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Homology
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: D8LC70_ECTSI (ROK family glucokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC70_ECTSI) HSP 1 Score: 283 bits (725), Expect = 1.330e-81 Identity = 189/427 (44.26%), Postives = 233/427 (54.57%), Query Frame = 2
Query: 2 RETGVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAEFAGRDDEETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAKIFSERRRAKA---WRQPSIPPGIRPKSSLSXXXXXXXXXXXXXPGGLMACPLEDIDPVLTSNQTPTPSKSAP-IFPRAAFSREGSSGVKDRIRELERKTSMEKEVAAMARAEAAAVVAGGVAIGSTVHPPPSPSSTPASPSTKGGNMTATPAGGLFALVPLSSDANGGSSNGVIEKKTEEDGYSGVAKGVGSNGIANGNGTKVGHTGLTSEDVFRMAAEGDRVAVGVVREACAYLGLACVNVCRVVDPDVILLAGGMSQAAGLVDKVRQEFTARGWNILPHECHIELANACAPCSSGVVGAAGAAACEHA 1270
RE GVV+GAS+FP+W NVPLA++VQD+T P TVLNDASAAASAEFA R +ETIAVLTLGTGIGLGVV GR+++G RGL+EGGHMIV+PGP+ RLC CGQRGCLE YASA+AVA I SER + + PS P ++ E+ D V + TP+ +P I R S V RI ELER+TS E+ +A A AG +G ++ G G K+ T+ DVF MA +GD VAV VV E C YLGLACVN+CRV+DPD ILLAGGMS+A GL++KVR+ F++RGW +LPHEC I+LA C +GV+GAAGAA CE+A
Sbjct: 85 REAGVVIGASTFPAWHNVPLANLVQDRTGRPVTVLNDASAAASAEFASRGSQETIAVLTLGTGIGLGVVCAGRVVTGCRGLVEGGHMIVEPGPNGRLCACGQRGCLEMYASASAVAAIASERLGSGGGDLFPAPSDTPYCNGETG------------------------EEPDAVAPT----TPTHGSPGISRRRGSINRSDSAVSLRIMELERRTSAEQRASAPASXXXXXSAAG----------------------RRGSRLS-------------------------------------------------GGGAKI-----TAADVFSMAKKGDEVAVRVVEETCDYLGLACVNICRVLDPDAILLAGGMSKAEGLLEKVRKSFSSRGWKVLPHECEIDLAKTCV--DAGVIGAAGAACCEYA 405
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A7S2RL15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL15_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.800e-27 Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 2
Query: 11 GVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAE-FAGR-DDEETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAKIFSERRRAKAWRQPSI 400
GVV A++FP W++ PL D V P VLNDA AA AE + G +A++TLGTGIG+GVVS G+L+ GSRGLIE GH IVD GP ARLC CGQ+GC+EAYASA +VA E A PS+
Sbjct: 124 GVVHAAANFPEWAHAPLGDAVAHALRCPVFVLNDADAAILAERWVGEAKGSGEVAMVTLGTGIGVGVVSGGQLVQGSRGLIEAGHSIVDSGPSARLCGCGQKGCIEAYASARSVAARAREVFAASGHSGPSV 255
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A482RSB0_9ARCH (ROK family protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSB0_9ARCH) HSP 1 Score: 120 bits (302), Expect = 6.810e-26 Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 2
Query: 14 VVVGASSFPSWSNVPLADMV-QDKTYLPTTVLNDASAAASAEFAGRDDE----ETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAKIFSE 364
V+V AS+ P + NVPLADM+ ++ ++PT ++NDA AA AE G + IA++TLGTGIG G+V N +L GS GL+EGGHM+V GP++RLC+CGQ GC+EAY+SA+ A+ E
Sbjct: 88 VLVAASNLPLFKNVPLADMISREMGHIPTVLVNDADAAICAEVFGHAETYQSMRNIAMVTLGTGIGFGLVLNNQLFQGSHGLLEGGHMVVATGPNSRLCDCGQMGCVEAYSSASNTARRLEE 209
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: F0W362_9STRA (Glucokinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W362_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.420e-24 Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 2
Query: 2 RETGVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAEF---AGRDDEETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAV 346
++GV+ A++FP+W+NVPL + Q + L +LNDA AA AE A + E ++TLGTGIG+GVV +GRL+ G+RGL+EGGHMI++ + R C C QRGCLEAYASATA+
Sbjct: 159 NQSGVLQAAANFPTWANVPLKQLFQQRLGLKVELLNDADAAVLAEIWVGAAKKVVENFIMITLGTGIGVGVVIDGRLIRGARGLLEGGHMIIEK--NGRPCPCSQRGCLEAYASATAL 274
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A7R9UAB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAB7_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.680e-23 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 2
Query: 11 GVVVGASSFPSWSNVPLADMVQDKTY-LPTTVLNDASAAASAEFAGRD----DEETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAKIFSER 367
G V A++ P W +VPLA +Q + PT ++NDA AA AE D D E I +LTLGTG+G G++S GRLL GSRG IEGGH+IV PG R C CGQ GC+EAYAS A+ + + E+
Sbjct: 83 GKVSAAANLPGWRDVPLAQELQQRCGDRPTFLVNDADAALEAEVWTGDESIRDVEDIVLLTLGTGVGTGILSGGRLLQGSRGCIEGGHVIVHPG--GRRCGCGQNGCVEAYASGRALGERYMEK 204
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A024FZ74_9STRA (Uncharacterized protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ74_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.420e-22 Identity = 59/118 (50.00%), Postives = 82/118 (69.49%), Query Frame = 2
Query: 2 RETGVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAEF---AGRDDEETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAV 346
E GV+ A++FP+W NVPL + Q++ +LNDA AA AE A + D ++ ++TLGTGIG+G+V +G+L+ G+ GL+EGGHMI++ D R C C QRGCLEAYASATA+
Sbjct: 398 NEYGVLQAAANFPAWVNVPLKQLFQERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEK--DGRQCGCSQRGCLEAYASATAL 513
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: X1HYI0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1HYI0_9ZZZZ) HSP 1 Score: 106 bits (265), Expect = 3.950e-22 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 2
Query: 5 ETGVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAEF--AGRDDEETIAVLTLGTGIGLGVVSNGRLLSGSRGL-IEGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAK 352
+ GVV+G + P + NVPL D + ++ LPT + NDA+AAA EF G D + +LTLGTGIG G+V +GRL G+ G+ E GHMIV+PG + C CGQRGCLE YASA +A+
Sbjct: 79 DAGVVIGMPNIPGFENVPLRDRLAERLSLPTVLENDANAAALGEFLVGGGRDVNRMVLLTLGTGIGGGIVIDGRLARGAHGIGAELGHMIVEPGGER--CGCGQRGCLERYASAAYLAQ 195
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A2D5Z0Q1_9BACT (Glucokinase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z0Q1_9BACT) HSP 1 Score: 108 bits (270), Expect = 6.600e-22 Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 2
Query: 5 ETGVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAEF---AGRD-DEETIAVLTLGTGIGLGVVSNGRLLSGSRGLI-EGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAKIFSE 364
E GVV A + P W +V L D + + T P + NDA+AAA EF AGRD D + +LTLGTGIG G++ +GR++ G GL EGGH+IV P D RLC CGQRGCLEAY SA A+ E
Sbjct: 78 EAGVVKAAPNLPGWIDVRLRDRIAEATGCPAVLENDANAAAFGEFWAGAGRDPDIRHLVMLTLGTGIGSGLIVDGRVIHGGYGLGGEGGHIIVQP--DGRLCGCGQRGCLEAYTSAAQAARRAQE 200
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A485KYB9_9STRA (Aste57867_12718 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYB9_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.510e-21 Identity = 54/114 (47.37%), Postives = 79/114 (69.30%), Query Frame = 2
Query: 11 GVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAEF--AGRDDEETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAV 346
G++ A++F SW +VPL ++ ++ ++P ++NDA AA +AE + + +LTLGTGIG GVV+N +L+G G+IEGGHMIV P + RLC C Q+GCLE Y+SATA+
Sbjct: 78 GILHAAANFESWKDVPLERLLHEQLHIPCKLVNDADAAVAAEHWVGAASNVKNFVMLTLGTGIGFGVVNNNDILAGGTGMIEGGHMIVVP--NGRLCGCTQKGCLERYSSATAL 189
BLAST of mRNA_H-paniculata_contig5919.13543.1 vs. uniprot
Match: A0A024U6C6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6C6_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.170e-21 Identity = 57/114 (50.00%), Postives = 81/114 (71.05%), Query Frame = 2
Query: 11 GVVVGASSFPSWSNVPLADMVQDKTYLPTTVLNDASAAASAE-FAGRDDE-ETIAVLTLGTGIGLGVVSNGRLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAV 346
G++V A++F SW +V L M+ + ++P T++NDA AA +AE + G + + +LTLGTGIG GVV+N +L+G G+IEGGH+IV P + RLC C QRGCLE Y+SATA+
Sbjct: 101 GILVAAANFASWKDVALERMLNESLHVPCTLVNDADAAVAAEHWVGTASKAKHFIMLTLGTGIGFGVVNNDSILAGGTGMIEGGHLIVVP--NGRLCGCTQRGCLEQYSSATAL 212
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000 |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 251.5 |
| Seed ortholog evalue | 8.6e-64 |
| Seed eggNOG ortholog | 2880.D8LC70 |
| Preferred name | GNE |
| KEGG rclass | RC00002,RC00005,RC00017,RC00288 |
| KEGG ko | ko:K12409 |
| KEGG Reaction | R00414,R02705 |
| KEGG Pathway | ko00520,ko01100,map00520,map01100 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006054,GO:0006082,GO:0006793,GO:0006796,GO:0007155,GO:0008150,GO:0008152,GO:0008761,GO:0009058,GO:0009384,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016853,GO:0016854,GO:0016857,GO:0016999,GO:0017000,GO:0017144,GO:0019200,GO:0019752,GO:0022610,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046380,GO:0046394,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576 |
| EggNOG free text desc. | UDP-N-acetylglucosamine 2-epimerase activity |
| EggNOG OGs | 2QUGI@2759,COG1940@1 |
| Ec32 ortholog description | ROK |
| Ec32 ortholog | Ec-20_004670.1 |
| EC | 2.7.1.60,3.2.1.183 |
| COG Functional cat. | GK |
| Best tax level | Eukaryota |
| Exons | 5 |
| Model size | 3224 |
| Cds size | 1584 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5919.13543.1 >prot_H-paniculata_contig5919.13543.1 ID=prot_H-paniculata_contig5919.13543.1|Name=mRNA_H-paniculata_contig5919.13543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=528bp
MVQDKTYLPTTVLNDASAAASAEFAGRDDEETIAVLTLGTGIGLGVVSNG
RLLSGSRGLIEGGHMIVDPGPDARLCNCGQRGCLEAYASATAVAKIFSER
RRAKAWRQPSIPPGIRPKSSLSLSAATATAGGGGGPGGLMACPLEDIDPV
LTSNQTPTPSKSAPIFPRAAFSREGSSGVKDRIRELERKTSMEKEVAAMA
RAEAAAVVAGGVAIGSTVHPPPSPSSTPASPSTKGGNMTATPAGGLFALV
PLSSDANGGSSNGVIEKKTEEDGYSGVAKGVGSNGIANGNGTKVGHTGLT
SEDVFRMAAEGDRVAVGVVREACAYLGLACVNVCRVVDPDVILLAGGMSQ
AAGLVDKVRQEFTARGWNILPHECHIELANACAPCSSGVVGAAGAAACEH
ARQARRELRRSRASSRCSMRGESDADASPSREHSVLDSGGNNDNSVDTSR
QEQQRGTEAVGVVGIEGAISQSGRRGGYAGGAKERGDKETKGKWGGGGFA
TGSAVVGVAVLAGVAVVHAQRGGRAGR* back to topmRNA from alignment at H-paniculata_contig5919:1649..12138- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5919.13543.1 ID=mRNA_H-paniculata_contig5919.13543.1|Name=mRNA_H-paniculata_contig5919.13543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10490bp|location=Sequence derived from alignment at H-paniculata_contig5919:1649..12138- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGAGACAGGCGTTGTCGTCGGGGCTAGCAGTTTCCCGTCCTGGAGTA
ACGTGCCCCTCGCCGATATGGTGCAAGACAAGACATACCTCCCGGTGCGT
GGTCGTATCTACTACCCCCTAACGGTGTATAGATAGGTTTCGTCAACGAA
AAGTCGTGGATAGTGATGGATACATTTTACTAAATGCGTATCTCATGTCC
CAGAGGGTGGCGGGTATTTTGCATTGTGACGCCTGTCCTGTTGGATTCAG
TCTAGCCGGGGGGAAACCGATCGAATCACTAGATTTGCTTCTTACTTATC
ACATAAGATGACGAAGCAAGGCAACCCTGTGTACGTCATTCACGGGTCAT
GGGGTCAGAAGCCCGAAGGGTTGAAAAGTTTACGGTGGCCTCTTAATAAC
AAGTATTTCTCCGACACGCGAGCTGTCTGTTGGGCGATGTTTTCGCCGCC
GAAGAGGTTTTTGATGTTTTATACCATTCGGTAGTTCACCCTATTTTCTT
ACATCATACACTGAAGTGGATTCAGTCGCAATTCTGGAAGATGATCATTG
TTCTAGTTTTTTATATCGGGTTCGCCCACGATTTCATAGATGGTACTCGG
GCCTGTTCGAAAGGTCTCGCTTGCAGCTACCTGGTTTGAATATGTGTGTG
TGTTTTTTTTTTTCCATTTGTGAATGGCGTTTCACAGTAATTTCACCGAG
CGATTGTTTTCCCATGATTCTACAGGGCGGTGGAGGATAACAAATGCTCT
TTGTCACGCGACGTTCACGACGTAGTTCTTGGATGAAGCAAAATTCCATC
AGGAGTATTGGTCATGTGACTGTGGTCGGAGCTGGGGTGTACGATTATTT
TTCTTGCGTGGATTGTCGGTTGTTCGGTTTTCGCGTGCGGTATACAGAGG
GACTTTTGATTCGCATGCAAAGTGCACTACCGCTCGGTGTGCGTTTTAGT
AGTATGTGGGATGTTTTCTGTCCCTAGTCGGCAGGTGATCTTGGGCTTTC
GACATATCAAAACTTACAGTGGGGTCTTCGATAAGAAATTGGAGCGAAGA
TACTTGAAATAATTTTTTACAAGACACTGGTTGATGGAAACAGTTGTGAG
TATGTGCCTATCTGCGTGGAGGCCCGATGTTGGATAATGCCTAGGAAACG
CCATCAGCTGCGCATGCTATATACGTTATCTCAATGACAATTGACCAAGA
TGAACGATAGCGTTTACAGAAAGATTAGCCCCCTAAAAATTGCTGCATTG
CACGGTGCAAGCACGTGTGTTTTGTCAAGACTTGCCCCGTCTTACCACGT
TTTGTATGCTGTATCTACTCAAGGCCACGTGGTGGATGGCTCACTGTCCA
AGGAACATTCCTGATAAAGCAGTCAATACACAAGCCTACTTTCAAATTTT
TACTTTAGCAATGCAATCTACGAAATTCGGCCAAATTTGAAAGTTACAGT
TTTGTGCTAGACACCAATAATCGAGCGCGACGCCGCCTATCATATGTCAC
CCACCAGTATCACAGGTGCGTATTACCCGGTGGCTACCATGGGAACACTG
AGTATTGCAACAACGATTCTGCGCTCTCGCAGCTGTCTCCGAAAGGTTGA
CGCTGTCTTTACCGTCTGAGATTTGAACTTTACCGCCCAAGAAATATGGT
TAAAGAATGGCTCCTCGACATACCCCTCGATCACTTCCTCACTTTTGATT
CTCAAGTATGCTTGGAATCGTGGGATTGCCATACGAAGGCGATAGCGATG
TCAGGCGATGGATAGTTGCTAGAAAGACAGGCGAGGATTGCTGTGCAGCG
ATAGGATGGGGCATTAATATTTTAGCCGTCTTCGGCGGAATACTAAAAAG
TGATAGATGTCCCATGAGCGATTGTTCTTGAAGGAGAAAGAAGTGTTGTC
CGATGGATGATGGCTTGGCGTTGGTGATCTAACAGGTAAGTCATGCAAAA
ACAAGACTACGCCCCTTGGTTGATGATCACTTTGTTTTGCTCGATTTATG
CCAACAATATGCCACTCTTTTGATTTGTTGGAAAATAACCGGTTTTCATC
TGAAACAATTTACTCTGCGAGACGAGCACGCCCTCCAGTATGCCCCCTCC
CTCGTCATCCTCCAAACCTCAATCAGTCTGAAGACCCTTTGCACCCCACA
CTGCCCCCTTTTTTTTTTTTTTTTTTTCTGTGCTGTTGGGATCAGACAAC
GGTGCTGAACGATGCTTCAGCAGCCGCTTCGGCTGAGTTTGCTGGTAGAG
ACGACGAGGAAACGATAGCGGTGCTCAGTGAGTATTACGTACTGTCGTTG
ACTTTGGCGTAGTTATGATTGCCACTGTTGTCTAGTGAAAAGCCCTTGGA
CACCATCGAAGCTTCCGGTAAGTGGCGCGTCGAGTTCTAAGGTTGTTGTG
TAGGTACAACAAGATCCCCCAAGTTTTAACCTCGGCTACGCGACAAGAGT
TTTCGAGTGACAGGTGGTGGCAAGGCTCCTCTTGAAGAAACCGTTCTTTC
AAGTCTATGTCGGTAATTTGATGCGAATATCCCGTAGCGTTTGACGGTTG
AAGCGAAGGGTCTCCCCGCCAGAAGCTCTCTTTAACCCTTTGGGAGCCGA
TGATAAATTTGCATCTTTCGTGTACTTCCATGTGTGTAGTGGAATCTCGG
ATAGGAGCTCCTTCTCTCAAGACCCTGGATTCCACATACTGTGGTTTTTG
TTGGTGGGTGTAGTCCAGCGTATGACGGAAGGTTGGGTAAAGGAAGATGG
AGGGGTGAAGACTGGTGGACACATACCAACCGTGTTTCAAGTCATTCGTA
AACTTGACGGTCACAATCAAGTACCGTTTTTTGTTTTTTGTTTTTTTTTG
TCAACCCCCGGAAGGCTGAGTCAAAAACCTTTATCCGATGCTTCCATACC
TAAATATTTCTACCGAAGTATTTCTACATTTCCTTTAACAGGACAGAGTT
ATTTATTACTCTGCGGGATAGGCGCCACCCCGGTTGGGCCGAACCAAGTA
GGCAGTGTGGGGGTTGCATCCACTAAAAGACCTCTGACTAGACTTCCAGT
CATGCTTAGTTCACGAGCTACCCTAACCCGTTCGGGCGTAGGTCCGTGGA
ATCAAGTTCCGTAACACCGTTTAATATCGCATCCCATTGATATATATTTT
TTCCAAGACCGATTTTCTTGATATATATATATTTTCCAAGATCAATTTTC
TTGATAAGAACGGTGCGGGCTCATGACACCGATAGCGGTGTCGTTGGAAG
GGTTTCGTTGAGATCGTTGGATACACACCTGCTGATCCCGCTGTGCAAGC
TCCCTCGTGTTTTTCGAGAATAAATGGGTTTGGTATATATTATGAAGGGG
TGCTATATCGAATGGTGTTATGGTAGATAGTTTCAGACATTGTGTAAACA
TCAACAGGCTCACTTGACCGCACTTGTGTTTGGGGAGTGCGAGAGGGGTG
TGAAGTATCACGGCACACGAGTGAGGTCAACATGGCACCATTCTGTGCGT
ACGGTTACATGTGTTCGGAGTAATGTATGTCTGAGTTTGTATTGATCGGT
TGTGGAACAAGACTAATATGTTGCGGTATCTAGCGTTGTGTATTCGTGGG
GAACATGATGTAGTCGAGACTGGGCATTGCGTTGTACTGGCATTATAGGG
CAGCGCAAGCACTCTGGCTGGTGACGGGGGCACCGCTGGAGGCGCCCCCC
GAAGGCGGAAAAATACGTGATGTGGCTTCATTTCGCTTTTACAGGAGTTC
AGGTCAAATCGACCAACCGAGTATATAAAAAGTAAACTCACAGCAAACAA
ATGGTTGAAAATTGGGTGACCTGAAAATATATGTGCTTGGTAAGAATGCC
TGTCTGTGAACCGCTGTATACCACCTGGTTTTAACATGTGAAATGCAGAA
CCTGATTTTTTTTACTTGATTCTTGGATGAATTCGAACGTGGTTGTGATA
TTGATGGTCGTTTGTTTTCATTCGCAAGCATCATCTCGACGGTGTACGGT
GCCGTACTCTTGTGGCAACCTTTTAAATATCACGGCATTTTTGCAAGCTC
TTGAAATGCTAGTGTACATCTCGTTTTTGTTGTGCATTTCTTGGGAAAAC
GCCCTAGGTGTGTGTGGTCCATGTCAAATACGACGCGTGTTTCCCACACG
AATTAAGGAAAGACCAGCAGTGCCACAAAGGGGAAGGAGAGAGCGAGACG
GGCGCATGCTTGTAATATCAAGGGTGGCAAAATATTTCTCACAGAGAAAT
TCTGGCGTATTTTAGGATCTTCCGTACGTGGTTTTGTTCCTTAGAGATTT
TACTGCTGTCAGTTGAGCAACTACTTTTAAATGTTTTATTTTGGCGGAAA
TGATCCATGGCTATTGACTGTCAGCGTCACGTCATCAACGTTCAAGGTTT
CCAACGTCACCCCACGTCACTTTTACGTTGGTTCTAACGTTAAAATGACA
TTCAACCGTAGGATTGAAGTTTAGTTTAACGTTGAAACTTAACGTCACCG
CTGAAATGAACGTTGACGTGACGTAGAACGTGATACATTATTGTATTCCT
GCTGTAAGCATCATGTGCACCTGTTGAATGGGCTGTGTACTACACAAGAA
GCGATAGCGTCTATAGATGAAATGAATAGAGCGGTGCGATCCGCCAGGTG
GTTCAAACTGTTGTCGAGCCGGCTCGGCCCAGCACAACATATGTCGCATG
TTAACACGGGTGCGCAAACGTATCGGGCACTAACACCTGAATAATAGCGT
TTACGGATGAAGTCATATCCTGTCATGCGTGGCTTTTGAAATAGGGGCTT
CATCACAGCGACGAAGCCGGTCATATCTCACGTATCATTCTCTTCGAGAG
TTTAAAGATGAAAGGCGGAGCAAAGAATCAACCAAAACAAATAAGGAAGG
ACGGAGTACATGTGGTGAAGCGAACACCAATCAAATACGGTCTGAGTATC
ATGGAAAAAGCCGCAGACATAATTACAGCTGCTATGCAGCGTTGTATTTT
TACGACTCAGCGTCCGCAACAGGGTTGCCAGAGTTGATGGTCCCTGGTTG
GAAATGGCTTCGAAAAGGTGCCTGCGCCATGGGAGTAGCCGATGGTGCTG
CTGAGGCAGTCTGTGGCGAGGCGCAGGTTGCTTCTGATGGCGCTGTCGAT
GGTTGTTGAGGCGAAGCGTGGTCCTCGACCGGTGCTCCTGCTGCACAGGG
GATCTCGGGGGTATCCATGCTCGTAACACTTTTCCACTGCAGCACGTCGT
ACGGCTTCGTTGAGCGTTGAACGTTACCCACCAAAAATAGACTGAGTGCG
GGTCGTGTATGTGGTGTGTGTCGTGTGTGACACATGTGACATTTGAACAA
ATGTTAGTTTAGTACTTGGAGTGATGTATGATTCGACACGTAATATTTTC
CCATTCTCCATACTCTTCGCTCAAAAACATGGTCGCTAGCTACCCTAAAG
CGCACCTTCATTTTCGCCGTCCCAACAATGGCCCGTTACCCTTCGCGCTC
GCTCGCCCTTCCTTGTATTTTCGTTTCACTGCGCACCAACCATCCTCGAT
CAGCTCTGGGAACAGGCATCGGCTTAGGTGTGGTATCTAACGGACGCTTG
TTGTCAGGATCAAGGGGGCTGATCGAGGGCGGCCACATGGTGAGCTAATT
TTTAGACCCAAACTAAAAGGACGAGAGTCATTTCACGGGGAGCGCGGGTG
TGTGTGTGCCATGTCTGTTTGAACCTGTGGACCTGGCAAGTCATGAAGGC
CCAAAGCTAGAACGGTAGTAATGCGATAGTATCCATATTTTGTGTCGTTC
TGCGGTGGGGAACGCGGATCGTTCTCGCTCTTACAACGTCCGCAACGAAG
AGCGTACCATGGCGAATATTAATTTCCCTTCCGCAGGCCAGCTTTGGCGT
GTACTAAACGTTTTCCGAAATTTGAAAAATAAAATAAAATGGCATATCGT
GAGAATTGAAACGACAACTTGTCACTTGATTGTCAATATGATGAGATTTG
GAGTTCGTCACTTTGACCTCGGGGCCCATAGAGTTAGAATGGCCCTCCTT
TTGACTGAGATAATCACGTGTGACCTGCGGGCAACTGGACGGTGGACAAG
TTGATGTATCGGATAACAAAACGACTGACAGTTAGTTATACACTAGTTCG
TTCATTTATTTTTATGAATTCGAAGTTGTTGTTTTTTTTCTTCGGATGCT
CTCTCAGACCTGTTTCTGTTCTTCCTGCCAAAATACGCTGTGATTTCCTA
GCGGTTTGAAATATAGTAGCTACAGCGGAGATCATCACGCTTCCGTATTG
TTGGTGCCGAGAGTGATACGCCATAGGATGAATGTTTGTTATTTGCTTCC
TCCTCTCTGTGCCTAAACCCTGGCACCGCTACTTAGTTAGTTTTCGGGTT
ATGACCCACGCTCGAAATATATCCACCATGTTGCAAAAGCGTTTACCTAA
CATGAGCTAGTCCAAGTTAGACAGTTTTTCATGTCAGATTTCAATTCACA
GTGTGCGCGAATCTGGGCAGAACTTTCCGATGAGCAGATCGTCAATGGGT
CATATTCACCGAGGAATTTTACAGAAATTTCCCGATTTCCTGCAGAGAAA
TTGATGTTTGTTAGGGCCACCTTTACGACACTATTGATACATCTCTCTCT
ATATATATTAGTGTACATGTAGTCAGGAATCAGCACGTCGGCTGACGGAT
ATCGTCGAAAATCGTCCCCCCAGACACAACTTCAGATGTCAACGGTAAAT
ACTATTGTCGATTTTGAAGAATTCAGGCCTCTTGGAAGCGCTCTGCGGTG
TGTACACGGGAGGTGTCCGGAGAATGGGCTCACGAAAATCACTCGGATAG
AGTTTAGGAAAACCTTTTGGAGACGGGAAATAAGCGTTTTATGTACCGTT
TATTCCGTACGGATTCGTATAATGTTGTAGAAGGAGCACAAGGTTACTCC
TGCACATTGGATATCCATCTAAGTGCATGTTGCTCAATCTCAGCGTTAAC
CGACCACTGAACCACGTCCCTTTTAGAACAGTCATCATGGATCGTCTGTG
TGACTTTCGCTTCTGTACGTCATTTTGTTTTGTTTTGTTTTTGGGGGGGG
GGGGCGGTAACCCCTACAGATCGTGGATCCCGGGCCAGACGCACGTCTTT
GTAACTGTGGTCAACGCGGTTGCCTCGAAGCTTACGCGTCCGCGACAGCG
GTGGCGAAGATCTTCAGCGAGCGGCGGCGTGCCAAGGCCTGGCGGCAACC
CTCCATTCCCCCCGGCATCCGCCCGAAGTCATCATTATCATTATCAGCAG
CAACAGCAACAGCAGGAGGAGGAGGAGGACCAGGAGGCCTCATGGCATGC
CCGCTGGAGGATATTGACCCAGTGCTCACGAGCAACCAAACCCCGACCCC
TTCCAAGTCTGCCCCAATTTTTCCTCGTGCTGCCTTTTCGAGAGAAGGAT
CCTCTGGCGTCAAGGATCGTATCCGGGAGTTGGAGCGCAAGACTAGCATG
GAGAAGGAGGTGGCGGCGATGGCGCGGGCGGAGGCTGCCGCGGTTGTGGC
GGGAGGCGTCGCGATTGGGTCTACCGTGCACCCCCCGCCGTCCCCTTCTT
CCACCCCAGCCTCTCCATCGACGAAGGGGGGAAACATGACGGCGACGCCG
GCCGGCGGACTCTTCGCCCTTGTTCCTCTGTCCAGCGACGCAAACGGTGG
TAGCAGTAACGGCGTGATCGAGAAGAAAACAGAAGAAGACGGTTATAGTG
GGGTCGCGAAAGGTGTAGGTAGTAACGGTATCGCCAATGGTAACGGTACG
AAGGTGGGACATACCGGGTTGACGTCGGAAGACGTGTTTAGAATGGCGGC
GGAGGGCGATAGGGTCGCCGTGGGTGTGGTGAGAGAGGCGTGTGCGTATC
TGGGCCTGGCATGTGTCAACGTCTGTCGGGTTGTGGATCCCGATGTTATT
CTGCTCGCCGGGGGTATGTCGCAGGCGGCTGGACTGGTGGACAAGGTGAC
AAATCATACGTGTTGCGACGATAGGCCTGTTTTTGTGCGGGTATACGAAC
GTTTGGTGTTTCCTATCTGTTTCCACACCGGTTGTAAATGACCTGTTTTT
GAGTTTGATGGTGTCAGCGTTAATGAGTTTCAGTGTCCAAAGCCGTACTA
TCTCGAGGTGTTTTACCGGACTGCAAGTAACTACAAACTTCTCAACATCT
GGTCGAGCATATCTATAGTTGATTGCAAACAAACTGGTTTGTCCGAGATG
TCGCTGCCGTTGTTGAGCCGAAACACGGGGTTGTCAGAGTTGGCATTGAG
GCAAACTAGCGTAGTCATCTGGGGCATCCAAACATCGCCCTGGCTACCCA
TATTGGTTAACGCTGCTCCCCTCTGCCTCCTCCCGCTTCCCCAAACAAAA
TCAGGTCCGCCAAGAATTCACAGCGCGCGGATGGAATATTCTTCCGCATG
AGTGCCACATTGAGTTGGCGAACGCCTGTGCTCCGTGTTCCTCGGGCGTG
GTCGGCGCGGCGGGGGCGGCGGCCTGCGAACATGCACGCCAGGCTCGCCG
CGAGCTACGGAGATCGCGAGCATCATCGCGTTGTTCAATGAGAGGAGAGT
CCGACGCTGACGCCAGCCCTTCTAGGGAGCATTCTGTGTTGGACAGCGGC
GGCAATAACGACAATAGTGTTGACACTAGTAGACAAGAGCAGCAAAGAGG
GACGGAGGCTGTCGGAGTCGTCGGGATCGAAGGAGCGATCTCACAGTCGG
GCCGGAGAGGAGGTTACGCTGGTGGTGCGAAAGAGCGAGGCGATAAGGAA
ACGAAGGGTAAATGGGGGGGGGGAGGGTTCGCTACCGGGTCGGCCGTCGT
GGGTGTGGCCGTTCTGGCTGGTGTGGCTGTTGTGCACGCCCAGCGCGGAG
GTCGGGCAGGTAGGTGAGTAGGTGTGTACGAGGTATGTACTTTGTTGGGT
GGTATGCTTGATACCGGGTTTTGTTTGTTGTTCCGCTCTCGTGTTTTTCG
GCTTCGGCTTTGACGTCGGCTTTGTTTGCGCCATCATGAAAACGTCCAAC
TGAGAATCGCCGCCCTAGTTGTTTATGTGTCTACTTCGATATTTTGGGAG
CGTATTATTTCGCGTGAAGAATTATTTCATTAGTGCCGAATTCTTGAGCC
GAGGCGGTGCGGTGTGTTCTGTGATGTCGGGATTATGTGCCTTGTTCTTC
CACAGTTGGAGAAGTAGGGTCAGTATGTACCTTCCCAGTATCCAGTGTGC
ACACTGTGCTGTGACAGCTTTTGAAATTTTGCCCTAATTTTATACAATTA
TCGGATTTTGTTCTCCCTCGGGAATATTACGACACGTGTGAAAAGAAGAA
TGTGGTTTTCGGGAAGGCGAGGCGAGCTTTGAGGAGGAGGTGTTTTGGCG
GAGTATGTTTGAAGTATCCCGAATTAAGCCTAGTGTAGTGCATAATGTTC
GCTCGGAAACGTTTGTGCGTTTATTTTACATGAAGGGTATTGTAATGCGC
TTTTTCGGCCTGTGCTGGGTTGCCTGCTCTATTCGTTCTTCGGTCTTCGT
GATTCATGCGTGCATTTCTTGTGTGTTGGGCTTCACTCCGGTGTCTTGAA
TTGATTATTGGAATCTTGTGTCTTTTGGGGGGGGAATTTCCGATGTTCGC
CCTAGGGATCTAGGTCTATGTAAGAATTGATTGTGTTGTACTAGACCACT
TGATGAGGCGTCTCGTTGCTCATCCTTATTTATTTTTTTGTTACGAATGG
GGTGTGTGTGGTTTGATTTTGCCTACTATAGAGACGGTTCCTCTAAATTT
TGCCCAACGAAGGGCAACATCGAGAGCATTTTTAACTCTTTTTGATTGCT
GCTGTTCCTCCTCGACTGCGGAGTTCTTTTTCGAAAAGACTGACTGCAGT
TCGTCTATTTTTGGTAGCTTGTTCAACCGATGAAGAAGTAAGTTCAACGT
AAATTTTGCAGTGAACCAAGTGCTGCACGGAATCGATGTTTCCGTGGCAA
AAGAAAACAGGGTTTCTAATTCGGTTCGTGAATAGTTAGAAGTCCGCGCA
GGCTGTCTATCAGGAGCCTCTGCTGGTTTACACAGATGGGTCTACCTACC
GCTTGCCTACCTGGCTGTACGATGGGTTTTTCCACCCGTCACACAAAATA
TCGGCGTGAGTATTGCAGGTGACCTGAGATCAAGTGCAACGAGTGTTGCG
TGGCAGAAGTCGTCGTTAGGTAGTTTTACCGATATCAGAGTTTCCATTCT
AATCACCTCGTTATTCCTGATATTGGTGTGATGCATAAACGTAGCCGACA
AAACGTTATATACTGGCGGTGCCTACGATTCAAGTGTAGAAAACCAAAAT
AATACTAGATTGCGCTCGAACGAGGCGACCATCTTCACGCCGACGAATTG
TTTTGATTTCCTTGTGTGGTCGACGAGAACGGCCAATTAAACTGACGTTT
TACGAAGGAACAGTATTTATAGGATCGAGTTGTTGCTCCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig5919:1649..12138- >mRNA_H-paniculata_contig5919.13543.1 ID=mRNA_H-paniculata_contig5919.13543.1|Name=mRNA_H-paniculata_contig5919.13543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3168bp|location=Sequence derived from alignment at H-paniculata_contig5919:1649..12138- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGCAAGACAAGACATACCTCCCGATGGTGCAAGACAAGACATACCT
CCCGACAACGGTGCTGAACGATGCTTCAGCAGCCGCTTCGGCTGAGTTTG
CTGGTAGAGACGACGAGGAAACGATAGCGGTGCTCAACAACGGTGCTGAA
CGATGCTTCAGCAGCCGCTTCGGCTGAGTTTGCTGGTAGAGACGACGAGG
AAACGATAGCGGTGCTCACTCTGGGAACAGGCATCGGCTTAGGTGTGGTA
TCTAACGGACGCTTGTTGTCAGGATCAAGGGGGCTGATCGAGGGCGGCCA
CATGCTCTGGGAACAGGCATCGGCTTAGGTGTGGTATCTAACGGACGCTT
GTTGTCAGGATCAAGGGGGCTGATCGAGGGCGGCCACATGATCGTGGATC
CCGGGCCAGACGCACGTCTTTGTAACTGTGGTCAACGCGGTTGCCTCGAA
GCTTACGCGTCCGCGACAGCGGTGGCGAAGATCTTCAGCGAGCGGCGGCG
TGCCAAGGCCTGGCGGCAACCCTCCATTCCCCCCGGCATCCGCCCGAAGT
CATCATTATCATTATCAGCAGCAACAGCAACAGCAGGAGGAGGAGGAGGA
CCAGGAGGCCTCATGGCATGCCCGCTGGAGGATATTGACCCAGTGCTCAC
GAGCAACCAAACCCCGACCCCTTCCAAGTCTGCCCCAATTTTTCCTCGTG
CTGCCTTTTCGAGAGAAGGATCCTCTGGCGTCAAGGATCGTATCCGGGAG
TTGGAGCGCAAGACTAGCATGGAGAAGGAGGTGGCGGCGATGGCGCGGGC
GGAGGCTGCCGCGGTTGTGGCGGGAGGCGTCGCGATTGGGTCTACCGTGC
ACCCCCCGCCGTCCCCTTCTTCCACCCCAGCCTCTCCATCGACGAAGGGG
GGAAACATGACGGCGACGCCGGCCGGCGGACTCTTCGCCCTTGTTCCTCT
GTCCAGCGACGCAAACGGTGGTAGCAGTAACGGCGTGATCGAGAAGAAAA
CAGAAGAAGACGGTTATAGTGGGGTCGCGAAAGGTGTAGGTAGTAACGGT
ATCGCCAATGGTAACGGTACGAAGGTGGGACATACCGGGTTGACGTCGGA
AGACGTGTTTAGAATGGCGGCGGAGGGCGATAGGGTCGCCGTGGGTGTGG
TGAGAGAGGCGTGTGCGTATCTGGGCCTGGCATGTGTCAACGTCTGTCGG
GTTGTGGATCCCGATGTTATTCTGCTCGCCGGGGGTATGTCGCAGGCGGC
TGGACTGGTGGACAAGATCGTGGATCCCGGGCCAGACGCACGTCTTTGTA
ACTGTGGTCAACGCGGTTGCCTCGAAGCTTACGCGTCCGCGACAGCGGTG
GCGAAGATCTTCAGCGAGCGGCGGCGTGCCAAGGCCTGGCGGCAACCCTC
CATTCCCCCCGGCATCCGCCCGAAGTCATCATTATCATTATCAGCAGCAA
CAGCAACAGCAGGAGGAGGAGGAGGACCAGGAGGCCTCATGGCATGCCCG
CTGGAGGATATTGACCCAGTGCTCACGAGCAACCAAACCCCGACCCCTTC
CAAGTCTGCCCCAATTTTTCCTCGTGCTGCCTTTTCGAGAGAAGGATCCT
CTGGCGTCAAGGATCGTATCCGGGAGTTGGAGCGCAAGACTAGCATGGAG
AAGGAGGTGGCGGCGATGGCGCGGGCGGAGGCTGCCGCGGTTGTGGCGGG
AGGCGTCGCGATTGGGTCTACCGTGCACCCCCCGCCGTCCCCTTCTTCCA
CCCCAGCCTCTCCATCGACGAAGGGGGGAAACATGACGGCGACGCCGGCC
GGCGGACTCTTCGCCCTTGTTCCTCTGTCCAGCGACGCAAACGGTGGTAG
CAGTAACGGCGTGATCGAGAAGAAAACAGAAGAAGACGGTTATAGTGGGG
TCGCGAAAGGTGTAGGTAGTAACGGTATCGCCAATGGTAACGGTACGAAG
GTGGGACATACCGGGTTGACGTCGGAAGACGTGTTTAGAATGGCGGCGGA
GGGCGATAGGGTCGCCGTGGGTGTGGTGAGAGAGGCGTGTGCGTATCTGG
GCCTGGCATGTGTCAACGTCTGTCGGGTTGTGGATCCCGATGTTATTCTG
CTCGCCGGGGGTATGTCGCAGGCGGCTGGACTGGTGGACAAGGTCCGCCA
AGAATTCACAGCGCGCGGATGGAATATTCTTCCGCATGAGTGCCACATTG
AGTTGGCGAACGCCTGTGCTCCGTGTTCCTCGGGCGTGGTCGGCGCGGCG
GGGGCGGCGGCCTGCGAACATGCACGCCAGGCTCGCCGCGAGCTACGGAG
ATCGCGAGCATCATCGCGTTGTTCAATGAGAGGAGAGTCCGACGCTGACG
CCAGCCCTTCTAGGGAGCATTCTGTGTTGGACAGCGGCGGCAATAACGAC
AATAGTGTTGACACTAGTAGACAAGAGCAGCAAAGAGGGACGGAGGCTGT
CGGAGTCGTCGGGATCGAAGGAGCGATCTCACAGTCGGGCCGGAGAGGAG
GTTACGCTGGTGGTGCGAAAGAGCGAGGCGATAAGGAAACGAAGGGTAAA
TGGGGGGGGGGAGGGTTCGCTACCGGGTCGGCCGTCGTGGGTGTGGCCGT
TCTGGCTGGTGTGGCTGTTGTGCACGCCCAGCGCGGAGGTCGGGCAGGTA
GGTGAGTCCGCCAAGAATTCACAGCGCGCGGATGGAATATTCTTCCGCAT
GAGTGCCACATTGAGTTGGCGAACGCCTGTGCTCCGTGTTCCTCGGGCGT
GGTCGGCGCGGCGGGGGCGGCGGCCTGCGAACATGCACGCCAGGCTCGCC
GCGAGCTACGGAGATCGCGAGCATCATCGCGTTGTTCAATGAGAGGAGAG
TCCGACGCTGACGCCAGCCCTTCTAGGGAGCATTCTGTGTTGGACAGCGG
CGGCAATAACGACAATAGTGTTGACACTAGTAGACAAGAGCAGCAAAGAG
GGACGGAGGCTGTCGGAGTCGTCGGGATCGAAGGAGCGATCTCACAGTCG
GGCCGGAGAGGAGGTTACGCTGGTGGTGCGAAAGAGCGAGGCGATAAGGA
AACGAAGGGTAAATGGGGGGGGGGAGGGTTCGCTACCGGGTCGGCCGTCG
TGGGTGTGGCCGTTCTGGCTGGTGTGGCTGTTGTGCACGCCCAGCGCGGA
GGTCGGGCAGGTAGGTGA back to top
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