prot_H-paniculata_contig587.13482.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig587.13482.1
Unique Name	prot_H-paniculata_contig587.13482.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	195

Homology

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: D8LIB7_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB7_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 3.650e-107
Identity = 161/195 (82.56%), Postives = 175/195 (89.74%), Query Frame = 0

Query:    1 MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 195
            MFLHAGVVHFLFNMLGFLQVG MVERVFGWWRVA IYLV+G+FGTIVSAIFVP QVMVGASGAIFGVFGALWADLWQNWSV  ++C   TVL  LTA+N++LGLMPFLDNFAH GG++MG FMGLGLLVQKRED  G RL  KCYQ +LQLV+AVAVPTL+ILGLSLLYGRSDP EWCGWCE ISCVEFPPG++P
Sbjct:  482 MFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVASIYLVSGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLNKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSP 676

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A6H5JTL7_9PHAE (Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL7_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 4.820e-106
Identity = 161/197 (81.73%), Postives = 176/197 (89.34%), Query Frame = 0

Query:    1 MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQ--TLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 195
            MFLHAGVVHFLFNMLGFLQVG MVERVFGWWRVA IYLVAG+FGTIVSAIFVP QVMVGASGAIFGVFGALWADLWQNWSV  ++C   TVL  LTA+N++LGLMP+LDNFAH GG++MG FMGLGLLVQKRED  G RL+ KCYQ   +LQLV+AVAVPTL+ILGLSLLYGRSDP EWCGWCE ISCVEFPPG++P
Sbjct:  480 MFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGLMPYLDNFAHCGGMLMGLFMGLGLLVQKREDDRGYRLDKKCYQARVSLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSP 676

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A835YQV6_9STRA (Rhomboid-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV6_9STRA)

HSP 1 Score: 206 bits (523), Expect = 6.380e-63
Identity = 99/194 (51.03%), Postives = 137/194 (70.62%), Query Frame = 0

Query:    2 FLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDP--NEWCGWCEKISCVEFPPGN 193
            FLHAG++HF+FNML    +G ++ERVFG ++V +I++V+G+F T VSAIF+P QVMVGASGAI G+ G +WADL QNWS+      ++ VL  +TA+N++LGLMP+LDNFAH+GG++MGFF  L LLV + E + G  +     Q+ LQ +  V    LL+  L +L+G  +   NEWC WC  +SCVEFP G+
Sbjct:   53 FLHAGIIHFIFNMLALFSIGAVLERVFGGFKVLVIFIVSGVFSTAVSAIFLPYQVMVGASGAILGLLGGVWADLLQNWSLKQRPWVSIIVLFTITAVNLLLGLMPYLDNFAHMGGLVMGFFCSLPLLVMRAETAHGKLVAVSVRQRILQALGLVTSIALLVAALVVLFGSEEDSVNEWCSWCSNLSCVEFPKGD 246

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A7S3UQB1_HETAK (Rhomboid-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQB1_HETAK)

HSP 1 Score: 199 bits (505), Expect = 3.840e-58
Identity = 104/195 (53.33%), Postives = 128/195 (65.64%), Query Frame = 0

Query:    1 MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 195
            MFLH+G+VH +FNM G   +   +ER  GW R+ +IYL++GIFGT+ SAIFVP Q+MVGASGAIFG+ GA WADL QNWSV  +    L+ L FLTA N V G MP+LDNFAH GG++ G   GL LL Q R D FG     KCYQ  L  ++A+    LL+   + LY  +D    C  C K+SCVEFPPG  P
Sbjct:  234 MFLHSGLVHLVFNMTGLWYLVREMERTHGWQRLTVIYLLSGIFGTLCSAIFVPYQLMVGASGAIFGMVGARWADLIQNWSVLHKPWVELSFLFFLTASNYVFGFMPYLDNFAHTGGMVFGVLCGLVLLAQTRVDHFGFARGRKCYQTALATLAAMGTAALLMAATAWLYSSADVYAICPRCSKLSCVEFPPGAGP 428

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A7S2RTG0_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTG0_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.630e-55
Identity = 92/189 (48.68%), Postives = 128/189 (67.72%), Query Frame = 0

Query:    8 VHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLF-LTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 195
            +H+LFNM+    VG  +ER FG   +  I+LV+G  G I SAIF PL + VGASG +FG+FGA W+DL  N+S+Y  +   + V LF +T LN+++GL+P++DNFAHIGG++ G   G G+LV  R   +G   E K YQ  LQ++SAV +P L+++ L +LY   +P EWC WC  +SCV+FPPG NP
Sbjct:    1 IHWLFNMIALTAVGFPLERQFGSGALLYIFLVSGFMGNIFSAIFSPLTIGVGASGGVFGIFGAAWSDLILNYSLYKGRVCRIFVQLFCVTFLNLIVGLIPYVDNFAHIGGLLTGMIAGFGVLVANRYSRYGELKERKRYQLVLQIMSAVLIPVLIVVCLFVLY-LGEPGEWCSWCHYMSCVQFPPGPNP 188

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A2R5GUE1_9STRA (Rhomboid-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUE1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 9.050e-55
Identity = 95/195 (48.72%), Postives = 129/195 (66.15%), Query Frame = 0

Query:    2 FLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYS-EKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 195
            FLHAG++H+LFNM    Q+G  +E  FG    ALI L+ G  G + SAI  P+ V VGASGAIF +FG+ W++L  NWS+Y  + C ++T L+  TA+N++LGLMPFLDNFAHI G + G  +G G+LV  R   +G   E K YQ  LQ +S +  P L+++ L +LY   D +EWC WC  +SCV FPPG++P
Sbjct:  134 FLHAGILHYLFNMFALWQIGFPLENQFGSLAAALIILLGGFQGVVWSAILSPVTVGVGASGAIFALFGSAWSELILNWSLYKGQHCISITQLVLATAVNLMLGLMPFLDNFAHIAGFVTGILVGFGVLVSNRFTRWGELKERKRYQVVLQSLSVLITPLLVVVSLLVLYLGVDADEWCTWCRYLSCVPFPPGDSP 328

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A2R5H0C6_9STRA (Rhomboid-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H0C6_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.050e-49
Identity = 89/191 (46.60%), Postives = 124/191 (64.92%), Query Frame = 0

Query:    3 LHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKC-WALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPG 192
            LHAG VH LFN+L    +G  +ER FG  ++++I++ +GIFG ++SAIF+P Q+ VGASGA+FG+FGA W+DL  NWS+Y     W L  L+  T  N+ LGL+P+LDNFAH GG   G F+G  LLVQKR + +G   + K YQ  +Q ++ V +P L ++   +LY   +  + C WC  ISCV  P G
Sbjct:  197 LHAGFVHLLFNLLALYNIGFSMERDFGSLKISIIFIGSGIFGVLLSAIFLPQQLSVGASGALFGLFGAAWSDLLHNWSLYGNSAKWVLLQLVLATIFNLGLGLLPYLDNFAHFGGFCCGLFLGFTLLVQKRYNIWGDLQQRKTYQVVVQSLALVILPILFVVLTLVLYLDVNVADSCDWCSYISCVPLPIG 387

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A251UCK3_HELAN (RHOMBOID-like protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UCK3_HELAN)

HSP 1 Score: 159 bits (403), Expect = 3.230e-44
Identity = 81/198 (40.91%), Postives = 128/198 (64.65%), Query Frame = 0

Query:    1 MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKRED------SFGSRLET--KCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFP 190
            M+LHAGV H   NML  L VG  +E+ FG+ R+ L+Y+V+GI G+++S++F+   + VGASGA+FG+ GA+ ++L  NW++Y+ K  AL +L+ +  +N+++G++P +DNFAHIGG I GFF+G  LL + + D       +G  ++   K YQ  L ++S +A+  +   G   LY + D N +C WC  +SCV  P
Sbjct:  119 MWLHAGVFHIFTNMLSLLSVGIRLEQEFGFARIGLLYIVSGIGGSLLSSLFIRKTISVGASGALFGLLGAMLSELLTNWAIYANKVAALVMLVLMILMNLLVGILPHVDNFAHIGGFITGFFLGFILLARPQLDWIVPPGYYGHPMKPQYKLYQYVLIVLSVIALIVIFTTGFVFLYRKIDGNNYCSWCHYLSCVPTP 316

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A8B7BSV3_PHODC (RHOMBOID-like protein n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BSV3_PHODC)

HSP 1 Score: 159 bits (403), Expect = 5.020e-44
Identity = 81/199 (40.70%), Postives = 129/199 (64.82%), Query Frame = 0

Query:    1 MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKR------------EDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCV 187
            M+LHAGV+H L NML  L +G  +ER FG+ R+  +Y++AG+ G+++SA+F+   + VGASGA+FG+ GA+ ++L  NW++Y+ K  AL  L+ + A+N+ +G++P +DNFAHIGG I GFF+G  +L++ +              S   + + K YQ  L ++SA+A+    I+GL LL+   + N+ C WC  +SCV
Sbjct:  131 MWLHAGVIHILANMLSLLFIGIRLEREFGFVRIGPLYVIAGLGGSLLSALFIQASISVGASGALFGLLGAMLSELITNWTIYANKFAALLTLVVIIAINLAVGILPHVDNFAHIGGFITGFFLGFVILIRPQFGYISQKNAPLGYHSRSIKRKHKTYQYVLWIISAIALVVGFIVGLVLLFRGVNANDHCSWCHYLSCV 329

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BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: V4KD79_EUTSA (RHOMBOID-like protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KD79_EUTSA)

HSP 1 Score: 157 bits (397), Expect = 8.750e-44
Identity = 83/193 (43.01%), Postives = 127/193 (65.80%), Query Frame = 0

Query:    1 MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETK-------CYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISC 186
            M+LHAG++H L NML  + +G  +E+ FG+ RV LIYL++G  G+I+S++F+   + VGASGA+FG+ GA+ ++L  NW++Y+ K  AL  LLF+ A+N+ LGL+P +DNFAHIGG + GF +G  LL++ +     SR  T         YQ  L +V+AV +   L +GL +L+   + N+ C WC ++SC
Sbjct:  121 MWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGFGGSILSSLFLQESISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLGLGLLPRVDNFAHIGGFLTGFCLGFVLLLRPQYGWEASRTSTSRTKRKHSMYQYVLFVVAAVLLVVGLTVGLVMLFKGENGNKHCKWCHRLSC 313

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIB7_ECTSI	3.650e-107	82.56	Rhomboid-like protein n=1 Tax=Ectocarpus siliculos...	[more]
A0A6H5JTL7_9PHAE	4.820e-106	81.73	Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP ...	[more]
A0A835YQV6_9STRA	6.380e-63	51.03	Rhomboid-like protein n=1 Tax=Tribonema minus TaxI...	[more]
A0A7S3UQB1_HETAK	3.840e-58	53.33	Rhomboid-like protein n=1 Tax=Heterosigma akashiwo...	[more]
A0A7S2RTG0_9STRA	2.630e-55	48.68	Rhomboid-like protein (Fragment) n=1 Tax=labyrinth...	[more]
A0A2R5GUE1_9STRA	9.050e-55	48.72	Rhomboid-like protein n=1 Tax=Hondaea fermentalgia...	[more]
A0A2R5H0C6_9STRA	1.050e-49	46.60	Rhomboid-like protein n=1 Tax=Hondaea fermentalgia...	[more]
A0A251UCK3_HELAN	3.230e-44	40.91	RHOMBOID-like protein n=1 Tax=Helianthus annuus Ta...	[more]
A0A8B7BSV3_PHODC	5.020e-44	40.70	RHOMBOID-like protein n=1 Tax=Phoenix dactylifera ...	[more]
V4KD79_EUTSA	8.750e-44	43.01	RHOMBOID-like protein n=1 Tax=Eutrema salsugineum ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 1..130 e-value: 2.2E-33 score: 115.4
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 1..136 e-value: 4.8E-32 score: 113.0
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 1..188
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 87..105
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 111..129
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 106..110
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..30
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..75
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 170..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..169
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 130..148
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 76..86
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..51
None	No IPR available	SUPERFAMILY	144091	Rhomboid-like	coord: 1..132
None	No IPR available	TMHMM	TMhelix		coord: 86..108
None	No IPR available	TMHMM	TMhelix		coord: 149..171
None	No IPR available	TMHMM	TMhelix		coord: 56..73
None	No IPR available	TMHMM	TMhelix		coord: 5..22
None	No IPR available	TMHMM	TMhelix		coord: 112..129
None	No IPR available	TMHMM	TMhelix		coord: 29..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig587	contig	H-paniculata_contig587:32172..34663 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig587.13482.1	mRNA_H-paniculata_contig587.13482.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig587 32172..34675 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig587.13482.1 ID=prot_H-paniculata_contig587.13482.1|Name=mRNA_H-paniculata_contig587.13482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAI
FVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNV
VLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQ
LVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022764	Peptidase_S54_rhomboid_dom
IPR035952	Rhomboid-like_sf
IPR002610	Peptidase_S54_rhomboid