prot_H-paniculata_contig58689.13476.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig58689.13476.1
Unique Nameprot_H-paniculata_contig58689.13476.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME)

HSP 1 Score: 60.8 bits (146), Expect = 1.790e-7
Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   91 EIWICDNGATKHMTHDSDFLFNYQEC-DGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLG 168
            ++WI D+GA++HMTH S+++ N Q   D HV L DG +  + G G ++ Q   D + +   L  V ++P L+ +L S+G
Sbjct:  286 DVWILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: UPI000BBE966B (uncharacterized protein LOC106448712 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE966B)

HSP 1 Score: 57.4 bits (137), Expect = 3.100e-6
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 0
Query:   75 LSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFADFGNEY 177
            L +  E   N    G++  I D+GA+ HM  D   + N +   GHV +A+G+R+PI GVG L   F  DS+ + M        P  + +LLS+ K +D G EY
Sbjct:  396 LKMVKESPRNHIAQGIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSKALYM--------PEFTSNLLSV-KRSDNGGEY 488          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: UPI000BBECC90 (uncharacterized protein LOC106373021 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBECC90)

HSP 1 Score: 57.4 bits (137), Expect = 3.120e-6
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 0
Query:   75 LSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFADFGNEY 177
            L +  E   N    G++  I D+GA+ HM  D   + N +   GHV +A+G+R+PI GVG L   F  DS+ + M        P  + +LLS+ K +D G EY
Sbjct:  395 LKLVKESPRNHIAQGIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSKALYM--------PEFTSNLLSV-KRSDNGGEY 487          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: A0A5A7U112_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7U112_CUCME)

HSP 1 Score: 56.2 bits (134), Expect = 4.910e-6
Identity = 35/103 (33.98%), Postives = 52/103 (50.49%), Query Frame = 0
Query:   73 EVLSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGH-VRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFADFG 174
            EVL V    ++N        WI D+G   HMTH+ DFL N+Q+ D   V L D +   ++G G +  Q      ++ M LT V ++P L  +L+SL +    G
Sbjct:   55 EVLMVSHRDIQNA-------WIMDSGCMYHMTHNRDFLINFQKSDREKVLLGDNSTYDVKGTGSV--QIATHDRMIKM-LTNVRYVPELKRNLISLNELDKSG 147          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: UPI000BBEF31C (uncharacterized protein LOC111199942 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBEF31C)

HSP 1 Score: 56.6 bits (135), Expect = 5.410e-6
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 0
Query:   75 LSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFADFGNEY 177
            L +  E   N    G++  I D+GA+ HM  D   + N +   GHV +A+G+R+PI GVG L   F  DS+ + M        P  + +LLS+ K +D G EY
Sbjct:  381 LKLVKEPPRNHIAQGIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSKALYM--------PEFASNLLSV-KRSDNGGEY 473          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: A0A8D9D973_BRACM ((field mustard) hypothetical protein (Fragment) n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9D973_BRACM)

HSP 1 Score: 55.8 bits (133), Expect = 9.310e-6
Identity = 51/188 (27.13%), Postives = 88/188 (46.81%), Query Frame = 0
Query:    9 RRECPNVYCGRCGQRGHDLYACPEDACLAEAETEIELEEALKVDLGEDEFIAAYIASIFTTGKEEVLSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFA-DFGNEYRCSREGLRI-NLKTGRVL 194
            R E   +  G C    +   +      + + ET+   E   K D   DEF+  Y+ ++ TT ++   +  S    N+ +      I D+GA+ HM  D   + + ++  G V +A+G+R+PIEGVG L     FD +      +   ++P  + +LLS+ K   D G +     + +   +LKTGRV+
Sbjct:  234 RVEAQQILMGECSYSAYMGESVESSGVMKKLETKGADERVTKEDW--DEFVK-YVYALATTRRQGAPAKASTS--NKPI------IVDSGASHHMISDRSLMSDVKKATGGVMIANGDRIPIEGVGKLKL---FDKD------SDAFYMPQFASNLLSVRKATIDLGCQVVFRPDDVEFQDLKTGRVI 401          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: A0A5D3DBV2_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DBV2_CUCME)

HSP 1 Score: 53.5 bits (127), Expect = 2.480e-5
Identity = 30/97 (30.93%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   91 EIWICDNGATKHMTHDSDFLFNYQECD-GHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFADFGNEYRCSREGLRI 186
            + WI D+  T HMTH+ DFL N+Q+ D G + L D     ++G   +  Q     +++ + LT V ++P L  +L+SLG+    G   +   E +++
Sbjct:   54 DAWIMDSRCTFHMTHNLDFLINFQKSDRGTILLGDNGTCDVKGTCSV--QITTHDKMIRI-LTNVRYVPKLKCNLISLGELDRSGCTIKSENEVMKV 147          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: UPI00142DEC76 (uncharacterized protein LOC103873924 isoform X1 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142DEC76)

HSP 1 Score: 54.7 bits (130), Expect = 2.490e-5
Identity = 34/106 (32.08%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   75 LSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFADFGNEYRCS 180
            L + S+   N    G++  I D+GA+ HM  D   + N +   GHV +A+G+R+PI GVG L   F  DS+ +        +IP  + +LLS+ +     N+ +C+
Sbjct:  400 LKLVSKSPRNHIAQGIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKM-FNKDSKAL--------YIPEFTSNLLSVKRCT---NDLQCN 493          
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Match: UPI0006AB2FB3 (uncharacterized protein LOC106407804 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB2FB3)

HSP 1 Score: 53.5 bits (127), Expect = 5.670e-5
Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 0
Query:   75 LSVDSEGLENRKVGGMEIWICDNGATKHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMKLTQVAFIPLLSHHLLSLGKFAD 172
            L +  E   N    G++  I D+GA+ HM  D   + N +   GHV +A+G+R+PI GVG L   F  DS+ + M        P  + +LLS+ +  D
Sbjct:  400 LKLIKEPPRNHIAQGIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSKALYM--------PEFTSNLLSVKRCTD 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58689.13476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A151ITN2_9HYME1.790e-736.71Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
UPI000BBE966B3.100e-635.92uncharacterized protein LOC106448712 n=1 Tax=Brass... [more]
UPI000BBECC903.120e-635.92uncharacterized protein LOC106373021 n=1 Tax=Brass... [more]
A0A5A7U112_CUCME4.910e-633.98Retrovirus-related Pol polyprotein from transposon... [more]
UPI000BBEF31C5.410e-635.92uncharacterized protein LOC111199942 n=1 Tax=Brass... [more]
A0A8D9D973_BRACM9.310e-627.13(field mustard) hypothetical protein (Fragment) n=... [more]
A0A5D3DBV2_CUCME2.480e-530.93Retrovirus-related Pol polyprotein from transposon... [more]
UPI00142DEC762.490e-532.08uncharacterized protein LOC103873924 isoform X1 n=... [more]
UPI0006AB2FB35.670e-533.67uncharacterized protein LOC106407804 n=1 Tax=Brass... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableGENE3D4.10.60.10coord: 1..34
e-value: 1.8E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig58689contigH-paniculata_contig58689:214..798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig58689.13476.1mRNA_H-paniculata_contig58689.13476.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig58689 214..798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig58689.13476.1 ID=prot_H-paniculata_contig58689.13476.1|Name=mRNA_H-paniculata_contig58689.13476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
ICRSKDHLRRECPNVYCGRCGQRGHDLYACPEDACLAEAETEIELEEALK
VDLGEDEFIAAYIASIFTTGKEEVLSVDSEGLENRKVGGMEIWICDNGAT
KHMTHDSDFLFNYQECDGHVRLADGNRLPIEGVGMLFFQFRFDSEVVLMK
LTQVAFIPLLSHHLLSLGKFADFGNEYRCSREGLRINLKTGRVLS
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