mRNA_H-paniculata_contig5872.13485.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5872.13485.1
Unique NamemRNA_H-paniculata_contig5872.13485.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: D7FJA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJA2_ECTSI)

HSP 1 Score: 578 bits (1490), Expect = 1.690e-193
Identity = 297/433 (68.59%), Postives = 345/433 (79.68%), Query Frame = 1
Query:  310 APRSSGCMSIVSKIWEGQTLQEKA--AVDPNASWFTRHRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEKVELAASGQHGESKV 1602
            AP ++   S   K+WEGQTL+ +A  AVDP+ASWF RHRRL+ FV P  IA+IIWWSYAA++PSTFDLF D T   DTPNWYMCVTM FGSM+AGATSEGGA+VAFP+MT+AFGI P VARDFSFMIQSAGMT+AAATI +M+VQVEMHSLLW+T+GG+ GI+LGLE+VAPRL P YSKM+FV TWAAFA SLFWLNR  GRRVF +IP WEEGVLW+ E+                    + L +++NWKACV+F CGF+GGIFSAISGSGIDICTFS+LTLLFRV+EK ATPTSVVLMAINTLVGF+YRQLAMGGVE EAVRFFTVCVP+VVIGAPLGSLLGSH HRLVLA+ +Y+TDGVQFIGAL +V+PWS  +T TP  L L+S AI++ G  VF  LA+ G  LL   E +EK   AA  Q G+ KV
Sbjct:    3 APVATTSSSKWPKLWEGQTLKGEATKAVDPSASWFVRHRRLVGFVVPGLIAHIIWWSYAATHPSTFDLFTDVTA--DTPNWYMCVTMAFGSMVAGATSEGGASVAFPIMTLAFGIAPIVARDFSFMIQSAGMTAAAATIVIMQVQVEMHSLLWATVGGVAGIILGLEEVAPRLEPAYSKMFFVSTWAAFACSLFWLNRLMGRRVFLSIPNWEEGVLWEVELPA------------------VKLGVSVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFIGALVIVRPWSYHRTTTPLKLSLSSAAILVVGSIVFYLLARTGGRLLDNFESREK---AAIEQSGDEKV 412          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: A0A7S3XM94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM94_HETAK)

HSP 1 Score: 459 bits (1181), Expect = 1.300e-147
Identity = 245/427 (57.38%), Postives = 297/427 (69.56%), Query Frame = 1
Query:  352 WEGQTLQEKAA-VDPNASWFTRHRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEKVELA-ASGQHGESKVNYWTIEGT 1626
            WEGQ L + A  + P+A W+ RHRRL+A   PA + +I WWSY  S  + F +F +  G+   P WYM +TM+FGSMIAGATSEGGA+VAFPVMT+AFGI P++ARDFSFMIQS GM +A  TI  MRVQVE HSLL+ +LGG  G+VLGLE VAP L+PP SKMYFV  W AFAFSL+ LNR YGRRV+  +PRWEEGVL++                           +  NWKA  +F  G +GGIFS ++GSGIDIC+F+ LTLLFRVSEK+ATPTSVVLMA NT++GF++R  A GGVE EA RF  VCVPIVV+GAP GS++GSHFHRLVLA+FVYVTD VQ IGALA+VQPW++ KTD P HLCL+S AI++ G   F  LA  G   L K E  E    A A   H E+  +    EG+
Sbjct:   27 WEGQQLADTATKISPDAPWYIRHRRLLAMAIPAVVFHIGWWSYMISQ-NAFGIFAEKYGSV--PRWYMSITMLFGSMIAGATSEGGASVAFPVMTLAFGIKPAIARDFSFMIQSCGMVAAGFTILAMRVQVEYHSLLYCSLGGFLGMVLGLEYVAPSLTPPESKMYFVVIWFAFAFSLYQLNRLYGRRVYGMVPRWEEGVLFQLG------------------------PLAFNWKAATLFCFGVLGGIFSGMAGSGIDICSFACLTLLFRVSEKVATPTSVVLMAGNTVIGFLWRHFAQGGVEPEAWRFLAVCVPIVVLGAPFGSVIGSHFHRLVLAAFVYVTDTVQLIGALAIVQPWTSKKTDAPLHLCLSSLAIVLAGMVFFKLLAWAGQRQLDKFEALEGAGSANADSDHLEAVASAEVEEGS 426          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: A0A7S2UZR2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZR2_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 4.000e-141
Identity = 225/383 (58.75%), Postives = 280/383 (73.11%), Query Frame = 1
Query:  442 PATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEKVELAASGQHG 1590
            PA + +I WW+YAA N  TF LF +  G    P WY+ +TM FGSMIAGATSEGGA+VAFPVMT+A GI P VARDFSFMIQS GMT+AA TI  MRV++EMHSL++ T+GG+ GI+ GLE VAP L+PPYSKMYFV  W +FAFSL+ LNR +GR+V++ IP W+E V+++                        A  + +NWKAC +   GF+GGIFSA++GSGIDIC+F+ LTLL+RVSEK ATPTSVVLMAINT+VGF+YR+  MGG E E+ +F  VC+PIVV+GAPLGS++GSHFHRLVLA+FVYVTD VQ +GAL VV+PWSTLKT TP HL LTS AI+I G   F  LA  G  +L K E + +++ A   + G
Sbjct:    5 PAVVFHIFWWTYAAQN-DTFKLFTED-GGMGNPRWYVSLTMAFGSMIAGATSEGGASVAFPVMTLALGIAPPVARDFSFMIQSCGMTAAAFTIFWMRVKIEMHSLIYCTIGGLAGIIFGLEYVAPELTPPYSKMYFVVIWFSFAFSLYNLNRLHGRKVYDEIPCWDEAVIFR------------------------AGPLAINWKACTLVMTGFMGGIFSAMAGSGIDICSFACLTLLYRVSEKTATPTSVVLMAINTVVGFLYREYGMGGAEPESYKFLLVCLPIVVLGAPLGSVIGSHFHRLVLAAFVYVTDTVQLVGALVVVRPWSTLKTPTPLHLSLTSLAIVISGAVFFRFLAWAGEKMLDKQEAEAELQAAKHVEEG 361          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: A0A7S4EBQ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBQ0_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.200e-104
Identity = 213/455 (46.81%), Postives = 276/455 (60.66%), Query Frame = 1
Query:  313 PRSSGCMSIVSKIW-EGQTLQEK--AAVDPNA-SWFTRHRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGA-----KDTPN-------------WYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMG-GVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLK----------------TDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEK 1560
            P+ S C++  SK + EGQ ++++  A +D    SW  + R+ +A   P  + +I+WW+ A    +++  F D         K  PN             WYM VTM+FGSM+AGATSEGGA++AFPVMT+A  + P VA+ FSFMIQS GMT+AA  I  M+V+V+  S+ + +LGG  G++ GLEQVAP L+PPY+KMYFVC   +FA SL++LNR +GR+V+  +       +W       G  T               L + LNWKA ++   GFIGGIF++I+GSGIDIC+FSVLTLLFRVSEK ATPTSVVLMAINT +   Y +  M  G+E  A  FF VC PIVV+GAPLGS+LGS+ HRLVLA+FVY TD VQ IGAL VVQPWS  K                T  P HLC +S AI I G   F  +   G  L++K    EK
Sbjct:   25 PKES-CLAFCSKYFCEGQRVEKELQAKIDEGTLSWTEKWRKQLAMAVPFLLVHIVWWT-AMIRWNSWHKFTDRIAQQQRFRKVLPNGKSIRTMHSNVRPWYMSVTMIFGSMVAGATSEGGASIAFPVMTLAMDVKPHVAKQFSFMIQSVGMTAAAFVILYMQVRVDWKSITYCSLGGAFGVIFGLEQVAPTLTPPYAKMYFVCWAGSFAASLYFLNRIHGRKVYLVVDPKHLPEIW-----AMGDLTPY-----------WQLNLLLNWKAMILLGAGFIGGIFTSIAGSGIDICSFSVLTLLFRVSEKTATPTSVVLMAINTFLAMCYCKWMMREGLEQLAWEFFCVCAPIVVVGAPLGSVLGSYVHRLVLAAFVYATDFVQLIGALIVVQPWSREKCTKELAPAKEMALGPETCNPTHLCWSSAAIFICGLVAFWVMQWAGEKLIQKNTATEK 461          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: UPI0010FCC5EB (uncharacterized protein LOC114969485 isoform X1 n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FCC5EB)

HSP 1 Score: 343 bits (880), Expect = 4.700e-103
Identity = 200/425 (47.06%), Postives = 254/425 (59.76%), Query Frame = 1
Query:  313 PRSSGCMSIVSKIWEGQTL-----QEKAAVDPNASWFTR----HRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEK 1560
            PR +    +    WEGQ L     Q  A +DPNA W  R    HRRL+    P     +IWWS A     T+D ++   G      +++ +TM+FGSMIAG TSEGG AVAFPVMT+AFGI P+VARDFS MIQS GMT+AA TI  MRVQ+E HS+++ ++GG+ G+ LGLE + P L+PP  KM FVC W +FAF+LF LNRY  R+ F+ IP                     D K                WK  V+F  GFIGGIFSAI+GSG+DIC+FS+LTLLFRVSEK ATPTSVVLMA NT+VGF +RQ+    V  +A  +  VCVPIVV+GAP GS++GSHFHR VLA  +YV D V  + A A+V           + L   S  II  G   F  +   GH L+  +E++++
Sbjct:   63 PRRTFTEWLKKYFWEGQALTSTQTQALAQLDPNAPWHERLIVKHRRLVGVAIPFLFYQVIWWSCAI----TYDFWDLFPG-----RYFISITMIFGSMIAGMTSEGGGAVAFPVMTLAFGIKPAVARDFSLMIQSCGMTAAAFTIFWMRVQLEWHSIIYCSIGGLIGMALGLEFIDPNLTPPQKKMGFVCVWFSFAFALFLLNRYQKRKTFKIIP---------------------DFKF---------------WKMVVLFLTGFIGGIFSAIAGSGVDICSFSILTLLFRVSEKTATPTSVVLMAGNTVVGFYWRQVIQQAVSADAYYYLAVCVPIVVLGAPFGSVIGSHFHRQVLAGLIYVLDTVALVSAYAIV--------PLTKALIGASVGIIAFGFIFFGIITYAGHKLMESIEDEKE 434          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: F0Y077_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y077_AURAN)

HSP 1 Score: 338 bits (868), Expect = 4.000e-101
Identity = 203/448 (45.31%), Postives = 267/448 (59.60%), Query Frame = 1
Query:  352 WEGQTLQEKAAVDPNASWFTRHRRL--IAFVAPATIANIIWWSYAASNPSTFDLFNDTTGA---------KDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMG-GVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDT-------------------PRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEKVELAASGQHGESKV 1602
            W  +  +++A   P  S   R R    +A + P  + +++WW+ A     ++  F D  G           D   WYM VTMVFGSM+AG TSEGGA+VAFPVMT+A  + P VA+ FS+MIQS GMT+AA  I  M+V+VE  S+ + ++GG+ G++ GLE++AP L+PPY+KMYFV  W +FA SL++LNR +GR+V+  +       +WK               S D      A  + LNWKA V+   GFIGGIF++ +GSGIDIC+FSVLTLLFRVSEK ATPTSVVLMAINT++   Y +  M  G+E  A  FFTVC PIVVIGAPLGS++GS+ HRLVLA+FVYVTD VQ +GAL VV+PWS  K +                    P HLC TS  +   G   F      G  L+ +    EK E+   G  G+ +V
Sbjct:   47 WTVKYRKQRAPASPKMSRTRRIRTTSRLAMLIPFLLVHVVWWT-AFIRWDSWHKFTDKVGQMDKYKHLLRSDVKPWYMSVTMVFGSMVAGMTSEGGASVAFPVMTLAMDVKPHVAKQFSYMIQSVGMTAAAFVILYMQVRVEWKSITYCSIGGMVGLIYGLEEIAPVLTPPYAKMYFVVIWGSFAASLYYLNRIHGRKVYLVLDPKHLPEIWK---------------SADLTPYWWA-NLVLNWKALVLLAAGFIGGIFTSFAGSGIDICSFSVLTLLFRVSEKTATPTSVVLMAINTVIAMCYCKWMMREGLEALAWEFFTVCAPIVVIGAPLGSVVGSYVHRLVLATFVYVTDFVQLVGALIVVRPWSDHKCNKDGERVPHGSAGRWRGTNCEPVHLCWTSALLFASGLIAFYIFQLAGEKLMERNARIEK-EVLGDGDPGDVEV 476          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: A0A7D9LJD9_PARCT (Uncharacterized protein LOC110044725 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LJD9_PARCT)

HSP 1 Score: 334 bits (856), Expect = 3.860e-100
Identity = 198/426 (46.48%), Postives = 255/426 (59.86%), Query Frame = 1
Query:  355 EGQTLQEKAA-----VDPNASWFTR----HRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEE--QEKVELAASGQHGESK 1599
            EGQ L          +DPNA W+T+    HRR +  + P TI  IIWWS A    + +DLF D         +Y+ +TM+FGSMIAG TSEGG AVAFPVMT+AF I P++ARDFS MIQS GMT+A  TI  MR+Q+E  S+++ + G I G+++GLE + P L+PP  KM FV  W AFAF+LF LNRY+ R+ F  IP +                                      WKA V+   GF+GGIFSA++GSG+DIC+FS+LTLLFRVSEK ATPTSVVLMA NT+VGF +RQ+ M  +  ++  +  VCVPIVV+GAPLGS++GSHFHR VLA+ +Y+ D V  I A A+V+   TL           S  II+ G   F  L+  GH L+R + E  +E  E  AS   G  K
Sbjct:   16 EGQALSNTQTEALKNLDPNAPWYTKLLVKHRRWVGVLIPFTIVQIIWWSCAIKY-NYWDLFPD--------RFYISITMIFGSMIAGMTSEGGGAVAFPVMTLAFSISPAIARDFSLMIQSVGMTAATFTIFWMRIQLEWRSIIFCSSGAILGMIIGLEFIDPNLTPPQKKMGFVSIWFAFAFALFLLNRYHKRKTFRIIPEFN------------------------------------TWKAGVLLLTGFLGGIFSAVAGSGVDICSFSILTLLFRVSEKTATPTSVVLMAGNTVVGFYWRQVMMEEILIDSYHYLAVCVPIVVLGAPLGSVIGSHFHRQVLAALIYILDTVALISAFAIVKLNPTLIG--------VSVGIIVFGFVFFGFLSYLGHRLMRSIAEDGEEARESTASNAPGVDK 388          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: A0A1S3JIM9_LINUN (uncharacterized protein LOC106173617 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JIM9_LINUN)

HSP 1 Score: 333 bits (855), Expect = 1.200e-99
Identity = 197/446 (44.17%), Postives = 263/446 (58.97%), Query Frame = 1
Query:  286 PVTAEAQDAPRSS--GCMS----------IVSKIWEGQTL---QEKA--AVDPNASWFTR----HRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEK 1560
            P +A A+D   +S  GC            +    WEGQ+L    +KA   +  +A W+ +    HRR+I  + P+++   IW +  A   + + LFN+         ++M +TMVFGS+IAG TSEGG AVAFPVMT+AFGI PS+ARDFS MIQSAGMT+AA TI  M+VQ+E HS+++ +LGG  G ++GLE + PRL+P   KM FVC W +FAF LFWLNRY+ RR F  IP +     W                                WKA V+   G +GG+F+A +GSG+DIC+FS+LTLLFRVSEK +TPTSV+LMA NT+VGF +R + M  +E E+  F  VCVPIVV GAPLGS++G+HFHRLVLA  +Y+ D V  + A A+V+P S           L    II+ G   F  L++ G   L   E  E+
Sbjct:   22 PTSATAEDTSDNSRTGCCRRKRPFSLAAFLKKYFWEGQSLTATHQKAIETIRHDAKWYQKAMILHRRIIGILIPSSLFLFIWLTIMAKR-NLWHLFNE--------KYFMSITMVFGSLIAGMTSEGGGAVAFPVMTLAFGIKPSIARDFSLMIQSAGMTAAAFTIIWMKVQLEWHSIIFCSLGGGIGTIVGLEFIDPRLTPQQKKMGFVCIWFSFAFVLFWLNRYHKRRTFPKIPNFN----W--------------------------------WKALVLIATGLLGGVFTAFAGSGLDICSFSILTLLFRVSEKTSTPTSVILMAGNTVVGFYWRSVIMEAIELESWEFLAVCVPIVVFGAPLGSVIGTHFHRLVLAGLIYIIDTVALVSAFAIVRPLSV-------EFVLVCVGIIVFGALSFFLLSRAGQKFLEVSERGEE 415          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: UPI00106C383B (uncharacterized protein LOC114534560 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C383B)

HSP 1 Score: 332 bits (850), Expect = 2.380e-99
Identity = 189/412 (45.87%), Postives = 252/412 (61.17%), Query Frame = 1
Query:  355 EGQTLQEKAA-----VDPNASWFTR----HRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQEKV 1563
            EGQTL          +DP+A W+TR    HRR +  + P TI  +IWWS  A   + +DLF D         +++ +TM+FGSMIAG TSEGG AVAFPVMT+AF I P++ARDFS MIQS GMT+A+ TI  M++Q+E  S+++ ++G + G+V+GLE + P L+PP  KM FV  W AFAFSLF LNRY+ R+ F  IP +                                     +WKA V+   GF+GGIFSA++GSG+DIC+FS+LTLLFRVSEK ATPTSVVLMA NT+VGF +RQ+ M  +  ++  +  VC PIVV+GAPLGS++GSHFHR VLA+ VY+ D V  I A  +V+   TL           S  II+ G   F  L+  GH L++ + +  +V
Sbjct:   17 EGQTLSNAQTEALKNLDPDAPWYTRLIVKHRRWVGILIPFTIVQVIWWS-CAIRYNYWDLFPD--------RFFISITMIFGSMIAGMTSEGGGAVAFPVMTLAFNISPAIARDFSLMIQSVGMTAASFTIFWMKIQLEWRSIIFCSIGAVLGMVIGLEFIDPNLTPPQKKMGFVSIWFAFAFSLFLLNRYHKRKTFRIIPEFN------------------------------------SWKAGVLLFTGFLGGIFSAVAGSGVDICSFSILTLLFRVSEKTATPTSVVLMAGNTVVGFYWRQVMMEAIHIDSYHYLAVCAPIVVLGAPLGSVIGSHFHRQVLAALVYILDTVALISAFVIVKLNPTLIG--------VSVGIILFGFVFFGFLSYLGHRLMQSIADDSEV 375          
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Match: UPI000A2A4B0E (uncharacterized protein LOC110244058 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4B0E)

HSP 1 Score: 330 bits (847), Expect = 3.870e-99
Identity = 195/427 (45.67%), Postives = 253/427 (59.25%), Query Frame = 1
Query:  304 QDAPRSSGCMSIVSK-IWEGQTLQE-----KAAVDPNASWF----TRHRRLIAFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSMIAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALMRVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFSLFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDLALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIATPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSLLGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAIIIGGGAVFSGLAKGGHYLLRKLEEQ 1554
            QD     GC +   +  WEGQ+L +     K  +  ++ W+     ++RR I    PA   +  WW     +   + LF +         +YM +TM+FGS+IAG TSEGGA+VA+P+MT+AF I PSVARDFSFMIQS GMT+AA TI  MRV  E  SL++ +LGG+ G++ GLE + P L+PP+ KM FVC W  FAF+LF LNRY  R+ ++ IP                     D K                WKA V+   GF+GGIFSA SGSG+DIC+FSVLTLLFRV+EK ATPTSV+LMA NTLVGF +RQ+ + GV  +A  F  VC+P+VVIGAPLGSL+G+HFHRLVLA  +Y+TD V  I A  +V         TP  L  TS  II+ G + F  L K G  ++   E +
Sbjct:    8 QDNSVQDGCFARFKRYFWEGQSLNKRHHTAKTKLQHDSPWYKVILVKYRRFIGLALPAVFFHFWWWGVFIKH-DLWHLFQE--------KYYMSITMIFGSIIAGMTSEGGASVAYPIMTLAFNIKPSVARDFSFMIQSCGMTAAAFTIIFMRVHTEQFSLVFCSLGGVIGMIFGLEVIDPLLTPPFKKMGFVCIWFTFAFALFLLNRYRDRKTYQRIP---------------------DFKV---------------WKAIVLLLTGFMGGIFSAFSGSGLDICSFSVLTLLFRVTEKTATPTSVILMAGNTLVGFFWRQVMIDGVSVDAWEFTGVCIPVVVIGAPLGSLIGTHFHRLVLAGLLYLTDTVALISAFCIVP-------QTPP-LIGTSLGIIVLGFSFFFFLTKAGERIMINXESR 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5872.13485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJA2_ECTSI1.690e-19368.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XM94_HETAK1.300e-14757.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZR2_9STRA4.000e-14158.75Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S4EBQ0_9STRA1.200e-10446.81Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI0010FCC5EB4.700e-10347.06uncharacterized protein LOC114969485 isoform X1 n=... [more]
F0Y077_AURAN4.000e-10145.31Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7D9LJD9_PARCT3.860e-10046.48Uncharacterized protein LOC110044725 (Fragment) n=... [more]
A0A1S3JIM9_LINUN1.200e-9944.17uncharacterized protein LOC106173617 n=1 Tax=Lingu... [more]
UPI00106C383B2.380e-9945.87uncharacterized protein LOC114534560 n=1 Tax=Dendr... [more]
UPI000A2A4B0E3.870e-9945.67uncharacterized protein LOC110244058 n=1 Tax=Exaip... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5872contigH-paniculata_contig5872:2015..11092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score577.8
Seed ortholog evalue4.5e-162
Seed eggNOG ortholog2880.D7FJA2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sulfite exporter TauE/SafE
EggNOG OGs2CN7N@1,2QUD0@2759
Ec32 ortholog descriptionTransmembrane protein TauE like
Ec32 orthologEc-12_008300.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size3476
Cds size1353
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930640.1362255-UTR-H-paniculata_contig5872:2014..38581622930640.1362255-UTR-H-paniculata_contig5872:2014..3858Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5872 2015..3858 -
1691481384.993828-UTR-H-paniculata_contig5872:2014..38581691481384.993828-UTR-H-paniculata_contig5872:2014..3858Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5872 2015..3858 -
1622930640.2622042-UTR-H-paniculata_contig5872:10813..110921622930640.2622042-UTR-H-paniculata_contig5872:10813..11092Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5872 10814..11092 -
1691481385.0692494-UTR-H-paniculata_contig5872:10813..110921691481385.0692494-UTR-H-paniculata_contig5872:10813..11092Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5872 10814..11092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930640.1550195-CDS-H-paniculata_contig5872:3858..40391622930640.1550195-CDS-H-paniculata_contig5872:3858..4039Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 3859..4039 -
1691481385.006735-CDS-H-paniculata_contig5872:3858..40391691481385.006735-CDS-H-paniculata_contig5872:3858..4039Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 3859..4039 -
1622930640.1699114-CDS-H-paniculata_contig5872:4574..47161622930640.1699114-CDS-H-paniculata_contig5872:4574..4716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 4575..4716 -
1691481385.0162132-CDS-H-paniculata_contig5872:4574..47161691481385.0162132-CDS-H-paniculata_contig5872:4574..4716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 4575..4716 -
1622930640.1856527-CDS-H-paniculata_contig5872:5225..54191622930640.1856527-CDS-H-paniculata_contig5872:5225..5419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 5226..5419 -
1691481385.0238736-CDS-H-paniculata_contig5872:5225..54191691481385.0238736-CDS-H-paniculata_contig5872:5225..5419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 5226..5419 -
1622930640.2042847-CDS-H-paniculata_contig5872:6078..63861622930640.2042847-CDS-H-paniculata_contig5872:6078..6386Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 6079..6386 -
1691481385.032023-CDS-H-paniculata_contig5872:6078..63861691481385.032023-CDS-H-paniculata_contig5872:6078..6386Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 6079..6386 -
1622930640.2192209-CDS-H-paniculata_contig5872:6644..68511622930640.2192209-CDS-H-paniculata_contig5872:6644..6851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 6645..6851 -
1691481385.041041-CDS-H-paniculata_contig5872:6644..68511691481385.041041-CDS-H-paniculata_contig5872:6644..6851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 6645..6851 -
1622930640.231186-CDS-H-paniculata_contig5872:7164..73601622930640.231186-CDS-H-paniculata_contig5872:7164..7360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 7165..7360 -
1691481385.0506551-CDS-H-paniculata_contig5872:7164..73601691481385.0506551-CDS-H-paniculata_contig5872:7164..7360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 7165..7360 -
1622930640.2468045-CDS-H-paniculata_contig5872:10688..108131622930640.2468045-CDS-H-paniculata_contig5872:10688..10813Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 10689..10813 -
1691481385.0611653-CDS-H-paniculata_contig5872:10688..108131691481385.0611653-CDS-H-paniculata_contig5872:10688..10813Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5872 10689..10813 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5872.13485.1prot_H-paniculata_contig5872.13485.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5872 3859..10813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5872.13485.1

>prot_H-paniculata_contig5872.13485.1 ID=prot_H-paniculata_contig5872.13485.1|Name=mRNA_H-paniculata_contig5872.13485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=451bp
MPPVTAEAQDAPRSSGCMSIVSKIWEGQTLQEKAAVDPNASWFTRHRRLI
AFVAPATIANIIWWSYAASNPSTFDLFNDTTGAKDTPNWYMCVTMVFGSM
IAGATSEGGAAVAFPVMTIAFGILPSVARDFSFMIQSAGMTSAAATIALM
RVQVEMHSLLWSTLGGICGIVLGLEQVAPRLSPPYSKMYFVCTWAAFAFS
LFWLNRYYGRRVFEAIPRWEEGVLWKREICVRGGTTTTDVKSGDSKRKDL
ALAITLNWKACVVFTCGFIGGIFSAISGSGIDICTFSVLTLLFRVSEKIA
TPTSVVLMAINTLVGFIYRQLAMGGVETEAVRFFTVCVPIVVIGAPLGSL
LGSHFHRLVLASFVYVTDGVQFIGALAVVQPWSTLKTDTPRHLCLTSFAI
IIGGGAVFSGLAKGGHYLLRKLEEQEKVELAASGQHGESKVNYWTIEGTV
*
back to top

mRNA from alignment at H-paniculata_contig5872:2015..11092-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5872.13485.1 ID=mRNA_H-paniculata_contig5872.13485.1|Name=mRNA_H-paniculata_contig5872.13485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9078bp|location=Sequence derived from alignment at H-paniculata_contig5872:2015..11092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCCGACGCCAACCACGCACGCCCCCGTGAACCACACACCCCACAACCCC TTCCCGACCGTCACACCCTTCTCTCCCGATCCTTCCATAGTCACCGACTA TCCCTACATACGTTTGTCTTAGTACCCTGGGTAATCGCGTCGAAATCCGT GCCGACTTGAGCAAATTTGCGTGATTTTTCTGGTGTAGAGAAAAGGCTAA TTTCGGGCCGAACTTGCGCCCTCACCAAATAGTTAATAGTCAGGACGTCG TATCTCTCTCACAACTATCTAGCTAGCTCATGCCGCCCGTGACCGCAGAG GCACAAGATGCTCCGCGGAGCAGCGGATGCATGTCGATTGTTTCCAAGAT TTGGGAAGGCCAGACGCTCCAGGAGAAGGCTGCCGTCGACCCTAATGCTA GCTGGTGAGTTGGGTGCAAAAGGTTTGGAGAGCGATACCGTGACCGGATA TGAAGGATGTTTCATGATTATCCTGTAGTGCACTGTCGTCTGCTGTTTTT TGTCTGTACCCATAAGTTGTGAGGTAAAAGATGTCACCACAAGGTGATGG TTGATGATGGTGTGCATGAATGAACACGTACTAGCGTTTCTGATTGCGTT GGCGCTTGCGGTTGTTATTGAGGGGGTACTGCAGACCTACCGTTTATCCG CCGTGCAAGCATGTCACTATTTTTTCTCCAATCTAGACAGCATACGACTG TCGGCTGTTGTCTACTACTGTAGTGTAGTGTACTGTACCAGCCGGCATCT GCCATTTATTGGGACAGGGGACTTCCGTTGTGACTGTTGAAAACTGGCGT TTGTCACCTGCCTTCAGCACATACCGACAATGCAGAAGTTGAGTTCCTGA GGGTGCGTTACTATCACTTAGATAGTCATTGCCCGAACTGGTCACATGAT TGTCATCCTCCCAACACGAGACTCTCCGCCCTATTTTATACCAAGTACAG TATGGGCCTTCTGGTTGTGGTCGGGTTTCCGGTACATGTACAGTCAGCCA GTAAAACATGTTCTTGAGTGGTTAAAGAGAAGAGAGGAGCATTGTTAGTA CTGATGCTATATGATAGACAATTCAATACTTGAGTTGGTGCAGCAGAAAT TGCCGAGGCCCAGACTGTTCCTATGATACGTTGGCCGAAAGACGGAAAGA TTTGGGCGATGTCTTTCCATTTTGTAGCTGTCCAAGTGTCGCCTATTGTG GATTGGCTACATTTCATGGTGCATTAGTTGTCAACGGCAGTAGCCGATGT ATTGTTCCGCTCTGTCGTATCACTGACATGCGCTCTGCATGTTTCAAGTC ATGCGGTATCAGAGCATCACTGTGCTGTACTATCTCTCACGTCGTGAGGT CCTATGTACTAGTGGGAATGAACACATGGAGATACCCACGACATGAGCAA TAGATCAATCAATATTTGATGTTGAGCAATGTTGACAACGCGCCGAACAT ACGGAAGTACACGCGCATACACAGACAGTCTGGTTGCGTAGATGAAAAAA ACATCGAGAGCCGAAAACTCAAAACGTTACAACGCGAGGGGCGTTTGTGA CCGTAGACGCAATCGCTGATATCCTTCGTTGATTTCCTGAATACATGAGC ACGTCCGCTGTCGTCTTTGTCCCTCTGTGGAGCCTCTTGTGTCTGGGCTC TTGTGATGGTCTGCACTTCACACGAAAAATTTTGTGCGGAGTATCAATGA GGAGGCTGTTCTTATCGCGGAGCCCCCTACGAGATGTTAATTTCATAATC ATGACATCGACATCATGAACAGGTTTGAGACTTCAATCTGTGTCAAGAAT TTGAGATTTATTACTGGACACTAATTGTACTTGTAAGTATGAGGATCAAG GCCGTTACTTGCGTGAGAAACCGTTATTGGGCCTGCTGGCATCGGACCCA TCAAAGCGTTCACGATAAAACAAGTGTTTTTGTGCGTAAACTTTCTGACT ATTAATAGCTGATCGGGAACAGAGGCCCAACGGTAATTAGCTATATGATA GCCTTGTTGACCACTGTCACACGGAAGAGTGACAAAAATAATGAATTTTT GTCCGAAGTTTTTGTTTTTGTATTAATAACCCCTCAAACGCAGGAGACCT GTCATACAGTTATTCCCAAAAGGTAAGAAGGGGGCACATGGATTGTTTTC ATTCAGACAAAGTATCCAATTCCACAAATGTCCGATGCTGCTTAAATGTA TGTATGAAAGTTTGTGGGCAACCCAAAATTTTCAGACTACAACATTATAT GACAGATGATGAAGCTGCTCTTGCGGGCGTCGAAAAAATGATATCTGAGA TTTACCGACGTTTTGTCGCGGTCGACAGGGTTATCGATACGATCCGCCTC GATCTATCTTATCACCAACTCACCGAGAGAATGATAGCTCACCTGCGCGT TTCAGGCGTTAACTTTTCGAACGCCCCAGGCCAAAAGCTCGAGCGAGAAA GTAAATAGATTCAGCTGCGTCGGAAAGTTGGGCCTGTTCACACGATTTTC TCTCGGCCTAGGGTACGTTGGCTGAGGTGAAATAGGGCGCCCTTGGAGCC GTTTTCTAACGCAAAATATTTCACTGTAACAGAAAGCAGCTCACCACTGA GCTGCTTTCTGTTACAAAAGTTAATCATGAGGTCCGAACAACCGACCATT TTCACTCCGGGGAGGGCTACTCCCCTTGCCGGCGCTACCTGTACTTGCTG ATTTTCTCAATTCGAGGGACAGGTCAATTTTTTCCTGAGTATTATCTCTC CACGACAGTTCCATTGCCGCACCGTCCACATCGAAACCTCACAAGAAAAT CTGCACTGGGATTCGAACTCATGATTAACTTTTGTAACAGCGCCAGGATT CTTTTTGTTACATCACCCCCCAGACAAGAACAAATACTTGCAAATGTTTT TCCTAAAAAACTGGAAGTATTCGTCTGAGTTTCAGAATTAGGAGACAAAT GGAATAACGCCCCCGGACATTCAAGTTACGAGTATACCTGGCTGTCGCGG ATGGTCTGGGGCATATCGAACAAACGAGCTCATTCTAAAACTCAGGCGAA TACTTTTGCAAGTATTCGTGTTTGTCTGTGGAGCTTGCTCTTGTGCACAC GTTTTGGGCTCTCCAGGAAGTGACGACAGCATGACTTCACCTGCCATCGT AGTGTGCTGAATTTGTACATCTCAGTCGCCGCATTCGAATTGGTGAAGTT GGCAGTACCACTGGTTTGTTTGGGCGTTGGATACAAATTGTCGATCTCAT CATGGTTGTAGATAGTAGATAGCATGCATGAAATTAGAAATTAGCGACGC CGTGTACCATGCGGCTTTATACGCGGACCGTTGTTTTTTATTTCAATGCC GGAAGCTGTTCTGAACCGAATGAGGCGTATGTTAACAAAACTAAACGCTT GAGGTACCACACCCCGAAACGGACCATAATGGCAAGTCAGCAGTTGAACG TCGCCATCGCCGCCTAGCATTGGGGACTCAGCATGTTGCTGTCTCTGACT CGTGGGGCAAACGCGATGCCGCTTGTGGACACGTGTACAGTGCGTGTGTG CCGATCATGAGTGAGCTCTTCGTTCTGTGAAGCGTTTGAATTGAGTGTCT CCTTGGATATGTTGACCTACCCATTTTATTTTTCTCCTGGAAACGCGGCC ATGCGGCAGCACTTTATTTCGCTCCATCTGCCTGCCCTGCCTCGCCCCCC CACGGTTTCTGTATCATCGCATCCGTCATCAGGTTCACTCGCCACAGGCG TTTGATTGCTTTCGTCGCCCCCGCTACCATCGCTAACATTATCTGGTGGA GCTATGCTGCGAGCAACCCGTCGACTTTCGACCTGTTCAATGACACCACA GGCGCCAAAGACACCCCCAACTGGTATATGTGTGTGACGATGGTTTTTGG GTCCATGATAGCCGGAGCCACTAGTGAGGTAAGACAGACTTGGGACTTGA GACATGGTATCATTATTTTTGCTGTTTTCGGTTTTTGATTTCGTACCCTT TGTTGCGTAGTTCGTTTTTTGGGTTCGTAATCCCTCCAAAGGGTTTGTCA CGAGTTGCGATAAATTCGAGTTTTGACTTCAGTTGAGAGACTGCAGTTGA GAGATGACAGTAGTCACCGAACGTAAAATCATAATTGGCAGCATTTCATT AGAGACCTTGATCTGTTGTTCGCTGCGTTTTATTTTTCGTAGTTAAACCA TCAATGTGTATACAATCGCGTGACACGTGACGCCATGACAGGGTGGTGCA GCCGTAGCGTTTCCTGTAATGACGATCGCCTTCGGCATCCTCCCCTCCGT GGCGCGAGACTTCTCGTTCATGATTCAAAGTGCCGGGATGACGTCTGCCG CAGCCACGATAGCTTTGATGCGGGTGCAGGTGGAGATGCACTCGCTACTC TGGTCCACCCTCGGCGGTATCTGCGGCATTGTGCTGGGCCTCGAACAGGC GAGTTGATCACTGTCATGTTCCCCACGCATATATGAGACTAAAAGACCTG GTACTCACTAAAATGAAGAATCTACCCGTACTGGGAGAAATGTGATGGAC ACAGTGTGATCGTCATTTTACGGCCATTTTTTAGGCCGAGGTAAAATATC GGGCTGGTTAGGTAGCTTTGTACATTACCCCCAGGCTCGTTAATGCAACA GTCAGTCCTGGTCCTTGATCCAAGCTGTGCGCCGCCCTCCTCCCTCCCCC CAATAGGTGGCACCTCGACTATCTCCCCCTTACTCCAAGATGTACTTCGT GTGCACCTGGGCAGCATTCGCGTTCTCTCTGTTCTGGCTGAACCGATATT ACGGCCGGCGCGTATTCGAGGCAATCCCCAGGTGGGAAGAGGGTGTGCTG TGGAAGCGCGAAATTTGCGTCCGCGGTGGCACTACCACTACTGACGTGAA GTCGGGCGACAGCAAGAGGAAAGATCTGGCCTTGGCGATTACCTTGAACT GGAAGGCTTGCGTGGTGTTCACGTGTGGGTTTATCGGCGGTATCTTCAGC GCAATCTCCGGCAGGTTTGTTGTGCTTGTTTTTTGTTTTTTGTTTTTTGT TTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTGTT TTGTACGGTGTGCGTGATTGGTTTTTAGGTTGTGTCCGCAGGAATACGGT CGGTTTATTTGATGAAGTTAAGTCTTTTTGTTCGGCAGCTGTTGTGTATT TTCGTTTGTATTGTGCTTTGGACGGTGCTTGGCATTGCACGAGTCGTCAA GCGCTTTAACTACCTGTTGGCAAGGCCATAATCCGTCTTGCTTTCTCCCG GTCTGCCACCCGTACGGCACGTGGGTAGGCGTTAGCATTACTTAATGTAA CCTTGATCTAAAACGAAACTGTCGATGGGAAGCGGCAGCTCCTGTAATCG ACAAGTTTTGTATTCAAATGCCCTGCGCGATAAACCCCGTTTTCACGGCA CGCACTATTCCATTGCTATTTAAACCACAAACGCTAAGTACGCTACTGTT GGTATACTTGAGTGGTTCTTTGATCCATCCATTTCTGTTTTGAACATGAG TGCCATCTAACCCTTGTCCACTGCATGCTTGCGATTCATGTCCTCGGTGC GTCTCTTGGTTTCTTGTCCCCTTATCCTTGGTCTATCGTGTGTCTCGGAT GCTGTGCAACTGTTTACTTGCAGTGGGATAGATATCTGCACATTTTCAGT GCTGACCCTGCTATTCCGAGTGTCCGAAAAAATCGCAACCCCCACGAGTG TGGTTCTGATGGCGATCAATACCTTGGTTGGGTTCATCTACCGTCAGCTT GCCATGGGGGGAGTTGAAACCGAGGCTGTTCGGTTTTTCACCGTGTGTGT GCCCATCGTTGTTATCGGTAAGTGCTCGGAAGTATAAACCTGCTCGCTGT TTTGATGCGTAATAGGTTGTGCGCTTTGTGTTGGATGTATTTGGTATCGG TGTTGTGTGGGGTGTTTGGTGTCCGGTATCGCTGATGTGAGTTTTTTTGT ACTTGTCAGGTCGGATCTGACGAGTCAGATTAACATGTTCGAGGGTGCGC GGGGGGGGTTGTACTGTCCTGTTTGTACTACAAGCCTTGCTGCTGTGATG TCATACCTTTGTTTTTCGCACGTGTGCACATGGATCACGACTTGCGCTTT CGAAAAACAGCCTAGGGGAAATATGTCATGGTGCTGCATGGAGAAGAGCA AAATTGTATGCCACCTTTTTATGCTTTGCCATCAGCAAGTGTACATGTGC ATTCGAGGGATTTTCAATGCACATTGACTTGTGGAGTGTGTTTCTTTCTT TGGGATAGACATCACTCCACATGCGTCGCAAAATCAAACCAAGTTCTTGT CCCTCATCTTAATTATTCGTCGTCAGGCGCTCCGCTTGGCTCTTTGCTTG GGTCCCACTTTCACCGCCTGGTCCTAGCGTCATTCGTCTATGTAACCGAC GGGGTGCAGTTCATTGGCGCGCTTGCAGTTGTACAGCCCTGGTCTACACT CAAGACGGATACACCTCGGTGAGTGGCAAACGAATCTTCGGTGGTGGTTG CAAGGGTGTACTTTGGGGTCAGGATGGGGTATTTTTGCCTTCAAGGGTGA ACGGATAAATCGCGGAAAGTGTGCTAGTTGGACCCCGTACACAAAAATAA GTGAGAGAACTGGAGTGTGCGCTCCGCGAAAGTCTACTGTACACAGCGTC TGGTTGTTGTGTTGCGCTTGTAGCCGGCCGGTTATGTTTCTGTCCTAAAT TAGTGCTGACGTATTTGCCCCCGCTGGTTGGTGTCATTTTCCGTGTTGGA ATAGATCCTAGGGCTATGTACACAATTTTGGGTGAGTCGCGGCTGAGTTG ATCCCAACGTTTTAATAAACGTTGGCATTACTCAACGACATTTTTTTTTA TGAACAGGAATAACGTTGCAGCTTTCTCCAACCATCTAGGTCTATCACTC CTTGTTTTGGAGAACTAACTCTCTGTGAACATCATATGTGCGTGCTCCCT CACACTGCATCCGTACGTGCTTATGTTTCGGTTTGTGTTTTTTATTGGAA CAGGCACCTATGTCTTACATCGTTTGCGATCATCATCGGAGGAGGGGCTG TGTTTTCCGGCCTCGCAAAAGGTGGACACTACCTTCTTCGCAAATTGGAG GAGCAAGAAAAGGTTGAACTGGCAGCCTCCGGTCAACACGGTGAATCAAA GGTCAACTACTGGACCATCGAAGGCACGGTCTGAATCAGATCAAGACATG TTGAGTGCTACGGTGTATACGTGGCTTTTGTCCAGTCGTGTCTGGTGAGA CACGAGACCCGACTTTTGGCTTGTCATGACCATGGACAAGTCGGTTTTTC ACCTGGTTTTGTACTGACTGGGTTGTGCCTCGTGGCTTGGGGTTGACGAT CTAGTGAGTCAACGTTGTGGGCCGATAGGAGCATTCTAGGGGCCTAACTC CCTCGGCATCTCGAGATATCCGGTGATGTTGACATTGTTTTACCGATTTG TCTCTGTGAAGCATTTGACCATGCCTTGGAGGAATCGGACCCTGAGCTCA TGTTGGGTGATATCCGGTAGTCCAGTTGGGTTTCCAAATGTCTCGTTGAG ATACATACATGTTCATGTATGCATGCATAGATCCCTGAATGAGTGAAGTT TCCGGACGTATATGAAATACATCAAATAGCGAGTGTGCGAGATGATTGCA CCCATGAGTGCATTTCGGATCAGGACCATGTACTCTTGTACATACGTGAG GTTAGCGTCACTCGATTGGGACTACGTGTAGGGAGGTTTAGGTTCTTGGC CTGGGGTTCGAGGTGTAGTCTCTCCAGTCACGCGCTGCTTACGCACCGAA TGCTTTGATTTCTTTTTAGTTTTAATCACCGCAGAGCGTTTCTTGTTGTC TTGAGCGTTTGGTGTGTATGGTGCGTTTTCAAATTTGTAGTGTTGCTTGT GTCGTGTGAGGTACTGGTATGGGTGTCTTTTGGTGGCATGTTCGTTGTTG GATTTTCCTACATTGAGCTAAGCTGTGGTGTGTCTGTCAAAACGGGTTGT CTCTTGAAGGCAGATTTGATACACTCCGTTGGCGATTGTTTAATTTGACT GATTGTAGACTACTCGCCATCGTGACTTGCAGAACGATGATAACCATGTG GAGAGAAGGGATTTCGTGCCCGCAGTTTTCCTATCTGTCAATATTTTAAG GAGAAATTCGATGAATGAAAATTCCTGGTTGATGACTGAGGTGGAACTGC GGGCACTGAACCCCTTTGTCTCTACTCTTAGTCAAGTATTTCGTCGATAT TGAACATCGTCATTTTGCCGGCTTTCCAAGCAGGCGGTCAGCGTTGTGGA GTGAAAGGCTTGCTTGTTGCCGCAGTTTGTTCCCGTGATTTATTGTATTA TCGCATGGGGCACTTTTGATTGTGCCGCAAATTTTCGCATATGTCCGATG ATTTTGGCCCGGTCAGGTCGTGCGCACTACGTCTATCGGCTTAGTCCTCA CTCGAGAATATAGATGGTTGGTTTCCAGTGGGTGAATGGGGTAAAAACTA GGAAAGACAAAAGGGTATCCCAACCAAAGATAACTTTACTTGTGTATGTC GATCGTCGTACTTGGAAGGGGCATGTTGTAGTTATAGTGTTTCTATTTGT CTAGGTTGGTGCATTTCTGGTTCCTTACTACCGTGCATCCATAGCTATTG CCCTGTATCATCACTGGCTCGAGTCCTCCGCAGGTGTATTACTCGTACAT GCTGGTCGAGTGCATGTAAACGATACTCAATTGCTGGTCAAGTGTATACG TGCAGGTTCTACAGTTTTACCTACTTAGTTTACCCGCAATGAGAATAATT TGCTGAGGTGCAAGACAGCATTACGTATGATTTGTTTTCATCTTTTGCTA ATCCGATAGGCTGAAGGAAGATCGTAACAGCAAGTAAAGAATATCGTTTT TCTTGAGGAAATAAAGCAGTCAGCCCAGTTGTGATATGAGCGATATATTC CATCCCTAAAACCTTACTAACTTGAAATACTCTTGCTTCCAATAGGAACA GATCCCGATGCTTCTCGATAAAATGGGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5872:2015..11092-

>mRNA_H-paniculata_contig5872.13485.1 ID=mRNA_H-paniculata_contig5872.13485.1|Name=mRNA_H-paniculata_contig5872.13485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2706bp|location=Sequence derived from alignment at H-paniculata_contig5872:2015..11092- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGCCCGTGACCGCAGAGGCACAAGATGCTCCGCGGAGCAGCGGATG
CATGTCGATTGTTTCCAAGATTTGGGAAGGCCAGACGCTCCAGGAGAAGG
CTGCCGTCGACCCTAATGCTAGCTGATGCCGCCCGTGACCGCAGAGGCAC
AAGATGCTCCGCGGAGCAGCGGATGCATGTCGATTGTTTCCAAGATTTGG
GAAGGCCAGACGCTCCAGGAGAAGGCTGCCGTCGACCCTAATGCTAGCTG
GTTCACTCGCCACAGGCGTTTGATTGCTTTCGTCGCCCCCGCTACCATCG
CTAACATTATCTGGTGGAGCTATGCTGCGAGCAACCCGTCGACTTTCGAC
CTGTTCAATGACACCACAGGCGCCAAAGACACCCCCAACTGGTATATGTG
TGTGACGATGGTTTTTGGGTCCATGATAGCCGGAGCCACTAGTGAGGTTC
ACTCGCCACAGGCGTTTGATTGCTTTCGTCGCCCCCGCTACCATCGCTAA
CATTATCTGGTGGAGCTATGCTGCGAGCAACCCGTCGACTTTCGACCTGT
TCAATGACACCACAGGCGCCAAAGACACCCCCAACTGGTATATGTGTGTG
ACGATGGTTTTTGGGTCCATGATAGCCGGAGCCACTAGTGAGGGTGGTGC
AGCCGTAGCGTTTCCTGTAATGACGATCGCCTTCGGCATCCTCCCCTCCG
TGGCGCGAGACTTCTCGTTCATGATTCAAAGTGCCGGGATGACGTCTGCC
GCAGCCACGATAGCTTTGATGCGGGTGCAGGTGGAGATGCACTCGCTACT
CTGGTCCACCCTCGGCGGTATCTGCGGCATTGTGCTGGGCCTCGAACAGG
GTGGTGCAGCCGTAGCGTTTCCTGTAATGACGATCGCCTTCGGCATCCTC
CCCTCCGTGGCGCGAGACTTCTCGTTCATGATTCAAAGTGCCGGGATGAC
GTCTGCCGCAGCCACGATAGCTTTGATGCGGGTGCAGGTGGAGATGCACT
CGCTACTCTGGTCCACCCTCGGCGGTATCTGCGGCATTGTGCTGGGCCTC
GAACAGGTGGCACCTCGACTATCTCCCCCTTACTCCAAGATGTACTTCGT
GTGCACCTGGGCAGCATTCGCGTTCTCTCTGTTCTGGCTGAACCGATATT
ACGGCCGGCGCGTATTCGAGGCAATCCCCAGGTGGGAAGAGGGTGTGCTG
TGGAAGCGCGAAATTTGCGTCCGCGGTGGCACTACCACTACTGACGTGAA
GTCGGGCGACAGCAAGAGGAAAGATCTGGCCTTGGCGATTACCTTGAACT
GGAAGGCTTGCGTGGTGTTCACGTGTGGGTTTATCGGCGGTATCTTCAGC
GCAATCTCCGGCAGGTGGCACCTCGACTATCTCCCCCTTACTCCAAGATG
TACTTCGTGTGCACCTGGGCAGCATTCGCGTTCTCTCTGTTCTGGCTGAA
CCGATATTACGGCCGGCGCGTATTCGAGGCAATCCCCAGGTGGGAAGAGG
GTGTGCTGTGGAAGCGCGAAATTTGCGTCCGCGGTGGCACTACCACTACT
GACGTGAAGTCGGGCGACAGCAAGAGGAAAGATCTGGCCTTGGCGATTAC
CTTGAACTGGAAGGCTTGCGTGGTGTTCACGTGTGGGTTTATCGGCGGTA
TCTTCAGCGCAATCTCCGGCAGTGGGATAGATATCTGCACATTTTCAGTG
CTGACCCTGCTATTCCGAGTGTCCGAAAAAATCGCAACCCCCACGAGTGT
GGTTCTGATGGCGATCAATACCTTGGTTGGGTTCATCTACCGTCAGCTTG
CCATGGGGGGAGTTGAAACCGAGGCTGTTCGGTTTTTCACCGTGTGTGTG
CCCATCGTTGTTATCGTGGGATAGATATCTGCACATTTTCAGTGCTGACC
CTGCTATTCCGAGTGTCCGAAAAAATCGCAACCCCCACGAGTGTGGTTCT
GATGGCGATCAATACCTTGGTTGGGTTCATCTACCGTCAGCTTGCCATGG
GGGGAGTTGAAACCGAGGCTGTTCGGTTTTTCACCGTGTGTGTGCCCATC
GTTGTTATCGGCGCTCCGCTTGGCTCTTTGCTTGGGTCCCACTTTCACCG
CCTGGTCCTAGCGTCATTCGTCTATGTAACCGACGGGGTGCAGTTCATTG
GCGCGCTTGCAGTTGTACAGCCCTGGTCTACACTCAAGACGGATACACCT
CGGCGCTCCGCTTGGCTCTTTGCTTGGGTCCCACTTTCACCGCCTGGTCC
TAGCGTCATTCGTCTATGTAACCGACGGGGTGCAGTTCATTGGCGCGCTT
GCAGTTGTACAGCCCTGGTCTACACTCAAGACGGATACACCTCGGCACCT
ATGTCTTACATCGTTTGCGATCATCATCGGAGGAGGGGCTGTGTTTTCCG
GCCTCGCAAAAGGTGGACACTACCTTCTTCGCAAATTGGAGGAGCAAGAA
AAGGTTGAACTGGCAGCCTCCGGTCAACACGGTGAATCAAAGGTCAACTA
CTGGACCATCGAAGGCACGGTCTGAGCACCTATGTCTTACATCGTTTGCG
ATCATCATCGGAGGAGGGGCTGTGTTTTCCGGCCTCGCAAAAGGTGGACA
CTACCTTCTTCGCAAATTGGAGGAGCAAGAAAAGGTTGAACTGGCAGCCT
CCGGTCAACACGGTGAATCAAAGGTCAACTACTGGACCATCGAAGGCACG
GTCTGA
back to top