mRNA_H-paniculata_contig586.13462.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig586.13462.1
Unique NamemRNA_H-paniculata_contig586.13462.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: D8LTF7_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF7_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 4.990e-90
Identity = 134/152 (88.16%), Postives = 145/152 (95.39%), Query Frame = 3 
Query:  246 SVELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWFR 701
            +V LVEYEDERQL  IM+LVDRDLSEPYSIFTYRYFLHNWP LCFVA+ GERTVGSIVCKAE+E++DDP TGYIAMLAVDT++RKHGIGTALAS+AIEAMRDLGC+EVVLETEVTNGGALNLYTKLGFSKNERL KYYLNGVDA+RLKLWFR
Sbjct:   19 AVRLVEYEDERQLSDIMALVDRDLSEPYSIFTYRYFLHNWPGLCFVAKAGERTVGSIVCKAEREVEDDPLTGYIAMLAVDTSFRKHGIGTALASKAIEAMRDLGCEEVVLETEVTNGGALNLYTKLGFSKNERLMKYYLNGVDAFRLKLWFR 170
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A836CGR4_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGR4_9STRA)

HSP 1 Score: 206 bits (524), Expect = 4.360e-61
Identity = 102/153 (66.67%), Postives = 120/153 (78.43%), Query Frame = 3 
Query:  243 PSVELVE--YEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLW 695
            P VE+V   Y  E++L  IM+LVDRDLSEPY+IFTYRYFL+NWP LCFVA  G+   G +VCKAE++ D+  Y GYIAMLAV+T YR HGIGT L +RAI+AM  LGCDEV LETEVTN  AL LY +LGF + ERL +YYLNGVDA+RLKLW
Sbjct:   17 PKVEIVYEVYGGEQRLGDIMALVDRDLSEPYNIFTYRYFLNNWPELCFVALAGQDIAGVVVCKAERDQDER-YCGYIAMLAVETDYRHHGIGTKLVARAIQAMHKLGCDEVALETEVTNQAALRLYERLGFMREERLMRYYLNGVDAFRLKLW 168
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A4P9Y2M0_9FUNG (Acyl-CoA N-acyltransferase n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y2M0_9FUNG)

HSP 1 Score: 197 bits (500), Expect = 3.380e-57
Identity = 96/171 (56.14%), Postives = 125/171 (73.10%), Query Frame = 3 
Query:  249 VELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWFR*QGFRVSSYVLQELGTQQHT 761
            ++  +Y DE+QL  IM+L+ +DLSEPYSI+TYRYFLH+WP+LCF+A V E  +G+I+C+  +    D   GYIAMLAV TT RK GIGT L  RAIE MR LG DE+VLETE TN GAL+LY +LGF++++RL++YYLNGVDA+RLKLW      R S   ++    Q+ T
Sbjct:   15 IQYEQYRDEKQLPAIMALIAKDLSEPYSIYTYRYFLHSWPSLCFLANVEEGCIGTIICRLAEH--GDVQRGYIAMLAVSTTQRKRGIGTQLVERAIEEMRRLGADEIVLETETTNRGALHLYERLGFARDKRLHRYYLNGVDAFRLKLWTSSSILRASQLRVRAKDDQEDT 183
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A137PI95_CONC2 (Putative acyltransfersase n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PI95_CONC2)

HSP 1 Score: 194 bits (492), Expect = 2.560e-56
Identity = 94/147 (63.95%), Postives = 118/147 (80.27%), Query Frame = 3 
Query:  252 ELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKL 692
            ELV Y+DE QL+ I+ L+ +DLSEPYSI+TYRYFLHNWPNLCF+A++GE  VG IVCK ++        GYIAMLAVD TYR   IG++L  R+I AM +LG DE+VLETE+TN GALNLY KLGF +++RL++YYLNG+DA+RLKL
Sbjct:   28 ELVHYKDESQLNEIIRLIHKDLSEPYSIYTYRYFLHNWPNLCFLAKIGEEFVGVIVCKLDRHKLK--LRGYIAMLAVDKTYRNLSIGSSLVRRSISAMMELGADEIVLETELTNVGALNLYEKLGFIRDKRLHRYYLNGMDAFRLKL 172
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A024TMW3_9STRA (N-acetyltransferase domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TMW3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.180e-54
Identity = 90/150 (60.00%), Postives = 113/150 (75.33%), Query Frame = 3 
Query:  246 SVELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLW 695
            S+E  +YE E +L  +M+L ++DLSEPYS++TYRYFL++WP LC +AR G   VG+IVC+ EK        GYIAMLAVD  +RKHGIG++L  +AI+ M  L CDEVVLETE+TN  A+ LY  LGF K+ERL KYYLNGVDA+RLKLW
Sbjct:    2 SIEYAKYESEHELGDLMALFEKDLSEPYSVYTYRYFLYSWPELCILARSGGTVVGAIVCRLEKS--PGVLKGYIAMLAVDKAFRKHGIGSSLVKKAIDQMIQLECDEVVLETEITNVAAIRLYQNLGFVKDERLLKYYLNGVDAFRLKLW 149
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A7S2RLV8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLV8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 8.410e-54
Identity = 91/153 (59.48%), Postives = 118/153 (77.12%), Query Frame = 3 
Query:  249 VELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAEKEMD---DDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWF 698
            V+ V Y+DE QL  IM+L+D++LSEPYSIFTYR+FLH WP LC  A VG+  VG ++CKAE+E D   +  YTGYIAMLAV   +RK GIG++L   A++ M+DLGCD+ +LETEV+N  AL LY +LGF ++ERL KYY+NG DA+RL+LWF
Sbjct:   26 VQYVSYKDETQLPEIMALMDQELSEPYSIFTYRFFLHKWPGLCVRALVGDEMVGVVICKAEQEPDRHGNMAYTGYIAMLAVSDQHRKKGIGSSLVRLAMQRMKDLGCDQAMLETEVSNTKALRLYDRLGFLRDERLVKYYMNGGDAFRLRLWF 178
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A0N4V884_ENTVE (N-acetyltransferase domain-containing protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V884_ENTVE)

HSP 1 Score: 189 bits (480), Expect = 1.330e-53
Identity = 104/190 (54.74%), Postives = 133/190 (70.00%), Query Frame = 3 
Query:  138 ETFKGEDAEPRPSNAGADGGRSTPMEVGASSEAKMPSVELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVA---RVGERTVGSIVCKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWF 698
            E FK E+A P  + AG+    +   E  A        +++V+YEDERQ+  IM L+ +DLSEPYSI+TYRYF+HNWP+LCF+A   RV E  VG+I+CK ++ +      GYIAMLAVD + RK GIGT L  RAI  MR +GCDEVVLETEVTN  A+ LY+ LGF + +RL +YYLNGVDA+RLKL+F
Sbjct:   42 EHFKHEEALPS-AVAGSLNAETRENETSAQISYPPEYIKIVDYEDERQMGSIMRLITKDLSEPYSIYTYRYFIHNWPSLCFLALDTRVNE-FVGAIICKLDRNLLKRR-RGYIAMLAVDKSCRKMGIGTCLVQRAIGNMRKMGCDEVVLETEVTNSDAMRLYSNLGFIREKRLFRYYLNGVDAFRLKLFF 228
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BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A6P3I4Y0_BISBI (N-alpha-acetyltransferase 30 n=3 Tax=Bovinae TaxID=27592 RepID=A0A6P3I4Y0_BISBI)

HSP 1 Score: 186 bits (473), Expect = 1.620e-53
Identity = 94/154 (61.04%), Postives = 115/154 (74.68%), Query Frame = 3 
Query:  246 SVELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAE--KEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWFR 701
            ++  V YE E Q+  IM L+ +DLSEPYSI+TYRYF+HNWP LCF+A VGE  VG+IVCK +  K+M      GYIAMLAVD+ YR++GIGT L  +AI AM +  CDEVVLETE+TN  AL LY  LGF +++RL +YYLNGVDA RLKLW R
Sbjct:   21 TIRYVRYESELQMPDIMRLITKDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFR---RGYIAMLAVDSKYRRNGIGTNLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWLR 171
[Close]
BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: W5QIX8_SHEEP (N-acetyltransferase domain-containing protein n=3 Tax=Boreoeutheria TaxID=1437010 RepID=W5QIX8_SHEEP)

HSP 1 Score: 186 bits (473), Expect = 1.960e-53
Identity = 94/154 (61.04%), Postives = 115/154 (74.68%), Query Frame = 3 
Query:  246 SVELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAE--KEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWFR 701
            ++  V YE E Q+  IM L+ +DLSEPYSI+TYRYF+HNWP LCF+A VGE  VG+IVCK +  K+M      GYIAMLAVD+ YR++GIGT L  +AI AM +  CDEVVLETE+TN  AL LY  LGF +++RL +YYLNGVDA RLKLW R
Sbjct:   27 TIRYVRYESELQMPDIMRLITKDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFR---RGYIAMLAVDSKYRRNGIGTNLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWLR 177
[Close]
BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Match: A0A1U7SJM5_ALLSI (N-alpha-acetyltransferase 30 n=2 Tax=Crocodylia TaxID=1294634 RepID=A0A1U7SJM5_ALLSI)

HSP 1 Score: 187 bits (476), Expect = 2.480e-53
Identity = 95/155 (61.29%), Postives = 115/155 (74.19%), Query Frame = 3 
Query:  243 PSVELVEYEDERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIVCKAE--KEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEVVLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWFR 701
            P++  V YE E Q+  IM L+ +DLSEPYSI+TYRYF+HNWP LCF+A VGE  VG+IVCK +  K+M      GYIAMLAVD+ YR+ GIGT L  +AI AM +  CDEVVLETE+TN  AL LY  LGF +++RL +YYLNGVDA RLKLW R
Sbjct:   66 PTIGYVRYESELQMPDIMRLITKDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFR---RGYIAMLAVDSKYRRKGIGTNLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWLR 217
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig586.13462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTF7_ECTSI4.990e-9088.16N-acetyltransferase domain-containing protein n=2 ... [more]
A0A836CGR4_9STRA4.360e-6166.67Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
A0A4P9Y2M0_9FUNG3.380e-5756.14Acyl-CoA N-acyltransferase n=1 Tax=Piptocephalis c... [more]
A0A137PI95_CONC22.560e-5663.95Putative acyltransfersase n=1 Tax=Conidiobolus cor... [more]
A0A024TMW3_9STRA2.180e-5460.00N-acetyltransferase domain-containing protein n=5 ... [more]
A0A7S2RLV8_9STRA8.410e-5459.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0N4V884_ENTVE1.330e-5354.74N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6P3I4Y0_BISBI1.620e-5361.04N-alpha-acetyltransferase 30 n=3 Tax=Bovinae TaxID... [more]
W5QIX8_SHEEP1.960e-5361.04N-acetyltransferase domain-containing protein n=3 ... [more]
A0A1U7SJM5_ALLSI2.480e-5361.29N-alpha-acetyltransferase 30 n=2 Tax=Crocodylia Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig586contigH-paniculata_contig586:12032..17665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.1
Seed ortholog evalue9.8e-74
Seed eggNOG ortholog2880.D8LTF7
Preferred nameNAA30
KEGG koko:K00670,ko:K03549
KEGG TC2.A.72
Hectar predicted targeting categoryother localisation
GOsGO:0002119,GO:0002164,GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0009791,GO:0009987,GO:0010467,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018205,GO:0018206,GO:0018393,GO:0018394,GO:0019538,GO:0031248,GO:0031365,GO:0031414,GO:0031417,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0034212,GO:0036211,GO:0040024,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048856,GO:0050789,GO:0051276,GO:0051604,GO:0065007,GO:0071704,GO:0071840,GO:1901564,GO:1902493,GO:1902494,GO:1990234
EggNOG free text desc.N-acetyltransferase activity
EggNOG OGsCOG0456@1,KOG3139@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-02_006170.1
EC2.3.1.256
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02000,ko04131
Exons5
Model size1424
Cds size585
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930637.4352605-UTR-H-paniculata_contig586:12031..127511622930637.4352605-UTR-H-paniculata_contig586:12031..12751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig586 12032..12751 -
1691481383.771736-UTR-H-paniculata_contig586:12031..127511691481383.771736-UTR-H-paniculata_contig586:12031..12751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig586 12032..12751 -
1622930637.5484035-UTR-H-paniculata_contig586:17546..176651622930637.5484035-UTR-H-paniculata_contig586:17546..17665Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig586 17547..17665 -
1691481383.8292892-UTR-H-paniculata_contig586:17546..176651691481383.8292892-UTR-H-paniculata_contig586:17546..17665Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig586 17547..17665 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930637.4607282-CDS-H-paniculata_contig586:12751..128891622930637.4607282-CDS-H-paniculata_contig586:12751..12889Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 12752..12889 -
1691481383.7822032-CDS-H-paniculata_contig586:12751..128891691481383.7822032-CDS-H-paniculata_contig586:12751..12889Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 12752..12889 -
1622930637.4783428-CDS-H-paniculata_contig586:14417..144731622930637.4783428-CDS-H-paniculata_contig586:14417..14473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 14418..14473 -
1691481383.789824-CDS-H-paniculata_contig586:14417..144731691481383.789824-CDS-H-paniculata_contig586:14417..14473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 14418..14473 -
1622930637.494666-CDS-H-paniculata_contig586:14791..149181622930637.494666-CDS-H-paniculata_contig586:14791..14918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 14792..14918 -
1691481383.8008149-CDS-H-paniculata_contig586:14791..149181691481383.8008149-CDS-H-paniculata_contig586:14791..14918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 14792..14918 -
1622930637.5103898-CDS-H-paniculata_contig586:15460..157181622930637.5103898-CDS-H-paniculata_contig586:15460..15718Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 15461..15718 -
1691481383.8101075-CDS-H-paniculata_contig586:15460..157181691481383.8101075-CDS-H-paniculata_contig586:15460..15718Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 15461..15718 -
1622930637.5307937-CDS-H-paniculata_contig586:17540..175461622930637.5307937-CDS-H-paniculata_contig586:17540..17546Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 17541..17546 -
1691481383.819484-CDS-H-paniculata_contig586:17540..175461691481383.819484-CDS-H-paniculata_contig586:17540..17546Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig586 17541..17546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig586.13462.1prot_H-paniculata_contig586.13462.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig586 12752..17546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig586.13462.1

>prot_H-paniculata_contig586.13462.1 ID=prot_H-paniculata_contig586.13462.1|Name=mRNA_H-paniculata_contig586.13462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MVVVAAETFKGEDAEPRPSNAGADGGRSTPMEVGASSEAKMPSVELVEYE
DERQLDGIMSLVDRDLSEPYSIFTYRYFLHNWPNLCFVARVGERTVGSIV
CKAEKEMDDDPYTGYIAMLAVDTTYRKHGIGTALASRAIEAMRDLGCDEV
VLETEVTNGGALNLYTKLGFSKNERLNKYYLNGVDAYRLKLWFR*
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mRNA from alignment at H-paniculata_contig586:12032..17665-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig586.13462.1 ID=mRNA_H-paniculata_contig586.13462.1|Name=mRNA_H-paniculata_contig586.13462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5634bp|location=Sequence derived from alignment at H-paniculata_contig586:12032..17665- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTTCGTTTGGTGAGGTGATGATAAGACACAATACAGTATACGGCGGCTA
GACTCCTCGACCTTAATCATCACGTCCCAAAGCATCCATCAGGCGCTGCA
GTGATTCGTGGATAACGCTATGGTGGTGAGAAAACTGTCTCAAGTCGATG
TCTAGATCCTAGTGATGACTGTCTACTGCGTGTTCCACTGCAAGTGCAAA
AGTCAACAATCCTTGTTAAAGTTTGAGTTCGAACTCAGGATACGTGCGTG
GACTACACGTGGGCACAAGAAAAATAGATACCCATATTCAACCCCAAAGC
TATACTTTTATTCAACCCACCAGCTTTCACCAGTCTTAAATACTGTGAAT
GGTTCATATCAGTCTTGATGGTTTGTGAAGTATGCGTTAGTTCTTCAGTG
CTGACCACTGCATGATATGGGTGTAGAGGAGCGGTGTCGACGTGCGGACC
AAAGTGCACACGAAATTGGAAAAATATATATTCAATCATTCAACTTTGTG
GAGGTCCTGAAGGATGTTCCACGGTAGAGATGGTGTGTATGATTTGTGGA
GCTGTCTCGCTGTCACTCCATTGGTTCCGCGAGTCAGCCGTCTCGTTTTT
GCATGGTGATTTTGCTGCACCCATGTGTCTCTCGCTTTCTCTCTCTCTTT
CTCTCTCGCTTTTTCTCTCGCTTTCTGTGTCTGTCAACTAAATATCAAAA
TATCATATATCGATATCGTTTCCATCCATTGTGTATGTGAACCTGGGTCA
ATATCCGTAGAAACTTTAACAGTGTGGGTCTATTCGATTGCCCTATCTTT
CGTGCTTCGCGCATGACCTCTAAAACATCGCAGCTTGCTGTGCTCACGCA
CAGATGGACTATTCCCGCCAACCGTTGCGCGCGCGATCGGACTCTCGCCT
GGCTGCACCGGGGTAGAATGTACTAAATACGTGCTAGGACCTGAAAAACT
TTCCTAAAAGCGAATTAAGGTCGAATAAGAAGCGCCAACAAGAGGGCCGG
ATTTTGGCAGCTTGCCCGACAAGGGGTCTTCACGGCCGCTGTGAAGGGTG
ACCGGCCGATGCCGGGGAGTTTTAGGACTCCCACGTAAATATTAGGCTGA
CAACTCGTCTGATTCTTGGAATATTCACAATGATAACAACTACACAGGGA
GAGAAACGTTGACAATGTCAATAAGTCGTTGCTACAAAGATACTGAAGAT
GATACTATAGTACAGTGATTTAGGCCTTGCGCAAGACTGATACAAAACAG
TACACTGTTTCTGGTGTCCTCCTTCACAAGAACCTATGTGGCGATACTAA
ATATTAAGTATTGATCGACGAGAGTCTGTATGACAAGATACACTAGCCGT
AGGGGGCCAGAATTAACGAGTCAATTAGTGTTTCGCACCTCAAAATAATT
CCCTGCGGGCGTCATCCGGACGGGGCCGCCCGCGACCAGAAGCCTGTTTC
AACTCGCGATATGCTCAGTGCAACATTGCTACACTGACTCGCGAGTCTGC
TCGAGTCAAACATGAGCTTTTGTAATATTATCAGAACTTTACAGCAGAGT
GTGAAAGTGTAGAAAAGTCAAAGTGCATACCACCGCACATGAAGATATGC
GGAGCCGCTGGAAGCAGCCCGCCGTAGGCCGAATATGAAAGTATATGTAT
TTATTGACCATTTCTTTCAATGCCTTCCCCAATTTTCTGCTTTTCGACAG
GAAATGACTCGTGTTTGGCCTACTAAAACACTAAAACGGGAGTCACAGTC
TGCATATACTAACCTGTGCTTTTTACATTCGCACAAGACCCCCAAAAAGA
CGGCGATAAAAATATCCCCCTCAAAAGGTATTGTTTTTTCCGTTTTATTT
CATCTGTATTCAGTGTTACATATTGACGACAAATCTTCCAATTTTTCAAT
TGTTGATAAACCCTCGTACCTTTGGCAAAACACATCCAATCAATCAGGTA
GTTGCCGCCGAAACATTCAAGGGAGAGGATGCTGAGCCTCGTCCATCGAA
CGCCGGGGCGGACGGAGGAAGAAGTACACCGATGGAGGTGGGGGCCAGCA
GCGAGGCCAAAATGCCGTCGGTGGAGCTTGTCGAGTATGAAGACGAGCGG
CAGCTTGACGGCATCATGTCATTGGTAGACCGGGACCTGTCCGAGCCTTA
CTCCATCTTCACGTACCGTTACTTCCTGCATAACTGGCCCAACTTATGCT
TTGTGGTGAGCAGTGACTCGTGCTGTACAGATAGTGTTCCATCTTGGTCT
TCTTTTTGGGAAAAACAGATAGGTTGAGGTTGTCCTAGAAGCCAAGTCCG
TGACTTTCCGTGATGACACCTGGAAGCTCAATATCTTGGACAAACAGAAT
TATAGTCGATCCTGACACTTCACGCGCATGTTACCTATTCTGGCTTCACC
TCTTGTGTTGTAAGGCGTGGACTTGCAGTTTGTTGGGTATTATGGTTCCG
TGTTGATTCAATATTGCTGTGATATGACCATATGCTGGTGGGCTATTGAG
AAGAGTGTTATCAAGTACGCGGCATGGTGTGGTCAGTTTTTCAAGTGTAT
TCACGAATGTGCCCAGGTTACTACATTCAAATATCCCTTATTCTGTGCTA
ACCGTGCAAAAACAAAGTGTCTTTTTAGCATATAATCGTCATTATTTTAA
CCATTGGGAGGTCTATCTTTCAAGACTTGACTGACTGTTGATACTTGACT
CAAACGATCGAAAATGCTGCTTGCGCCTCTTGACCACTCGCGACCAGGCG
CGGGTAGGGGAGCGCACGGTCGGGTCTATCGTATGCAAGGCGGAAAAGGA
GATGGATGATGACCCCTACACGGGATATATCGCTATGCTCGCGGTCGATA
CAACCTACAGAAAGCACGGCATCGGTGAGCGGGTTTAGATTTCGCTCATG
CCCATACATAGGCTGTCCGTGCATAATGATTGATGTTTTAGAAAATAACG
TGGGACATGAAAAAACGTTTTGCGAACGAATGTATCTTGAGTTTATATCT
TGAGTGTATAATGTGTTACGTAGCTGTCGATTCCCCCGCCATCAAATAAA
CTAGCTCTTGCGGCATTCTTGTGTCGGATACCCCTTCATTGATTCCCTGC
CCCTTCTTTACCCTTCCCTGTATTTTGTGTGTTTGTGCGTGTGGATGTGT
GTATGTTAATTTACTGTGTGTCCTTTTCTTGGATGATGGTAGGTACGGCC
TTAGCTTCCAGAGCAATCGAGGCCATGCGCGATCTGGGATGCGACGAGGT
ACGAGTTGACCTATACAGTATTGTCGAGCTCGCACAGAGGGGACATGATG
ATATTATGCCCCTTGGCTCTACCCGAGACTCTTGTGATCGATGCTGCAGT
GGGGGGGCACCGCGTTCATTTGCGTAATTTACATCAACAACAGCGCTGTT
TTCAACAATGAATATTAAAATCTCAAATTATGGACGCAGGTCTCGATCAA
ATGACGTGGTATTTGTCTAGCTGTGCGTGTTTTGGGAATCGCTCGACTAA
AACAGCAACCTGTATTGTCACATATATGCCGCGGAGTTTTGGCGATTAGA
GCCATGAGAAGCTCCATGGCACGTTATTGGGTTTTCTTTTGGTTTGAGCT
TAACCGAAGGGTTGACCGACAAGGCTATACTCCATGCGTTTTGCATGGGT
CTGGAATCGGAACACGGTAAAAAGTGTTGTAGGCTTAAACTTCTTCCCTC
TCAGTGCTCCTGATACATAAAAAATATATATGTTCGGGGTAGAAAGAAAT
GGCACGTTGTTTTTGCGAATTTGCGAATATTCATGAAAGGAGGGTTTATT
CTTTGCAGATACTTGTTGTCGGAATTATTCCTCTCTACAGGGCATCCTCC
ATATAATTGTGTAATAATATAGATGTCGGCTACACGATCGACACGTTGAG
CGTCTGTGTTGAGCAGTGGTGCACTCGGCAGGACAATATGTATAGCCCTC
GAAGTAGTTCAAAACACTTGCAAGTCGGTGGTGGACCCTGGCACACTCTT
TAATGTAGTTTACAAACCTTTATAATATAATCATCACTCAGTGTTTGAAC
GTATAATGAGATTCGCTTTTATTTAACCCGTCTTTGGCCAAGAGATGGCG
ATCTCCATGTATATGGTTCATTATTTTGTGTATATGGAGAGGTGAAAAAA
AAACCCTGCTTATCAGTCCTTATCATATGTCGGGGGGGCGGAGGGAGTTA
CATAGAGTAAAGAGCAATCTAAAGTAGAAGCAGATAGGTATCTAAAGTAG
AAGCAGATAGGTATAAATTACTATGGGAAATCATGGCAAAAACCGTCAAA
ATCAATGGAGGTATGCTGAGCATCCTAAACCTGCTGAGTTACTTGGTTAT
TATCCACAAACTGGCCAAACTAGGGGGGGGGCGGGGTGGGTGGGGGGGAG
GGGGCACAACGCGCTTGGCTGAACTTCTTTTTTAGCATTCACCACCTTAC
AACATCGTAACACATTTCACGCCGAGGTTATGCAGCCTACACTCTTTAAA
ACAACGTAGGGGGTTTACTGTGTCTCAACCGTTGCACCGTTGTGGATATG
GTATTTTGGGGGGATTAGAAGGCAACGAGCGTTCAAATTATTCCGCGACT
GTAGAAAAACATGGAAATAGCGGCGCTTTGAAGAAGATCACACACGCACG
TCACAGAGATTCTACCTTGTAATCTATCACCCGCTTTCCCACGCAAGGCC
CCCAAATACTTATAATCCACTCCATAACCCCCCTCCCTTTTCCCCTCTGT
ACACGCGCGTCCTTGTGCTGCATAAGGTGGTCCTGGAGACAGAAGTGACA
AATGGAGGTGCTTTGAATCTTTATACGAAGCTAGGATTCAGCAAGAACGA
GCGGCTAAACAAGTACTACCTCAACGGAGTAGACGCATACCGACTCAAGC
TGTGGTTCCGATAGCAGGGTTTTCGTGTTTCGTCATATGTTCTGCAAGAA
TTGGGTACTCAGCAACACACACAGTCATGCCCAGATGCCAACTACTACTT
GTTTTCAATTTTTGTACACTACTAAACTTGCAAAAACTAAGGCGAATCAG
GATCACACGAACACCAGTGCAGCGTTTTTTTTTATTTAGTTGTAATTTTT
AAGTATTGGAACGCATCCTTGAGTAAGCAACTATGCACACATCGGACCGA
TCAATACCGGTACAAGTCGGCTGGTAGGGATCAGCCGTGGACAAGCTGTG
CCAAGTATCGGTAAGGTACTCACTAGAGGTGAAACTCACATGCTAACGAT
CGGTAGGGTAACGATCGGAGACGGAATTTATATACGGATCAAAAAGGTGT
ACCGATCGTACTATATATCGGTGCAAAATGATCGGTACGAGCTGTGAACG
ATCTGATCGATCCTAACCGTGCACCTACTGGACTATTATCCGGGGAAGGG
GGGAGGGGAGAGCATGCTGTACAATGTTTTTGACTTCATGAAAGAACGAT
CACATCAAGCACACGTTAAATCGAAAGCAACGTTGGGTGGCTGTTGGGTC
TGGACATTTCAAATCTTGTATTCGGTGGGCTGTCAGGACAGGAAGAGCTT
GGTTTTCATGAGTGTTTGTTCGGACTCTGGGGAAGACGAATATACTCATG
AATATTCATACTCCCTCGGTCTCATAAGTCTAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig586:12032..17665-

>mRNA_H-paniculata_contig586.13462.1 ID=mRNA_H-paniculata_contig586.13462.1|Name=mRNA_H-paniculata_contig586.13462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig586:12032..17665- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGATGGTGGTAGTTGCCGCCGAAACATTCAAGGGAGAGGATGCTGA
GCCTCGTCCATCGAACGCCGGGGCGGACGGAGGAAGAAGTACACCGATGG
AGGTGGGGGCCAGCAGCGAGGCCAAAATGCCGTCGGTGGAGCTTGTCGAG
TATGAAGACGAGCGGCAGCTTGACGGCATCATGTCATTGGTAGACCGGGA
CCTGTCCGAGCCTTACTCCATCTTCACGTACCGTTACTTCCTGCATAACT
GGCCCAACTTATGCTTTGTGGTAGTTGCCGCCGAAACATTCAAGGGAGAG
GATGCTGAGCCTCGTCCATCGAACGCCGGGGCGGACGGAGGAAGAAGTAC
ACCGATGGAGGTGGGGGCCAGCAGCGAGGCCAAAATGCCGTCGGTGGAGC
TTGTCGAGTATGAAGACGAGCGGCAGCTTGACGGCATCATGTCATTGGTA
GACCGGGACCTGTCCGAGCCTTACTCCATCTTCACGTACCGTTACTTCCT
GCATAACTGGCCCAACTTATGCTTTGTGGCGCGGGTAGGGGAGCGCACGG
TCGGGTCTATCGTATGCAAGGCGGAAAAGGAGATGGATGATGACCCCTAC
ACGGGATATATCGCTATGCTCGCGGTCGATACAACCTACAGAAAGCACGG
CATCGGCGCGGGTAGGGGAGCGCACGGTCGGGTCTATCGTATGCAAGGCG
GAAAAGGAGATGGATGATGACCCCTACACGGGATATATCGCTATGCTCGC
GGTCGATACAACCTACAGAAAGCACGGCATCGGTACGGCCTTAGCTTCCA
GAGCAATCGAGGCCATGCGCGATCTGGGATGCGACGAGGTACGGCCTTAG
CTTCCAGAGCAATCGAGGCCATGCGCGATCTGGGATGCGACGAGGTGGTC
CTGGAGACAGAAGTGACAAATGGAGGTGCTTTGAATCTTTATACGAAGCT
AGGATTCAGCAAGAACGAGCGGCTAAACAAGTACTACCTCAACGGAGTAG
ACGCATACCGACTCAAGCTGTGGTTCCGATAGGTGGTCCTGGAGACAGAA
GTGACAAATGGAGGTGCTTTGAATCTTTATACGAAGCTAGGATTCAGCAA
GAACGAGCGGCTAAACAAGTACTACCTCAACGGAGTAGACGCATACCGAC
TCAAGCTGTGGTTCCGATAG
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