mRNA_H-paniculata_contig5880.13499.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S2SK93_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK93_9STRA) HSP 1 Score: 236 bits (601), Expect = 2.310e-73 Identity = 133/229 (58.08%), Postives = 148/229 (64.63%), Query Frame = 1
Query: 4 AACHVCEGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEA-RAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLASSSD 687
A CH C GG ARNHCPNRTVLGIL K GTYA++LTLP NLHVVP++V+ A A F EPLAAACRI+EQGL P R AVLGDGKLGLLIAEV+ R S E T + GRH EKM L E E A+ G +DVV+DATGSP GL A LCRP+GT+VLKSTCAAG FN AP VI+E RV+GSRCGPF AL LL S D
Sbjct: 104 ATCHTCGCGGVRARNHCPNRTVLGILNKDGTYAQYLTLPVTNLHVVPESVSTANAAFVEPLAAACRIVEQGLIDPTTDRVAVLGDGKLGLLIAEVVGRHVHGGASSTEEPSSPCTVLFGRHPEKMALVSQ---------EAHVAVHSSEDALPTHGGQYDVVIDATGSPQGLDLAQKLCRPLGTLVLKSTCAAGTDFNTAPFVIDELRVIGSRCGPFPEALALLESGLD 323
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S1Y2C0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2C0_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.860e-71 Identity = 132/244 (54.10%), Postives = 165/244 (67.62%), Query Frame = 1
Query: 1 CAACHVCEGGGD-----LARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEA--RAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRV--DAGDESA----VTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLASSSDDV 693
C +C VC+G D ++RNHCPNRTVLGIL ++GT AE+LTLP +NLH+VPD+++D A+F+EPLAAACRI+EQGL E+ + A+LGDGKLGL+IAEV+ R S + E P + G+H K+ L E G +T++ D D+SA A A A+DVVVDATG+P L A LCRPMGTVVLKSTCAAG FN AP VI+E RV+GSRCGP + ALELLA DD
Sbjct: 127 CFSCRVCQGSRDSCCSQMSRNHCPNRTVLGILNRNGTMAEYLTLPVQNLHLVPDHISDEDAVFSEPLAAACRIVEQGLVSIESSDKVAILGDGKLGLMIAEVMGREYLSVKGTAEAPEP--PILFGKHDHKLKL-------VENSGVITKMVSDCQDDSAFNGVAAAHAAAYDVVVDATGNPAALLLAAGLCRPMGTVVLKSTCAAGEQFNAAPFVIDELRVIGSRCGPIDKALELLALQEDDA 361
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S1AD40_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AD40_NOCSC) HSP 1 Score: 228 bits (580), Expect = 3.080e-70 Identity = 128/231 (55.41%), Postives = 156/231 (67.53%), Query Frame = 1
Query: 1 CAACHVCEGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEARAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLASSSDDV 693
C +C +C GG LARNHC R+VLGIL GTYAEFLTLP NLHVVPD +++ AA+F EPLAAA R++EQGL PE R V GDGKLGLL+AEVLAR+ S ++GRH +KM L LGD E + + D S V +AG+FDVVV+ATG+PLGL SA +L PMGTVVLKSTCA+ A + +P+V+ E +VVGSRCGPF A+ LL S DV
Sbjct: 95 CNSCGICSRGGSLARNHCLRRSVLGILNHDGTYAEFLTLPVSNLHVVPDGISNEAAVFVEPLAAAFRVVEQGLVQPEHRVCVQGDGKLGLLVAEVLARQGLSP----------KPVLLGRHADKMAL----LGDLVQAREASSPEESD-SLVAELAGSFDVVVEATGTPLGLTSAASLVLPMGTVVLKSTCASPATIDTSPLVVRELKVVGSRCGPFPEAVTLLNSGDLDV 310
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S0Q5J9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5J9_9EUKA) HSP 1 Score: 224 bits (571), Expect = 7.390e-69 Identity = 136/228 (59.65%), Postives = 155/228 (67.98%), Query Frame = 1
Query: 4 AACHVCEGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEARAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLASSSD 687
A C C GG ARNHCP RTVLGIL K GTYA++LTLP RNLHVVPD+VT A FAEPLAAA RI+EQGL R AV+GDGKLGLLI+EVL R AA+ RP + GRH KM L +G A EL+ V+A E+A AFD+VVDATGSP GL + +CRPMGTVVLKSTCAA FN AP VI+E RV+GSRCGPF+ AL+LLA D
Sbjct: 112 ATCSTCACGGARARNHCPTRTVLGILRKDGTYAQYLTLPARNLHVVPDSVTTENAAFAEPLAAAFRIVEQGLVRATDRVAVIGDGKLGLLISEVLGRHAAAA----GGPRP---VLFGRHDSKMRLLSSG---ANVDTELS-VNALPENAA-----AFDLVVDATGSPAGLDLSREICRPMGTVVLKSTCAASKDFNTAPFVIDELRVMGSRCGPFKPALQLLAEGLD 323
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A1E7FAK7_9STRA (GroES-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAK7_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.480e-67 Identity = 130/250 (52.00%), Postives = 170/250 (68.00%), Query Frame = 1
Query: 1 CAACHVC---------EGGGDL-ARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLA---PPEARAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAM----AGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLASSSDDVID 699
C++C+VC +G + +RNHCP R+VLGIL ++GT AE+LTLP NLH VP +V+D A+FAEPLAAACRI+EQGL PP+ + A+LGDGKLGL+IAEVL R ++ + + +P + G+H+ K+ L + ++ G + D DE A + AG FDVVVDATGSP GL+ A LCRPMGT+VLKSTCAAG FN AP VI+E RVVGSRCGP + AL+LLA ++D+ ID
Sbjct: 71 CSSCNVCLNFPHDRNVKGNCPMMSRNHCPTRSVLGILNRNGTIAEYLTLPVSNLHEVPSHVSDEVAVFAEPLAAACRIVEQGLVRVIPPD-KVAILGDGKLGLMIAEVLGREHSTRLGCSKYPKP---ILFGKHKHKLDL----VRESAGVDCRSVSDCKDEKAFNGVSAEYAGQFDVVVDATGSPAGLSLASGLCRPMGTLVLKSTCAAGEKFNAAPFVIDELRVVGSRCGPIDKALDLLAITNDNKID 312
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A0M0JNU1_9EUKA (L-threonine 3-dehydrogenase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNU1_9EUKA) HSP 1 Score: 220 bits (560), Expect = 2.240e-67 Identity = 126/227 (55.51%), Postives = 147/227 (64.76%), Query Frame = 1
Query: 7 ACHVCEGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEARAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLASSSD 687
+C C G D ARNHCP RTVLGIL K GTY E +TLP +NLHVVPD+V+ A FAEPLAAA RI+EQ L P + AV+GDGKLG+LIAEVL R A R +GRH EKM L A + + + A +FDVVVDATGSP GL A ALCRP+GT+VLKSTCAAGA FN AP V++E +++GSRCGPF ALELLAS D
Sbjct: 92 SCFTCACGWDRARNHCPVRTVLGILNKDGTYQERITLPAKNLHVVPDHVSSENAAFAEPLAAAFRIVEQKLVAPTDKVAVVGDGKLGVLIAEVLGR--AQVAAGGPR-----VVFVGRHPEKMALVSAAAAVEP---------VASDGVLPSGASSFDVVVDATGSPAGLDLARALCRPLGTLVLKSTCAAGANFNTAPFVVDELKIIGSRCGPFPPALELLASGLD 302
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S4HX77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HX77_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.420e-65 Identity = 138/261 (52.87%), Postives = 161/261 (61.69%), Query Frame = 1
Query: 1 CAACHVCEGGGDL---------ARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAP-------------------PEARAAVLGDGKLGLLIAEVLAR----RAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAM----AGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLA 675
CA+CHVC L +RNHCPNRTVLGIL +GT AE+LTLP NLHVVPD V+D A+FAEPLAAACRI+EQ L P+ R A+LGDGKLGL+IAEVL R R AS+V ++ P S + G+HR KM L DA E A DES+ + + A +DVVVDATGSP GL A LCRPMGT+VLKSTCA G FN AP VI+E RVVGSRCGP + ALELL+
Sbjct: 123 CASCHVCTNDDRLDDMPECSMMSRNHCPNRTVLGILNHNGTMAEYLTLPVSNLHVVPDGVSDEEAVFAEPLAAACRIVEQNLVRYADDGDRGKGEGSAGKWRRPD-RVAILGDGKLGLMIAEVLGREHVARNASSV-AEGGDAPPSPVLFGKHRHKMDLVAGSGVDARFVSE-----AKDESSFSGVHANHAAKYDVVVDATGSPNGLKLAAGLCRPMGTLVLKSTCADGEKFNAAPFVIDELRVVGSRCGPIDRALELLS 376
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S4EC03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EC03_9STRA) HSP 1 Score: 212 bits (539), Expect = 4.400e-64 Identity = 124/224 (55.36%), Postives = 144/224 (64.29%), Query Frame = 1
Query: 1 CAACHVCEGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEARAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRVDAGDESAVTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELL 672
C C +CE GG ARNHCP RTVLGIL K+GTY E LTLP RNLHVVPD V A FAEPLAAA R++EQ L P + + A++GDGKLGLLI EVL R A +R+ + GRH KM L + E A ++A+ A A+DVVVDATGSP GL + LCR GT+VLKSTCAAG FN AP V++E RV GSRCGPF ALELL
Sbjct: 108 CNTCMLCERGGPRARNHCPKRTVLGILNKNGTYQERLTLPARNLHVVPDCVKTENAAFAEPLAAAFRVVEQNLVPAKTKIAIVGDGKLGLLIGEVLGRHA-------QRTGSPRPVLYGRHVSKMKLLSS---------ESQCDTALSDTALPKNAYAYDVVVDATGSPAGLDLSRQLCRTEGTLVLKSTCAAGTDFNTAPFVVDELRVQGSRCGPFGPALELL 315
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A1Z5KM79_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM79_FISSO) HSP 1 Score: 211 bits (537), Expect = 1.290e-63 Identity = 131/247 (53.04%), Postives = 164/247 (66.40%), Query Frame = 1
Query: 1 CAACHVCEGGGD-----LARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLA----PPEARAAVLGDGKLGLLIAEVLARRAASTVFSDERSRPGSTTIIGRHREKMVLCCAGLGDAEGRGELTRV--DAGDESAVT----AMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAG--FNPAPIVINEQRVVGSRCGPFEAALELLASSSDD 690
CAAC VC+ D ++RNHCPNR+VLGILG++G+ AE+LTLP RNLH VPD++ D A+F+EPLAAACRI+EQGL PP+ + A+LGDGKLGL+IAEVL R V + + + G+H K+ L + DA G +T++ + D SA A AG FDVVVDATGSP LA + ALCRPMGT+VLKSTCA+ FN AP VI+E +VVGSRCGP + AL LLA D
Sbjct: 92 CAACGVCDKQYDHRCSQMSRNHCPNRSVLGILGRNGSMAEYLTLPVRNLHPVPDDMPDEVAVFSEPLAAACRIVEQGLVSYNDPPD-KVAILGDGKLGLMIAEVLGREHTERVGN----ALDAPVLFGKHEHKLQL----VSDA---GVITKLIKECQDSSAFNGVSPAYAGKFDVVVDATGSPDALALSAALCRPMGTLVLKSTCASTPEKPFNSAPFVIDELKVVGSRCGPIDRALALLAIPDSD 326
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Match: A0A7S1D6F2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6F2_CYCTE) HSP 1 Score: 211 bits (538), Expect = 1.490e-63 Identity = 130/246 (52.85%), Postives = 155/246 (63.01%), Query Frame = 1
Query: 1 CAACHVC-------EGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNVTDAAALFAEPLAAACRILEQGLAPPEA----RAAVLGDGKLGLLIAEVLARRAA---STVFSDERSRPGSTTII-GRHREKMVLC------CAGLGDAEGRGELTRVDAGDESAVTAMAGAFDVVVDATGSPLGLASACALCRPMGTVVLKSTCAAGAGFNPAPIVINEQRVVGSRCGPFEAALELLA 675
CA C VC E ++RNHCPNRTVLGIL ++GT AE+LTLP NLHVVPD+V D A+FAEPLAAACRI EQ L A + A+LGDGKLGL+IAEVL R +T +D P ++ G+H+ K+ L C + + + V AG A +DVVVDATGSP GL+ A LCRPMGT+VLKSTCAAG FN AP VI+E +VVGSRCGP E ALELLA
Sbjct: 99 CADCSVCFNAERLDERCCKMSRNHCPNRTVLGILKRNGTMAEYLTLPVSNLHVVPDDVPDEEAVFAEPLAAACRIPEQNLVYYNAQRPDKVAILGDGKLGLMIAEVLGREHTKHFATAANDASPPPPPRPVLFGKHQHKLDLVKDSGVVCKHVSECKDEKAFNGVAAGH-------AAQYDVVVDATGSPAGLSLAAGLCRPMGTLVLKSTCAAGEQFNAAPFVIDELKVVGSRCGPIEKALELLA 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5880.13499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5880.13499.1 >prot_H-paniculata_contig5880.13499.1 ID=prot_H-paniculata_contig5880.13499.1|Name=mRNA_H-paniculata_contig5880.13499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp CAACHVCEGGGDLARNHCPNRTVLGILGKHGTYAEFLTLPCRNLHVVPDNback to top mRNA from alignment at H-paniculata_contig5880:1451..3598+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5880.13499.1 ID=mRNA_H-paniculata_contig5880.13499.1|Name=mRNA_H-paniculata_contig5880.13499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2148bp|location=Sequence derived from alignment at H-paniculata_contig5880:1451..3598+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5880:1451..3598+ >mRNA_H-paniculata_contig5880.13499.1 ID=mRNA_H-paniculata_contig5880.13499.1|Name=mRNA_H-paniculata_contig5880.13499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig5880:1451..3598+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |