prot_H-paniculata_contig5880.13500.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5880.13500.1
Unique Nameprot_H-paniculata_contig5880.13500.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
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BLAST of mRNA_H-paniculata_contig5880.13500.1 vs. uniprot
Match: A0A6H5KYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX7_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 3.940e-25
Identity = 54/91 (59.34%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:    1 MGNTAAAADQEERSSLVRKLFERLGACNGGQATGALLAGLVRQPVPETRHAAYDVLRCTMWQPGGWGLLVMFSQPGFREFLEDRGMEASKV 91
            MGNTAAA   +ERS+L   LF RL   N  Q  G  L  L RQPV E RHAAY V+RC  WQPGGWGL  + SQPGF EFLE R   ASK 
Sbjct:  425 MGNTAAAEAAKERSTLCLMLFTRLSESNTNQRAGGWLLDLARQPVSEVRHAAYAVMRCAAWQPGGWGLSALLSQPGFLEFLEKRDTAASKA 515
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BLAST of mRNA_H-paniculata_contig5880.13500.1 vs. uniprot
Match: A0A7S4DGG8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGG8_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 1.230e-8
Identity = 36/68 (52.94%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   25 GACNGGQATGALLAGLVRQPVPETRHAAYDVLRCTMWQ-PGGWGLLVMFSQPGFREFLEDRGMEASKV 91
            GA  GG  T A L GL RQPVPE RHAA DVLR    Q PGGWG+L + + PG    L  R    SK+
Sbjct:    3 GAPGGG--TPAFLLGLARQPVPELRHAALDVLRAAAGQRPGGWGVLAV-ADPGVVALLRRRDALNSKL 67
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5880.13500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYX7_9PHAE3.940e-2559.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DGG8_HETAK1.230e-852.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR01953826S proteasome non-ATPase regulatory subunit 5PFAMPF10508Proteasom_PSMBcoord: 10..90
e-value: 2.2E-7
score: 29.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5880contigH-paniculata_contig5880:11485..12441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5880.13500.1mRNA_H-paniculata_contig5880.13500.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5880 11485..12441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5880.13500.1 ID=prot_H-paniculata_contig5880.13500.1|Name=mRNA_H-paniculata_contig5880.13500.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MGNTAAAADQEERSSLVRKLFERLGACNGGQATGALLAGLVRQPVPETRH
AAYDVLRCTMWQPGGWGLLVMFSQPGFREFLEDRGMEASKVKGDGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019538PSMD5