prot_H-paniculata_contig58722.13487.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig58722.13487.1
Unique Nameprot_H-paniculata_contig58722.13487.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig58722.13487.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.580e-5
Identity = 30/63 (47.62%), Postives = 33/63 (52.38%), Query Frame = 0
Query:   11 YETCSNLFVTVANGETLPIEGYGKMLVWTKDRGEMHKFSFSRVAHVPGLDINLLSLQIVVKQG 73
            YE C    V VA GET PI GYG + V    RG        RVAHVP LD NL+SL  +   G
Sbjct:  415 YEECDRR-VRVAAGETFPIVGYGDVTVTLSSRGGTTDLLLKRVAHVPRLDYNLVSLTSLFDDG 476          
BLAST of mRNA_H-paniculata_contig58722.13487.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.620e-5
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 0
Query:   10 DYETCSNLFVTVANGETLPIEGYGKMLVWTKDRGEMHKFSFSRVAHVPGLDINLLSLQIVVKQGLTVCLKEEGAAIALPNGSDLLCRKIGE 100
            +Y+ C N  V    GE L I GYG + V  +  G+       R AHVPG+D+NL+SL  + ++G T   K  G  +    G ++   ++G+
Sbjct:  578 NYQEC-NRRVKGIGGEFLRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGK 667          
BLAST of mRNA_H-paniculata_contig58722.13487.1 vs. uniprot
Match: A0A6H5JEW4_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW4_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.550e-5
Identity = 34/87 (39.08%), Postives = 40/87 (45.98%), Query Frame = 0
Query:   11 YETCSNLFVTVANGETLPIEGYGKMLVWTKDRGEMHKFSFSRVAHVPGLDINLLSLQIVVKQGLTVCLKEEGAAIALPNGSDLLCRK 97
            YE C    V VA GET PI GYG + V    R         RVAHVP LD NL+SL  +   G       +   + L  G   +CRK
Sbjct:  207 YEECDRR-VRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTPNKHE-LELERGEGRVCRK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58722.13487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JXF7_9PHAE2.580e-547.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L175_9PHAE2.620e-532.97Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEW4_9PHAE3.550e-539.08CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig58722contigH-paniculata_contig58722:146..460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig58722.13487.1mRNA_H-paniculata_contig58722.13487.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig58722 146..490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig58722.13487.1 ID=prot_H-paniculata_contig58722.13487.1|Name=mRNA_H-paniculata_contig58722.13487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MTPSNKLMFDYETCSNLFVTVANGETLPIEGYGKMLVWTKDRGEMHKFSF
SRVAHVPGLDINLLSLQIVVKQGLTVCLKEEGAAIALPNGSDLLCRKIGE
HEFLV
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