prot_H-paniculata_contig5887.13509.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5887.13509.1
Unique Nameprot_H-paniculata_contig5887.13509.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
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BLAST of mRNA_H-paniculata_contig5887.13509.1 vs. uniprot
Match: A0A6H5JK35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK35_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 5.760e-33
Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 0 
Query:   80 ELSEDNISLSADISAVRVHQLAVTLRPLPVGAGGAAGAGSRPKMSASRWEVRKAMLSLCSTQPVMFEIDVTDKSASIRISFSVRAAAEELARKLSGVTVKIKGLKLHSFVR-VSECA 195
            E  ++ I LS D +AV++HQLA+TLRPL  G     G+G RP ++ASRWEVRKA++SLC +QP MFEI+ TDKSASIR++FS  A A+ L+R L GV+VKIKG+KLH+FVR VSE A
Sbjct:   41 EWDKERIVLSNDFTAVKLHQLAITLRPLTTG-----GSGGRPMLTASRWEVRKAIMSLCRSQPTMFEIEATDKSASIRVAFSAAADADALSRSLRGVSVKIKGVKLHAFVREVSESA 152
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BLAST of mRNA_H-paniculata_contig5887.13509.1 vs. uniprot
Match: D8LP18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP18_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.320e-32
Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 0 
Query:   83 EDNISLSADISAVRVHQLAVTLRPLPVGAGGAAGAGSRPKMSASRWEVRKAMLSLCSTQPVMFEIDVTDKSASIRISFSVRAAAEELARKLSGVTVKIKGLKLHSFVR-VSECA 195
            ++ I LS D +AV++HQLA+TLRPL  G     G+G RP ++ASRWEVRKA++SLC +QP MFEI+ TDKSASIR++FS  A A+ L+R L GVTVKIKG+KLH+FVR VSE A
Sbjct:   44 KERIVLSDDFTAVKLHQLAITLRPLTTG-----GSGGRPMLTASRWEVRKAIMSLCRSQPTMFEIEATDKSASIRVAFSAAADADALSRSLRGVTVKIKGVKLHAFVREVSESA 152
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5887.13509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK35_9PHAE5.760e-3360.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP18_ECTSI1.320e-3262.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5887contigH-paniculata_contig5887:1687..3429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5887.13509.1mRNA_H-paniculata_contig5887.13509.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5887 1242..3527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5887.13509.1 ID=prot_H-paniculata_contig5887.13509.1|Name=mRNA_H-paniculata_contig5887.13509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MAHMNLAFKRALADVSKDTAARKSSNSTTNTISATVPPAPDSAAAATPDD
VRQQKRLRRSGCTASSSSVSQPPAILSDIELSEDNISLSADISAVRVHQL
AVTLRPLPVGAGGAAGAGSRPKMSASRWEVRKAMLSLCSTQPVMFEIDVT
DKSASIRISFSVRAAAEELARKLSGVTVKIKGLKLHSFVRVSECARYVID
LSTLFVHCCAQMTLIWPTDLLYC*
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