARDRRRSRGRSGSVTSSTTGF
GGPDPQRESELSLATENLTLEEIEGNVFRMSKDQIGCRLLQLKLEQGDPV
FVSKICGEAQPYLADMMKDPFGNYLFQKIADKVDEAGRTELVNKVADQMV
EAGMNLHGTRSVQKVIEVCRNTPSQVALVVSALRDATVTLCLDTNGNHVV
QRLLQHLAPSANGFVFEMLAEACVPVATHRHGCCVLQRAMDAAIPEQARM
LVTQVCINALQLMQDPYGNYVVQYVLGICEREEADTLVTVPLGKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold