prot_H-paniculata_contig5913.13538.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5913.13538.1
Unique Nameprot_H-paniculata_contig5913.13538.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length336
Homology
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BLAST of mRNA_H-paniculata_contig5913.13538.1 vs. uniprot
Match: D8LU71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU71_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 4.060e-117
Identity = 199/353 (56.37%), Postives = 257/353 (72.80%), Query Frame = 0 
Query:    1 YNLCCKSTHAFKHLFRERVPEAVAGLLEEMRATDNPAHYHPEVEVLCVAILGTLVEDAASVPKLIELRVTLSIVQGLGSRIIEVRLASLWALLLLSVP------ITRTTSSSSQGT------YRCRSWMLFCRQAVIECKVVSSLRTLWEDRAVSLTTEAQKHVQYAISTIVAHFFLDQAAAAAVVRQRGVELLAETMDFPDRGPFYQAMAL--QEESSDDEGSSPICKVSTLCAAVPTVYLPGIP---VQSVFEGVLSVFMKILPTYDDRVRDLCSLAMRCLAEKEDLLIDLIMEPRFTTVLRMLLDDSTSSGRAHIKAVLQRIVVLSAAPDIDDLSPALLDLTDNVFQKTA 336
            YNLCCKS  A K  FR+ +PEAV GLLEEMR   +  +YHP+VE++CVA+L T++E+AA VPKLIE  VT +I QGL SRI+ VRLASLW+LLLL +P       T T + +S G        + R WMLFCR+AV+ECK VS+L TLWE  A +L   A++H++YAIST+   FF+D+ AA+A V+QRG ELLA TMDF        A++L  +++S  DE SS + KVS LC AV TV+LP +P   VQSV EG L VF+K+LPT +  VRDLCSLAMRCL+  E+LL+DL+ +PRFTTVL++LL+++TS G  HI+AVL+R+VVLSA P + DLSPALL+LTD VFQ+ A
Sbjct:  452 YNLCCKSGKATKLFFRKNIPEAVTGLLEEMRKAQDETYYHPQVEIMCVAVLSTMIENAALVPKLIERHVTPAITQGLDSRIVAVRLASLWSLLLLGIPGSGNNDDTTTAAPASAGKDHAGGGTQVRMWMLFCREAVVECKAVSALWTLWESTAATLEAGAREHMRYAISTVTRIFFMDKVAASAAVKQRGAELLALTMDFSADSRAVSALSLVGEDDSDYDETSSALVKVSALCCAVVTVHLPDMPAKAVQSVCEGCLDVFLKVLPTEEHEVRDLCSLAMRCLSGNEELLLDLLSDPRFTTVLKVLLEEATSVGGMHIEAVLKRVVVLSAVPGVADLSPALLNLTDYVFQRRA 804
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5913.13538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU71_ECTSI4.060e-11756.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 40..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5913contigH-paniculata_contig5913:276..6261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5913.13538.1mRNA_H-paniculata_contig5913.13538.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5913 276..6261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5913.13538.1 ID=prot_H-paniculata_contig5913.13538.1|Name=mRNA_H-paniculata_contig5913.13538.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
YNLCCKSTHAFKHLFRERVPEAVAGLLEEMRATDNPAHYHPEVEVLCVAI
LGTLVEDAASVPKLIELRVTLSIVQGLGSRIIEVRLASLWALLLLSVPIT
RTTSSSSQGTYRCRSWMLFCRQAVIECKVVSSLRTLWEDRAVSLTTEAQK
HVQYAISTIVAHFFLDQAAAAAVVRQRGVELLAETMDFPDRGPFYQAMAL
QEESSDDEGSSPICKVSTLCAAVPTVYLPGIPVQSVFEGVLSVFMKILPT
YDDRVRDLCSLAMRCLAEKEDLLIDLIMEPRFTTVLRMLLDDSTSSGRAH
IKAVLQRIVVLSAAPDIDDLSPALLDLTDNVFQKTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold