mRNA_H-paniculata_contig59.13520.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: D8LJN4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN4_ECTSI) HSP 1 Score: 166 bits (419), Expect = 1.230e-44 Identity = 84/88 (95.45%), Postives = 88/88 (100.00%), Query Frame = 3
Query: 45 MSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKV 308
MSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEE+K+EN+ELRSKLQSLTEK+
Sbjct: 1 MSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEFKRENEELRSKLQSLTEKM 88
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: A0A836C913_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C913_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.670e-37 Identity = 72/88 (81.82%), Postives = 83/88 (94.32%), Query Frame = 3
Query: 45 MSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKV 308
M++YQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERP NAVDYIKRYMGAPTGVD EA+RLQNEE K++N+ LRS++Q++ EK+
Sbjct: 1 MASYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPSNAVDYIKRYMGAPTGVDIEAIRLQNEELKRDNELLRSQMQAMNEKL 88
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: A0A485LCE8_9STRA (Aste57867_19307 protein n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LCE8_9STRA) HSP 1 Score: 132 bits (332), Expect = 8.560e-33 Identity = 65/91 (71.43%), Postives = 79/91 (86.81%), Query Frame = 3
Query: 36 VVTMSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKV 308
+ T + YQTP+SKKEEFRKYLEKSGVID+LTKVLVGLYEE ++PPNAVDYIKR+MGAPTGVD EAMRL+NEE KK+N EL ++ L +++
Sbjct: 1 MATATAYQTPDSKKEEFRKYLEKSGVIDSLTKVLVGLYEESDKPPNAVDYIKRFMGAPTGVDVEAMRLENEELKKKNAELTKVIEELNKRL 91
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: A0A7S2C7M0_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7M0_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.910e-32 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 3
Query: 42 TMSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEE 251
+MSNYQTP+SKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVD EAMR +NE+
Sbjct: 20 SMSNYQTPDSKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDVEAMRSENEQ 89
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: G4ZAR7_PHYSP (Uncharacterized protein n=2 Tax=Oomycota TaxID=4762 RepID=G4ZAR7_PHYSP) HSP 1 Score: 127 bits (320), Expect = 2.710e-31 Identity = 60/90 (66.67%), Postives = 78/90 (86.67%), Query Frame = 3
Query: 39 VTMSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKV 308
++ + YQTP+SKKEEFRKYLEKSGV+DALTKVLVGLYEE ++PPNAVDY+KR+MGAPTG+D +A+R +NEE KK+N EL ++ L ++V
Sbjct: 1 MSAATYQTPDSKKEEFRKYLEKSGVVDALTKVLVGLYEEADKPPNAVDYVKRFMGAPTGIDVDALRAENEELKKKNAELIKTIEELNKRV 90
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: A0A8J2SGQ9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGQ9_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.180e-31 Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 3
Query: 54 YQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKE 263
YQTP+SKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTG+D +A+R +NE+ KKE
Sbjct: 3 YQTPDSKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGIDVDALRQENEDLKKE 72
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: A0A0W8DQZ1_PHYNI (c-Myc-binding protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DQZ1_PHYNI) HSP 1 Score: 127 bits (318), Expect = 1.300e-30 Identity = 60/90 (66.67%), Postives = 78/90 (86.67%), Query Frame = 3
Query: 39 VTMSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKV 308
++ + YQTP+SKKEEFRKYLEKSGV+DALTKVLVGLYEE ++PPNAVDY+KR+MGAPTG+D +A+R +NEE KK+N EL ++ L ++V
Sbjct: 1 MSTAAYQTPDSKKEEFRKYLEKSGVVDALTKVLVGLYEEADKPPNAVDYVKRFMGAPTGIDVDALRAENEELKKKNAELIKTIEELNKRV 90
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: F0XYG0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYG0_AURAN) HSP 1 Score: 124 bits (310), Expect = 6.840e-30 Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 3
Query: 54 YQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNE 248
YQTP+SKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTG+D EA+R +NE
Sbjct: 3 YQTPDSKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGIDVEALRQENE 67
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: K3WP52_GLOUD (Uncharacterized protein n=7 Tax=Oomycota TaxID=4762 RepID=K3WP52_GLOUD) HSP 1 Score: 124 bits (310), Expect = 7.960e-30 Identity = 60/95 (63.16%), Postives = 78/95 (82.11%), Query Frame = 3
Query: 36 VVTMSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKVLKRD 320
+ + + YQTP+SKKEEFRKYLEKSGV+DALTKVLVGLYEE ++P NAVDYIKR+MGAPTG+D +A+R +NEE KK+N EL ++ L +++ D
Sbjct: 1 MSSAATYQTPDSKKEEFRKYLEKSGVVDALTKVLVGLYEEGDKPSNAVDYIKRFMGAPTGIDIDALRAENEELKKKNAELIKTIEELNKRLTTED 95
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Match: A0A3R7EKQ2_9STRA (Non-specific serine/threonine protein kinase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EKQ2_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.170e-28 Identity = 66/93 (70.97%), Postives = 80/93 (86.02%), Query Frame = 3
Query: 30 HFVVTMSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRYMGAPTGVDAEAMRLQNEEYKKENDELRSKLQSLTEKV 308
H + T + YQTP+SKKEEFRKYLEKSGVID+LTKVLVGLYEE ++PPNAVDYIKR+MGAPTGVD EAMRL+NEE KK+N EL ++ L +++
Sbjct: 1152 HRMATPAAYQTPDSKKEEFRKYLEKSGVIDSLTKVLVGLYEESDKPPNAVDYIKRFMGAPTGVDVEAMRLENEELKKKNAELTKVIEELNKRL 1244 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59.13520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig59.13520.1 >prot_H-paniculata_contig59.13520.1 ID=prot_H-paniculata_contig59.13520.1|Name=mRNA_H-paniculata_contig59.13520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp MSNYQTPESKKEEFRKYLEKSGVIDALTKVLVGLYEEPERPPNAVDYIKRback to top mRNA from alignment at H-paniculata_contig59:1477..9319+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig59.13520.1 ID=mRNA_H-paniculata_contig59.13520.1|Name=mRNA_H-paniculata_contig59.13520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7843bp|location=Sequence derived from alignment at H-paniculata_contig59:1477..9319+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig59:1477..9319+ >mRNA_H-paniculata_contig59.13520.1 ID=mRNA_H-paniculata_contig59.13520.1|Name=mRNA_H-paniculata_contig59.13520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at H-paniculata_contig59:1477..9319+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |