|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1763 |
| Cds size | 1101 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5874.13489.1 >prot_H-paniculata_contig5874.13489.1 ID=prot_H-paniculata_contig5874.13489.1|Name=mRNA_H-paniculata_contig5874.13489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp
MWSSFSISSAPSPLAVNPPSPDSVDPPIDLRNSTSSPSLCELVGAKNREA
DQVARALQNVLKEGVTVTPSRDLKRRFAQKRPYNSQKRNKAAPRPIASPQ
KFRDFGAIAEGSCFTKANGQGGAPCCQDKCNSRFTQAEMEQQRKSVPVKG
LGQQEARKIFVRSRIASSRKLVLLDSNEIGSFVCWKYFVAVTGCSRNLID
SALKLGGTGMKKRNTVNSKGLTVTSFMNELSSRWEQQPDSQEIHMAIPTK
LFVWQMFVKSSACVALGYEDCSYSYFVQMWQKHFGHVKLKKSMRFTKCDT
CTLASEEEKEEEEEPVQQQQQQGQGRGAGGGGGVAGDSETLQPAPAASHP
TVRMTAAAYRPRRVGR* back to topmRNA from alignment at H-paniculata_contig5874:2030..4613+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5874.13489.1 ID=mRNA_H-paniculata_contig5874.13489.1|Name=mRNA_H-paniculata_contig5874.13489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2584bp|location=Sequence derived from alignment at H-paniculata_contig5874:2030..4613+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCACACATTCCAACTAGGCCAACGTCTTGATGCTCTTGAACGTTGACTA
CGACAGAAATAGACCAACACATCATTTCTTGACACCGCGATGTGGAGTTC
ATTCTCTATAAGTTCGGCTCCGTCGCCTCTCGCCGTCAACCCGCCATCCC
CTGACAGCGTCGATCCGCCAATCGATCTACGGAACTCTACGTCATCTCCA
TCCCTCTGCGAGTTGGTGGGCGCGAAAAACAGAGAAGCTGATCAGGTGTG
TTTTCAGTGCAACACCCGCATGTATTTTACCAAACTTTGTGTTCTGTCCA
CTGCTGTGAGTCAAGCCATTCAGCGGGTGAACTGCTGTAGATCCGTACCC
CACTCCTACTTTCTTCATGTGCCTGTGGTAGTCACCATGAACTGTTGTGG
TTAGGTCTCAAGAGGAGAAACGAGGGGTTCAAAAAGCAGCGACTCGAGTG
TTGTATGTATAGAGGTCTTGGAACAGAAAGTCAGCAGGCGGTTTAATGAA
ATGATGGCTGTAGATTGTAGCTTATCCTGTTGGCTTTTTCATCTTTTGAA
TCTGCCACACTCCAGGTCGCACGTGCATTGCAGAACGTCCTGAAGGAAGG
CGTCACCGTTACGCCTTCGAGGGACTTGAAGCGGAGGTTCGCTCAGAAGC
GCCCTTACAATAGCCAAAAGAGAAACAAGGCAGCACCACGACCCATCGCC
TCCCCCCAAAAATTCCGAGACTTTGGCGCGATTGCCGAAGGTAGCTGCTT
CACTAAAGCAAACGGTCAGGGAGGTGCGCCTTGCTGCCAGGATAAATGTA
ACAGTAGGTTCACCCAGGCAGAAATGGAACAGCAGCGGAAATCAGTCCCT
GTGAAAGGGTTGGGGCAGCAAGAGGCTCGAAAGATTTTCGTTCGCAGCCG
GATAGCCAGCTCCAGGAAGCTAGTCCTTCTCGACTCGAATGAGATCGGAT
CGTTCGTTTGCTGGAAGTACTTCGTCGCCGTCACCGGTTGCTCTCGGAAT
CTCATCGACAGCGCCCTAAAACTCGGTGGCACCGGAATGTGAGCTTGTAG
CGGAAATACCTGAAAATCTTGTACTGCTGTTGTGTTGCTGTTGGTCAGAG
TATTGTTGTTGACGCTTCGTCATTTGCTCCAGATGAGTAGGAAGTCGTTT
GACCGAGATGGACTTGTGGTGCTGCTGTTGCCTGTGTCCAACTCTCATTG
GAGTCTTGAACGACACCGCAACAAGTTGGTGGTGTTAGGACCTGCGCCGC
TTGAGGCCGCTTCCTGCTCTCGACCATTGTTTTAATTTCCATCCATCCTT
GCCTCTTTATATCTTTGTTTGATGCAGGAAAAAACGTAACACTGTAAACT
CCAAGGGCCTGACCGTGACGTCCTTCATGAACGAGTTGTCCAGCCGGTGG
GAACAGCAGCCCGATTCGCAGGAAATCCACATGGCCATCCCAACGAAGCT
GGTGAGATCAGCTTATACCGGGATGGCTCTGATTCGACGACGCTCTCCTC
TTCGCGCGTTATTTCCCCCGCGAACCTTCGTCGATACGTTTTTAAGACGT
TTCCCCTCGTCACCCACGCTCCGCCTTTGTCTCGTCCCCCCAACCCTGCT
CTCAAGTGTTGTTCTGTCCCTATGCTATGCCTGCACCCTCTGTCTGTTGT
TTCGTAACCTCAGTTTGTTTGGCAGATGTTCGTCAAGAGCAGCGCGTGTG
TAGCGCTGGGCTATGAAGACTGTTCGTACTCGTACTTCGTTCAGATGTGG
CAGAAACACTTTGGACATGTGAAGCTGAAGAAGTCGATGAGATTCACGAA
GTGCGACACGTGCACTCTTGCCTCCGAAGAGGAGAAAGAGGAGGAAGAGG
AGCCAGTGCAGCAGCAGCAGCAGCAAGGGCAGGGGAGAGGGGCTGGCGGG
GGCGGAGGGGTGGCAGGGGATTCCGAAACGTTGCAACCGGCTCCTGCAGC
GTCCCACCCAACCGTTCGAATGACAGCGGCTGCGTATAGGCCACGCAGAG
TAGGACGTTAGCGTCGGTCTCCATGTTTCGCGCATACGAACGTTATGTAG
AAGTTGCACTCATGCTGTACAAATTGTTAGAAGGATCTGTGGAAGCAGCA
GCAGCGGCAGCCGTCCGATTGAAGTTAAGGGTGTTCTTCAGAGAGGTGTT
GTTGCGGATGTTGCGGCTGTCCCGGGGAGGGATGACCGAAGCTGTTGTGC
GCAGCAGAGAGATTGGTGTGGACTACCACCATCCGCAAGCAGGTAGGTGC
AGACGACGGAGGAGTCAAATACTTGTGGGTGGTGTAGTCTATCGCCTAGA
AATACCCCTCCTGGTGGCATCAACAACCTGGCACGAAGCCCACGAGCGCT
GCCTCCAACTTGTCAATGCTGACCCGTCAGTTTCACCAAGCGTATGCATG
CCCTAATCATGGACAACAAAACTACAAGCGCATAGCAATACCTTTTGTAC
CACCCTACTTCAACTTTGTGTGACCGTTGAAAAGGCATTTTTGCTGTACT
CTCTGTCTGCGGTGTAGACACTCCAAAAATATGTGTACAACGCCTCATCA
CCATGCATGATGATCAGATCTCGCTAAATGGTAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5874:2030..4613+ >mRNA_H-paniculata_contig5874.13489.1 ID=mRNA_H-paniculata_contig5874.13489.1|Name=mRNA_H-paniculata_contig5874.13489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig5874:2030..4613+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGGAGTTCATTCTCTATAAGTTCGGCTCCGTCGCCTCTCGCCGTCAA
CCCGCCATCCCCTGACAGCGTCGATCCGCCAATCGATCTACGGAACTCTA
CGTCATCTCCATCCCTCTGCGAGTTGGTGGGCGCGAAAAACAGAGAAGCT
GATCAGATGTGGAGTTCATTCTCTATAAGTTCGGCTCCGTCGCCTCTCGC
CGTCAACCCGCCATCCCCTGACAGCGTCGATCCGCCAATCGATCTACGGA
ACTCTACGTCATCTCCATCCCTCTGCGAGTTGGTGGGCGCGAAAAACAGA
GAAGCTGATCAGGTCGCACGTGCATTGCAGAACGTCCTGAAGGAAGGCGT
CACCGTTACGCCTTCGAGGGACTTGAAGCGGAGGTTCGCTCAGAAGCGCC
CTTACAATAGCCAAAAGAGAAACAAGGCAGCACCACGACCCATCGCCTCC
CCCCAAAAATTCCGAGACTTTGGCGCGATTGCCGAAGGTAGCTGCTTCAC
TAAAGCAAACGGTCAGGGAGGTGCGCCTTGCTGCCAGGATAAATGTAACA
GTAGGTTCACCCAGGCAGAAATGGAACAGCAGCGGAAATCAGTCCCTGTG
AAAGGGTTGGGGCAGCAAGAGGCTCGAAAGATTTTCGTTCGCAGCCGGAT
AGCCAGCTCCAGGAAGCTAGTCCTTCTCGACTCGAATGAGATCGGATCGT
TCGTTTGCTGGAAGTACTTCGTCGCCGTCACCGGTTGCTCTCGGAATCTC
ATCGACAGCGCCCTAAAACTCGGTGGCACCGGAATGTCGCACGTGCATTG
CAGAACGTCCTGAAGGAAGGCGTCACCGTTACGCCTTCGAGGGACTTGAA
GCGGAGGTTCGCTCAGAAGCGCCCTTACAATAGCCAAAAGAGAAACAAGG
CAGCACCACGACCCATCGCCTCCCCCCAAAAATTCCGAGACTTTGGCGCG
ATTGCCGAAGGTAGCTGCTTCACTAAAGCAAACGGTCAGGGAGGTGCGCC
TTGCTGCCAGGATAAATGTAACAGTAGGTTCACCCAGGCAGAAATGGAAC
AGCAGCGGAAATCAGTCCCTGTGAAAGGGTTGGGGCAGCAAGAGGCTCGA
AAGATTTTCGTTCGCAGCCGGATAGCCAGCTCCAGGAAGCTAGTCCTTCT
CGACTCGAATGAGATCGGATCGTTCGTTTGCTGGAAGTACTTCGTCGCCG
TCACCGGTTGCTCTCGGAATCTCATCGACAGCGCCCTAAAACTCGGTGGC
ACCGGAATGAAAAAACGTAACACTGTAAACTCCAAGGGCCTGACCGTGAC
GTCCTTCATGAACGAGTTGTCCAGCCGGTGGGAACAGCAGCCCGATTCGC
AGGAAATCCACATGGCCATCCCAACGAAGCTGGAAAAAACGTAACACTGT
AAACTCCAAGGGCCTGACCGTGACGTCCTTCATGAACGAGTTGTCCAGCC
GGTGGGAACAGCAGCCCGATTCGCAGGAAATCCACATGGCCATCCCAACG
AAGCTGTTTGTTTGGCAGATGTTCGTCAAGAGCAGCGCGTGTGTAGCGCT
GGGCTATGAAGACTGTTCGTACTCGTACTTCGTTCAGATGTGGCAGAAAC
ACTTTGGACATGTGAAGCTGAAGAAGTCGATGAGATTCACGAAGTGCGAC
ACGTGCACTCTTGCCTCCGAAGAGGAGAAAGAGGAGGAAGAGGAGCCAGT
GCAGCAGCAGCAGCAGCAAGGGCAGGGGAGAGGGGCTGGCGGGGGCGGAG
GGGTGGCAGGGGATTCCGAAACGTTGCAACCGGCTCCTGCAGCGTCCCAC
CCAACCGTTCGAATGACAGCGGCTGCGTATAGGCCACGCAGAGTAGGACG
TTAGTTTGTTTGGCAGATGTTCGTCAAGAGCAGCGCGTGTGTAGCGCTGG
GCTATGAAGACTGTTCGTACTCGTACTTCGTTCAGATGTGGCAGAAACAC
TTTGGACATGTGAAGCTGAAGAAGTCGATGAGATTCACGAAGTGCGACAC
GTGCACTCTTGCCTCCGAAGAGGAGAAAGAGGAGGAAGAGGAGCCAGTGC
AGCAGCAGCAGCAGCAAGGGCAGGGGAGAGGGGCTGGCGGGGGCGGAGGG
GTGGCAGGGGATTCCGAAACGTTGCAACCGGCTCCTGCAGCGTCCCACCC
AACCGTTCGAATGACAGCGGCTGCGTATAGGCCACGCAGAGTAGGACGTT
AG back to top
|