mRNA_H-paniculata_contig588.13498.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA) HSP 1 Score: 154 bits (390), Expect = 1.130e-42 Identity = 91/206 (44.17%), Postives = 127/206 (61.65%), Query Frame = 1
Query: 7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
IVGS MY +T R +I YA L +R ME P KR+FRYL DLG+ F K NG L GF D+N+A D++D++ST+G+VF + GAIS S+KQQ+VT S+TEAE+IAA + + ++L +L + F +G T + D S I LS+ H S++I VR+H +R+ V E I+ L Y ++ DQ+ADIL K L F
Sbjct: 86 IVGSLMYLTTT-RPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGV-FYKKINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNPILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTKPLKLEAF 289
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA) HSP 1 Score: 158 bits (399), Expect = 2.450e-42 Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 1
Query: 7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-GLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKFR 627
IVGS MY T R ++ + L +R M +P +T KRI RYL D GI + + G L G+ D+++A D++D KST+GYVF L GGA++ SRKQ +VT SSTEAEY+AA + ++++ +LG IGF TLF D S I LSK + H S++I+VR+H +RE +EG++ L + T +QLADI+ K L F+
Sbjct: 273 IVGSLMYL-TATRPDLMFVVCLISRFMANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQ 479
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 152 bits (383), Expect = 2.760e-42 Identity = 80/205 (39.02%), Postives = 128/205 (62.44%), Query Frame = 1
Query: 10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
VGS +Y STR R +IA+A A DP ++ ++ KRI RYL+ + LG+ + K+ G+ DA+WA D++D+KS +GY+FK+ G A+S S+KQ V S+ EAEY+A A +E V++ LL + G+T ++ED +SAI +++ H +++I ++ H IR+ V G + LK +T D +AD+L KGL+++KF
Sbjct: 31 VGSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLY-SKNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKF 234
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 155 bits (391), Expect = 4.200e-42 Identity = 85/201 (42.29%), Postives = 125/201 (62.19%), Query Frame = 1
Query: 7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGL 609
+VGS Y T R ++ Y+ +L +R ME+P + KRI RY+ GI + + G L GFVD+++A DV+D+KST+GYVF L GGA+S S+KQ +VT S+TEAE++AA + ++L +LG IG+ TTLF D S I LSK H S++I VR++ +R+ V E ++ LK+ T DQL+DI+ K +
Sbjct: 159 LVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRY-KQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAV 357
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A1X7UZ54_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZ54_AMPQE) HSP 1 Score: 151 bits (382), Expect = 5.400e-42 Identity = 82/208 (39.42%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGST---TLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
VGS +Y S + R +I +A LAAR +P + + KRIFRYL + G+ F K N + GF DA+W DV D KST+GY+F++ G A++ S+KQ V S+ EAEY+A A +E +L+ L + +GST ++ED +SAI+++K H ++I +++H IR+ VR+ I+ L Y +T + +AD+L K L R+KF
Sbjct: 36 VGSLLYLSMKTRPDITFAVGLAARFSSNPTSQHLTAVKRIFRYLRKTTNYGLLF-RKRNSKSITGFSDADWGGDVTDCKSTSGYIFQIGGTAVTWQSKKQSCVALSTAEAEYVALSSAAQEATWLKQLNQDL----QGSTDPIVIYEDNQSAISIAKNPQFHGRVKHINIKYHFIRDQVRDNIIKLVYCETSEMIADMLTKALGRIKF 238
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 151 bits (381), Expect = 7.840e-42 Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 1 RGIVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
R IVGS + STR R ++A+A AR + P E + K I RYL ++LG+ + KSN L GF D++WA D +D+KST+GY+F G IS S+KQ+ V S+ +AEY+A A +E +++ LL I C T +FED +S I+L+K H +++I +R+H RE V + L Y Q+ D +AD+L KGLS++KF
Sbjct: 38 RSIVGSLINLSTRTRPDLAFAVGELARYCDAPGSEHWVALKIILRYLKNTKNLGLCY-RKSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKF 244
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 160 bits (405), Expect = 9.170e-42 Identity = 89/204 (43.63%), Postives = 119/204 (58.33%), Query Frame = 1
Query: 10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK 621
VGS MYA R +IAYA L ++ P E ++ R F+YL D + + GK L G+VD++WA D D++S +GYVF L G AIS S+KQQ V SSTEAEY+AA A KE V+L LL + T L D + AI L+K H +++I VR H +R+ V +G +A +Y T DQ+AD+L KGLSR K
Sbjct: 1191 VGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREK 1394
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A139WJX6_TRICA (Copia protein-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WJX6_TRICA) HSP 1 Score: 157 bits (398), Expect = 2.300e-41 Identity = 84/208 (40.38%), Postives = 128/208 (61.54%), Query Frame = 1
Query: 1 RGIVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKF 624
R +G M+A+ R +I YA ++ +R +P + KRIF+YL ++LGI + +N L G+ DA++A D++ +KST+G+VFKL GAI+ CSR+Q+ ++ S+TEAEY+AA +A KE V++ GLL +G C G L D +SAI L K H +++I VR+H +RE G + LKY + +Q+AD+ K L KF
Sbjct: 426 REAIGCLMFAAISARPDIMYAVNVVSRYQNNPTIAHVNAVKRIFKYLKGTKELGILY---NNSGKLIGYSDADYANDIDSRKSTSGFVFKLGDGAITWCSRRQRCISLSTTEAEYVAASEATKEAVWISGLLSEVGEKC-GGVALCVDNQSAIKLVKNPMFHKRTKHIDVRYHFVREKYENGDIVLKYVPSTEQVADVFTKALCYAKF 629
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: UPI0018A876E3 (secreted RxLR effector protein 161-like n=2 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A876E3) HSP 1 Score: 149 bits (377), Expect = 3.200e-41 Identity = 85/205 (41.46%), Postives = 121/205 (59.02%), Query Frame = 1
Query: 10 VGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFE-DKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLK 621
+GS MYA+ R ++++A AR +P + + KRI RYL + + F N H +EG DA+WA D++D+KST+GYVFK GG IS S+KQQ S+TEAEY+A AG+E ++L L +G R S+ + + D KSAINLS S H S++I +R H IR V + + ++Y T D AD+L K L+ LK
Sbjct: 41 IGSIMYAAQVSRPDVSFAVGALARYNNNPGKAHWQAVKRIMRYLKGTINYKLQFSKDENAH-IEGISDADWAGDLDDRKSTSGYVFKFQGGCISWNSKKQQTTALSTTEAEYMALAAAGQEALWLRSLFNELG---RSSSIVIKCDYKSAINLSHNSTYHARSKHIDIRHHFIRNLVNDKKVVIEYLNTEDMAADVLTKSLTSLK 241
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Match: A0A6A4N597_LUPAL (Putative RNA-directed DNA polymerase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4N597_LUPAL) HSP 1 Score: 150 bits (379), Expect = 3.320e-41 Identity = 89/207 (43.00%), Postives = 124/207 (59.90%), Query Frame = 1
Query: 7 IVGSFMYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHGLEGFVDANWAEDVEDQKSTTGYVFKLYGGAISLCSRKQQLVTWSSTEAEYIAAGQAGKETVYLEGLLGPIGFGCRGSTTLFEDKKSAINLSKGSGAHCTSRNIKVRWHEIREWVREGILALKYAQTGDQLADILAKGLSRLKFR 627
IVGS MY +T R +I YA L +R ME P KR+FRYL D GI F KS G L GF D+++A DV+D++ST+G+VF + AISL S+KQQ+VT S+TEAE+IAA + + ++L +L + F G T + D S I LS+ H S+ I VR+H +R+ V + + L Y ++ DQ+ADIL K L F+
Sbjct: 72 IVGSLMYLTTT-RPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDFGI-FYKKSEGPILTGFTDSDYAGDVDDRRSTSGHVFMMGSSAISLASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEDLHFYQHGPTVIHCDNSSTIKLSRNPILHGRSKRIDVRYHFLRDLVTDKTIDLVYCRSEDQVADILTKPLKAEAFK 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig588.13498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig588.13498.1 >prot_H-paniculata_contig588.13498.1 ID=prot_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp MYASTRIRSEIAYAGHLAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFback to top mRNA from alignment at H-paniculata_contig588:22872..23504+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig588.13498.1 ID=mRNA_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=633bp|location=Sequence derived from alignment at H-paniculata_contig588:22872..23504+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig588:22872..23504+ >mRNA_H-paniculata_contig588.13498.1 ID=mRNA_H-paniculata_contig588.13498.1|Name=mRNA_H-paniculata_contig588.13498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig588:22872..23504+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |