mRNA_H-paniculata_contig588.13498.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig588.13498.1
Unique NamemRNA_H-paniculata_contig588.13498.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA)

HSP 1 Score: 154 bits (390), Expect = 1.130e-42
Identity = 91/206 (44.17%), Postives = 127/206 (61.65%), Query Frame = 1
Query:    7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
            IVGS MY +T  R +I YA  L +R ME P        KR+FRYL    DLG+ F  K NG  L GF D+N+A D++D++ST+G+VF +  GAIS  S+KQQ+VT S+TEAE+IAA  +  + ++L  +L  + F  +G T +  D  S I LS+    H  S++I VR+H +R+ V E I+ L Y ++ DQ+ADIL K L    F
Sbjct:   86 IVGSLMYLTTT-RPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGV-FYKKINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNPILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTKPLKLEAF 289          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 158 bits (399), Expect = 2.450e-42
Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 1
Query:    7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-GLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKFR 627
            IVGS MY  T  R ++ +   L +R M +P     +T KRI RYL    D GI +  +  G   L G+ D+++A D++D KST+GYVF L GGA++  SRKQ +VT SSTEAEY+AA     + ++++ +LG IGF      TLF D  S I LSK +  H  S++I+VR+H +RE  +EG++ L +  T +QLADI+ K L    F+
Sbjct:  273 IVGSLMYL-TATRPDLMFVVCLISRFMANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQ 479          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F)

HSP 1 Score: 152 bits (383), Expect = 2.760e-42
Identity = 80/205 (39.02%), Postives = 128/205 (62.44%), Query Frame = 1
Query:   10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
            VGS +Y STR R +IA+A    A    DP ++ ++  KRI RYL+  + LG+ +  K+      G+ DA+WA D++D+KS +GY+FK+ G A+S  S+KQ  V  S+ EAEY+A   A +E V++  LL  +     G+T ++ED +SAI +++    H  +++I ++ H IR+ V  G + LK  +T D +AD+L KGL+++KF
Sbjct:   31 VGSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLY-SKNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKF 234          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 155 bits (391), Expect = 4.200e-42
Identity = 85/201 (42.29%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGL 609
            +VGS  Y  T  R ++ Y+ +L +R ME+P  +     KRI RY+      GI +  +  G  L GFVD+++A DV+D+KST+GYVF L GGA+S  S+KQ +VT S+TEAE++AA     + ++L  +LG IG+     TTLF D  S I LSK    H  S++I VR++ +R+ V E ++ LK+  T DQL+DI+ K +
Sbjct:  159 LVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRY-KQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAV 357          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A1X7UZ54_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZ54_AMPQE)

HSP 1 Score: 151 bits (382), Expect = 5.400e-42
Identity = 82/208 (39.42%), Postives = 126/208 (60.58%), Query Frame = 1
Query:   10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGST---TLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
            VGS +Y S + R +I +A  LAAR   +P  +  +  KRIFRYL    + G+ F  K N   + GF DA+W  DV D KST+GY+F++ G A++  S+KQ  V  S+ EAEY+A   A +E  +L+ L   +    +GST    ++ED +SAI+++K    H   ++I +++H IR+ VR+ I+ L Y +T + +AD+L K L R+KF
Sbjct:   36 VGSLLYLSMKTRPDITFAVGLAARFSSNPTSQHLTAVKRIFRYLRKTTNYGLLF-RKRNSKSITGFSDADWGGDVTDCKSTSGYIFQIGGTAVTWQSKKQSCVALSTAEAEYVALSSAAQEATWLKQLNQDL----QGSTDPIVIYEDNQSAISIAKNPQFHGRVKHINIKYHFIRDQVRDNIIKLVYCETSEMIADMLTKALGRIKF 238          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203)

HSP 1 Score: 151 bits (381), Expect = 7.840e-42
Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 1
Query:    1 RGIVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
            R IVGS +  STR R ++A+A    AR  + P  E +   K I RYL   ++LG+ +  KSN   L GF D++WA D +D+KST+GY+F    G IS  S+KQ+ V  S+ +AEY+A   A +E +++  LL  I   C   T +FED +S I+L+K    H  +++I +R+H  RE V    + L Y Q+ D +AD+L KGLS++KF
Sbjct:   38 RSIVGSLINLSTRTRPDLAFAVGELARYCDAPGSEHWVALKIILRYLKNTKNLGLCY-RKSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKF 244          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 160 bits (405), Expect = 9.170e-42
Identity = 89/204 (43.63%), Postives = 119/204 (58.33%), Query Frame = 1
Query:   10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK 621
            VGS MYA    R +IAYA  L ++    P  E ++   R F+YL    D  + + GK     L G+VD++WA D  D++S +GYVF L G AIS  S+KQQ V  SSTEAEY+AA  A KE V+L  LL  +       T L  D + AI L+K    H  +++I VR H +R+ V +G +A +Y  T DQ+AD+L KGLSR K
Sbjct: 1191 VGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREK 1394          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A139WJX6_TRICA (Copia protein-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WJX6_TRICA)

HSP 1 Score: 157 bits (398), Expect = 2.300e-41
Identity = 84/208 (40.38%), Postives = 128/208 (61.54%), Query Frame = 1
Query:    1 RGIVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
            R  +G  M+A+   R +I YA ++ +R   +P     +  KRIF+YL   ++LGI +   +N   L G+ DA++A D++ +KST+G+VFKL  GAI+ CSR+Q+ ++ S+TEAEY+AA +A KE V++ GLL  +G  C G   L  D +SAI L K    H  +++I VR+H +RE    G + LKY  + +Q+AD+  K L   KF
Sbjct:  426 REAIGCLMFAAISARPDIMYAVNVVSRYQNNPTIAHVNAVKRIFKYLKGTKELGILY---NNSGKLIGYSDADYANDIDSRKSTSGFVFKLGDGAITWCSRRQRCISLSTTEAEYVAASEATKEAVWISGLLSEVGEKC-GGVALCVDNQSAIKLVKNPMFHKRTKHIDVRYHFVREKYENGDIVLKYVPSTEQVADVFTKALCYAKF 629          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI0018A876E3 (secreted RxLR effector protein 161-like n=2 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A876E3)

HSP 1 Score: 149 bits (377), Expect = 3.200e-41
Identity = 85/205 (41.46%), Postives = 121/205 (59.02%), Query Frame = 1
Query:   10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFE-DKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK 621
            +GS MYA+   R ++++A    AR   +P +  +   KRI RYL    +  + F    N H +EG  DA+WA D++D+KST+GYVFK  GG IS  S+KQQ    S+TEAEY+A   AG+E ++L  L   +G   R S+ + + D KSAINLS  S  H  S++I +R H IR  V +  + ++Y  T D  AD+L K L+ LK
Sbjct:   41 IGSIMYAAQVSRPDVSFAVGALARYNNNPGKAHWQAVKRIMRYLKGTINYKLQFSKDENAH-IEGISDADWAGDLDDRKSTSGYVFKFQGGCISWNSKKQQTTALSTTEAEYMALAAAGQEALWLRSLFNELG---RSSSIVIKCDYKSAINLSHNSTYHARSKHIDIRHHFIRNLVNDKKVVIEYLNTEDMAADVLTKSLTSLK 241          
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A6A4N597_LUPAL (Putative RNA-directed DNA polymerase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4N597_LUPAL)

HSP 1 Score: 150 bits (379), Expect = 3.320e-41
Identity = 89/207 (43.00%), Postives = 124/207 (59.90%), Query Frame = 1
Query:    7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKFR 627
            IVGS MY +T  R +I YA  L +R ME P        KR+FRYL    D GI F  KS G  L GF D+++A DV+D++ST+G+VF +   AISL S+KQQ+VT S+TEAE+IAA  +  + ++L  +L  + F   G T +  D  S I LS+    H  S+ I VR+H +R+ V +  + L Y ++ DQ+ADIL K L    F+
Sbjct:   72 IVGSLMYLTTT-RPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDFGI-FYKKSEGPILTGFTDSDYAGDVDDRRSTSGHVFMMGSSAISLASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEDLHFYQHGPTVIHCDNSSTIKLSRNPILHGRSKRIDVRYHFLRDLVTDKTIDLVYCRSEDQVADILTKPLKAEAFK 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151SR20_CAJCA1.130e-4244.17Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3D358_NOCCA2.450e-4242.79Retrovirus-related Pol polyprotein from transposon... [more]
UPI001C093D0F2.760e-4239.02LOW QUALITY PROTEIN: secreted RxLR effector protei... [more]
A0A6D2JBX5_9BRAS4.200e-4242.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1X7UZ54_AMPQE5.400e-4239.42Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
UPI001AE8F2037.840e-4240.87secreted RxLR effector protein 161-like n=1 Tax=Le... [more]
A0A4Y9ZJA2_9AGAM9.170e-4243.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A139WJX6_TRICA2.300e-4140.38Copia protein-like Protein n=1 Tax=Tribolium casta... [more]
UPI0018A876E33.200e-4141.46secreted RxLR effector protein 161-like n=2 Tax=Lu... [more]
A0A6A4N597_LUPAL3.320e-4143.00Putative RNA-directed DNA polymerase n=1 Tax=Lupin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig588contigH-paniculata_contig588:22872..23504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score145.2
Seed ortholog evalue3.3e-32
Seed eggNOG ortholog7029.ACYPI24114-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,3SQRW@50557,41WYJ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons1
Model size633
Cds size612
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930641.6291492-UTR-H-paniculata_contig588:22871..228921622930641.6291492-UTR-H-paniculata_contig588:22871..22892Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig588 22872..22892 +
1691481385.5336027-UTR-H-paniculata_contig588:22871..228921691481385.5336027-UTR-H-paniculata_contig588:22871..22892Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig588 22872..22892 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930641.6520529-CDS-H-paniculata_contig588:22892..235041622930641.6520529-CDS-H-paniculata_contig588:22892..23504Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig588 22893..23504 +
1691481385.546504-CDS-H-paniculata_contig588:22892..235041691481385.546504-CDS-H-paniculata_contig588:22892..23504Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig588 22893..23504 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig588.13498.1prot_H-paniculata_contig588.13498.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig588 22893..23504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig588.13498.1

>prot_H-paniculata_contig588.13498.1 ID=prot_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITF
GGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVT
WSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSK
GSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK
FRD*
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mRNA from alignment at H-paniculata_contig588:22872..23504+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig588.13498.1 ID=mRNA_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=633bp|location=Sequence derived from alignment at H-paniculata_contig588:22872..23504+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAGGCATAGTAGGATCATTCATGTACGCCTCGACACGAATTAGATCTGA GATAGCATACGCGGGACACCTAGCAGCACGTCGTATGGAGGACCCATGTC GGGAAGACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGCACTGTG CGTGACCTCGGCATTACGTTCGGCGGTAAGAGTAATGGTCACGGTCTGGA AGGATTCGTTGATGCCAATTGGGCGGAAGATGTCGAGGACCAGAAGTCCA CAACAGGGTACGTATTCAAGCTGTACGGTGGTGCAATAAGTTTGTGCTCT AGGAAGCAACAGTTAGTCACGTGGTCCAGTACAGAGGCAGAATACATTGC TGCAGGACAAGCGGGAAAGGAGACGGTGTATCTTGAGGGTTTACTAGGAC CGATAGGTTTCGGATGTAGGGGGAGCACAACATTGTTTGAGGACAAGAAG TCAGCTATTAATCTCAGTAAGGGATCTGGCGCACACTGCACGTCAAGAAA CATCAAAGTGCGCTGGCACGAAATTCGAGAGTGGGTTCGGGAAGGAATAT TGGCTTTGAAATACGCCCAGACCGGCGACCAACTTGCTGACATTTTAGCG AAAGGACTGAGCAGATTAAAGTTTCGAGACTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig588:22872..23504+

>mRNA_H-paniculata_contig588.13498.1 ID=mRNA_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig588:22872..23504+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACGCCTCGACACGAATTAGATCTGAGATAGCATACGCGGGACACCT
AGCAGCACGTCGTATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCA
AGCGCATTTTTCGTTATCTCAGCACTGTGCGTGACCTCGGCATTACGTTC
GGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGCCAATTG
GGCGGAAGATGTCGAGGACCAGAAGTCCACAACAGGGTACGTATTCAAGC
TGTACGGTGGTGCAATAAGTTTGTGCTCTAGGAAGCAACAGTTAGTCACG
TGGTCCAGTACAGAGGCAGAATACATTGCTGCAGGACAAGCGGGAAAGGA
GACGGTGTATCTTGAGGGTTTACTAGGACCGATAGGTTTCGGATGTAGGG
GGAGCACAACATTGTTTGAGGACAAGAAGTCAGCTATTAATCTCAGTAAG
GGATCTGGCGCACACTGCACGTCAAGAAACATCAAAGTGCGCTGGCACGA
AATTCGAGAGTGGGTTCGGGAAGGAATATTGGCTTTGAAATACGCCCAGA
CCGGCGACCAACTTGCTGACATTTTAGCGAAAGGACTGAGCAGATTAAAG
TTTCGAGACTGAATGTACGCCTCGACACGAATTAGATCTGAGATAGCATA
CGCGGGACACCTAGCAGCACGTCGTATGGAGGACCCATGTCGGGAAGACT
TCAGTACATGCAAGCGCATTTTTCGTTATCTCAGCACTGTGCGTGACCTC
GGCATTACGTTCGGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGT
TGATGCCAATTGGGCGGAAGATGTCGAGGACCAGAAGTCCACAACAGGGT
ACGTATTCAAGCTGTACGGTGGTGCAATAAGTTTGTGCTCTAGGAAGCAA
CAGTTAGTCACGTGGTCCAGTACAGAGGCAGAATACATTGCTGCAGGACA
AGCGGGAAAGGAGACGGTGTATCTTGAGGGTTTACTAGGACCGATAGGTT
TCGGATGTAGGGGGAGCACAACATTGTTTGAGGACAAGAAGTCAGCTATT
AATCTCAGTAAGGGATCTGGCGCACACTGCACGTCAAGAAACATCAAAGT
GCGCTGGCACGAAATTCGAGAGTGGGTTCGGGAAGGAATATTGGCTTTGA
AATACGCCCAGACCGGCGACCAACTTGCTGACATTTTAGCGAAAGGACTG
AGCAGATTAAAGTTTCGAGACTGA
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