mRNA_H-paniculata_contig5867.13468.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 245 bits (626), Expect = 8.620e-76 Identity = 119/192 (61.98%), Postives = 143/192 (74.48%), Query Frame = 1
Query: 190 LYPR------KQLAVSVEV-----VVDYRQCEWRVRASPNGTLRDLETNKDYPYLFWEADSGDGRVVQSFNLSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGLATYDACLDTAELNDLQAPPRKGFVAVEWGGMNLNGTA 732
LYP+ KQLA E V +QC+W V ASP G+L+DL T ++YPYLFWEADS DGRV +SF L G+ SFCVAG AG FLD+AL RLGLN +ERCDM+T WL QLE+ F IYFV+V+RY QAA+L+IVP PDV IRVFMAFRG YDA LDTA++ +L++P R+GFVAVEWGGMNLNG +
Sbjct: 260 LYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVS 451
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: D7FN69_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN69_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.820e-42 Identity = 79/167 (47.31%), Postives = 103/167 (61.68%), Query Frame = 1
Query: 1 PSDTVGKIKKMYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYPRKQLAVSVEVVVDYRQCEWRVRASPNGTLRDLETNKDYPYLFWEADSGDGRVVQSFNLSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLE 501
PS+TV +K+ + G PP+QQ+ +F K LE+D + + L L G P L R+ +V + CEW V A+P+G+L D+ T+++YPYLFWEADS DG V +F L T SFCVAGN AG FLD+AL RLGLN +ERCD+ITYWL QLE
Sbjct: 3 PSNTVLDLKRKVQEEEGIPPDQQKAVFAGKLLENDRTMPEPT----------LELLGAVPQTLDEERQTSGYEA-IVASGQHCEWIVHANPDGSLTDISTSREYPYLFWEADSTDGLVCGNFGLEKTPSFCVAGNDAGLFLDVALERLGLNVRERCDVITYWLPQLE 158
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: A0A0K6FPD1_9AGAM (Polyubiquitin-C n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6FPD1_9AGAM) HSP 1 Score: 157 bits (398), Expect = 7.210e-42 Identity = 106/298 (35.57%), Postives = 144/298 (48.32%), Query Frame = 1
Query: 4 SDTVGKIKKMYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYP-------RKQLAVS-----------VEVVVDYRQCE-------WRVRASPNGTLRDLETNKDYPYLFWEADSG------------DGRVVQSFN-----LSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRG--------------LATYDACL--DTAELNDLQAPPRKGFVAVEWGGMNLN 723
SDT+ IK ++ G PP++QRLIF KQLED LSDYN++ T HLV RL GGKPVI L+P R QL+++ + ++ + W V A P+GTL D TN++ YLFWEA + V +F+ L + S + NK ++D AL LGL+T+ R ITYWL L + F A+ F+ Y AA L + PAP V+ RVFM FRG +A D + D ++ Q + F VEWGGM +N
Sbjct: 171 SDTIDNIKASIQNRTGMPPDEQRLIFAGKQLEDGRTLSDYNIQRETTLHLVKRLRGGKPVIYLFPPSSTSDIRVQLSLARSWDFSEIYPPTTITTAAKETKSLGQSVAWTVNAQPDGTLWDQATNREVSYLFWEARTNPKLPSSPPTTRPSSPVEANFDPASPLLLPSHSALLPFNKVTGYIDDALLALGLHTEARTSFITYWLPDLSKHAFIALRFLPQHEYENAAPLDVSPAPQVVTRVFMLFRGVDESQVELWNEAAEMAQRDVVVWRDVVGVDIAQVRDKLLFRVVEWGGMEVN 468
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: A0A8H3GSI3_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3GSI3_9AGAM) HSP 1 Score: 154 bits (389), Expect = 5.630e-40 Identity = 101/300 (33.67%), Postives = 144/300 (48.00%), Query Frame = 1
Query: 4 SDTVGKIKKMYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYPR---KQLAVSVEVVVDY----------------------RQCEWRVRASPNGTLRDLETNKDYPYLFWEADSGDGRVVQ---------------SFN-----LSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGL----------ATYDACLDTAELNDL------QAPPRKGFVAVEWGGMNL 720
SDTV +K + G PP+QQRLIF KQLED+ L +Y V G+ HLV RL GGKPVI ++P K + V + + + + WRV A PNGTL D T+++ YLFWEA + + +F+ L + S + K ++D L LGL+T+ R ITYWL QL + F A+ F+ + Y +AA L+I PAP+VI RVFM F+G+ A AC+D + ++ + + F +EWGGM +
Sbjct: 262 SDTVDILKARIQDKAGIPPDQQRLIFSGKQLEDERTLHEYGVTAGSFLHLVSRLKGGKPVIYIFPANTMKDIQVHLSLTQGWSFSGIYPPTNITTISDNSMGLGQNINWRVDAKPNGTLLDHTTHREVTYLFWEAQTNPKSLFSPPATRPSTPTEMSTLAFDPASPILLPSQSALLPCEKVTNYIDDVLLTLGLHTEARTSFITYWLPQLSNHAFVALRFLAQEDYEKAAPLNITPAPEVIARVFMLFKGIEESEIGLWSEAAARACMDVSMWRNIVGIDVAKVHDKSLFRVLEWGGMEV 561
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: D7FJP3_ECTSI (Ubiquitin fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI) HSP 1 Score: 136 bits (343), Expect = 9.640e-38 Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 457 QERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGLATYDACLDTAELNDLQAPPRKGFVAVEWGGMNLN 723
+ERCDM+TYWL QLE+ F IYFV+V+RY +AA+L+I PAPDV IR+FMAFRG+ YD LDTA++ DL+AP RKGFVAVEWGGMNLN
Sbjct: 2 RERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFRGIDAYDKELDTAKMEDLRAPGRKGFVAVEWGGMNLN 90
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: A0A8H8P4X4_9AGAM (Ubiquitin family protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8P4X4_9AGAM) HSP 1 Score: 144 bits (363), Expect = 1.410e-36 Identity = 90/277 (32.49%), Postives = 133/277 (48.01%), Query Frame = 1
Query: 4 SDTVGKIKKMYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYPR---KQLAVSVEVVVDYRQCEWRVRASPNGTLRDLETNKDYPYLFWEADSGD----------GRVVQSFNLS---------GTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGL----------ATYDACLDTAELNDL------QAPPRKGFVAVEWGGMNL 720
SDT+ +K + G P QRLI +QLED L DYN++ + HLV RL GGKP+I ++P K + V + + + +W V A P+GTL D N++ YLFWEA + G V+ L+ + S + +K ++D L G + + R ITYWL L + + ++ F+ + Y +AA L+I PAP+VI RVFM FRG+ A AC D D+ + R + +EWGGM +
Sbjct: 228 SDTIASLKSKIQDREGIPTNHQRLIMAGRQLEDKATLMDYNIQHESIVHLVCRLVGGKPIIYIFPASTVKDVRVHLSTLTGGQTIDWTVDAKPDGTLFDKVANREVAYLFWEAHTSPRLPSPPVTRPGTPVEISALTFDPSSPVLLSSQSALLPFDKITGYIDDVLLAPGFHLEARTSFITYWLPSLSRHAYVSLRFLPQEEYEKAAPLNITPAPEVITRVFMLFRGVEESQVEFWSDAAGMACQDVTVWRDVVGVDIEKTLNRSLYRVLEWGGMEV 504
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: A2FER7_TRIVA (Ubiquitin family protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2FER7_TRIVA) HSP 1 Score: 141 bits (356), Expect = 2.250e-36 Identity = 88/244 (36.07%), Postives = 123/244 (50.41%), Query Frame = 1
Query: 13 VGKIKKMYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYPRKQLAVSVEVVV---DY--------RQCEWRVRASPNGTLRDLETNKDYPYLFWEADSGDGRVVQSFNLSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGLATYDACLDTAELNDLQAPPRKGFVAVEWGG 711
VG +K M K G P+QQRLIF+ KQ+ED+ L DYNV DG T +L+LRL GGKPVI LYP++++ V + + D+ + W V+A P+G + + K YLFWE + NL+ F + G + F + L + LN E CD ITYW +L Y + + F + + +++ P PD I RVF F L C E +L R GF +EWGG
Sbjct: 151 VGYLKDMIKEKEGICPDQQRLIFKGKQMEDENTLMDYNVHDGDTINLILRLRGGKPVIYLYPKEEIDAKVSIKINDGDFSFVYPSFDKDNTWNVKALPSGEI--VHRGKKMRYLFWE-------TLFYPNLNMDKGFIIKGEDSVSFFEDKLKFMNLNDAEICDFITYWCPKLCGYKYVKVCF-HFENFDDMCPMNVEPKPDNINRVF--FAALPLESPC--DIEPQELPTFNRDGFTVIEWGG 380
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: A0A165KQJ3_EXIGL (Ubiquitin-domain-containing protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165KQJ3_EXIGL) HSP 1 Score: 138 bits (348), Expect = 2.730e-36 Identity = 92/271 (33.95%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 55 PPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYPRKQLAVSVEV-------------VVDY--------RQCEWRVRAS-PNGTLRDLETNKDYPYLFWEADSGDGRV---------VQSFN-----LSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGLATYDACL-------------DTAELNDLQAPPRKGFVAVEWGGMNL 720
PP+QQRLI+ KQLED +SDYN++ GAT LV RL GGKPV+ L+ + SV + VD + +W V + P+G L D +T ++ YLFWEA S V +FN ++ +S +A +L AL L L+ + R ITYWL ++A+ A+ F+ Y +AA L + PAPD++ RVFM FRGL+ DA D + +A F +EWGGM +
Sbjct: 2 PPDQQRLIYAGKQLEDGRTISDYNIRRGATITLVSRLRGGKPVVYLFAPSPTSASVSLSLVPEWSFSCVYPTVDIVPSVNGKGQAVQWDVNVNGPDGVLVDKQTGQEEAYLFWEALSNPSAVDTPPASPTLPAAFNPARPVINPQNSVVLAVADVPAYLQAALKALCLHVEARTSFITYWLPHIQAHTHIALRFLPQDEYERAAPLDVTPAPDIVTRVFMLFRGLSAQDAGAWRAAQFVEAHVWKDVVGVETDKALDASLFRVLEWGGMEV 272
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: A0A4Q2D1A5_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2D1A5_9AGAR) HSP 1 Score: 139 bits (351), Expect = 2.900e-35 Identity = 84/249 (33.73%), Postives = 124/249 (49.80%), Query Frame = 1
Query: 4 SDTVGKIKKMYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPVILLYPRKQLAVSVEVVV-------------------DYRQCEWRVRASPNGTLRDLETNKDYPYLFWEADSGD---------------GRVVQSF-----NLSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGLATYD 633
SDTV +K + G PE QRLI+ +QL DD L+ ++ GA HLVLR GGKPVI LYP VS ++ + ++ EW V ASPNGTL+++ T+ + YL+WEA++ V ++F L+ +S + K +LD +L LGL+ + R ITYWL + + A+ F+ Y +AA L++ P PDV+ R+FM F+G+ D
Sbjct: 145 SDTVANLKAKVEDQDGTLPEDQRLIYAGRQLADDPTLAACGIQSGAMIHLVLRQRGGKPVIYLYPPSATRVSTKLSLVPEWEFSAIYPVVPAKTTPQGQELEWVVDASPNGTLKEVNTDLEVSYLYWEAETNTHNLLSPPPSPSLIPTSNVDETFVPNRATLNAKNSVLLEVKKITPYLDTSLKALGLHVEARTSFITYWLPSILKHKHVALRFLPQSAYERAAPLNLDPTPDVVARIFMLFKGVEEED 393
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Match: R5AD22_9CLOT (Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 TaxID=1262769 RepID=R5AD22_9CLOT) HSP 1 Score: 132 bits (333), Expect = 1.120e-34 Identity = 81/192 (42.19%), Postives = 111/192 (57.81%), Query Frame = 1
Query: 175 KPVILLYPRKQLAVSVEVVVDYR----------QCEWRVRASPNGTLRDLETNKDYPYLFWEADSGDGRVVQSFNLSGTSSFCVAGNKAGEFLDIALTRLGLNTQERCDMITYWLAQLEAYPFTAIYFVDVQRYAQAAKLSIVPAPDVIIRVFMAFRGLATYDACLDTAELNDLQAPPRKGFVAVEWGGMNL 720
KPVI LYP ++ V+V++ DY Q W V ASP+GTL D + + Y YL+WE G+ +V F+ FCVAG FL+ AL+RLGL +E + I YWL Q+E P+ I F Y +AAKLS+ PAPD ++RVFMA++ L + L+ + +L AP R+GF AVEWGG +
Sbjct: 41 KPVIYLYPEEETQVAVKL--DYAGELTCTYPAYQDGWTVTASPDGTLTDAD-GQTYNYLYWE---GEDQVEYDFS----QGFCVAGEDTASFLEDALSRLGLTRKEANEFIVYWLPQMEENPYNLIAFQS-DAYTEAAKLSMEPAPDTLLRVFMAWKPL---EEPLEIP-VQELTAPERRGFTAVEWGGCQV 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5867.13468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5867.13468.1 >prot_H-paniculata_contig5867.13468.1 ID=prot_H-paniculata_contig5867.13468.1|Name=mRNA_H-paniculata_contig5867.13468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp MYKSIRGPPPEQQRLIFEYKQLEDDWILSDYNVKDGATFHLVLRLTGGKPback to top mRNA from alignment at H-paniculata_contig5867:8452..10401- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5867.13468.1 ID=mRNA_H-paniculata_contig5867.13468.1|Name=mRNA_H-paniculata_contig5867.13468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig5867:8452..10401- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5867:8452..10401- >mRNA_H-paniculata_contig5867.13468.1 ID=mRNA_H-paniculata_contig5867.13468.1|Name=mRNA_H-paniculata_contig5867.13468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at H-paniculata_contig5867:8452..10401- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |