prot_H-paniculata_contig58549.13458.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig58549.13458.1
Unique Name	prot_H-paniculata_contig58549.13458.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	324

Homology

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_HETA2 (Photosystem II D2 protein n=340 Tax=cellular organisms TaxID=131567 RepID=PSBD_HETA2)

HSP 1 Score: 652 bits (1683), Expect = 2.350e-236
Identity = 312/323 (96.59%), Postives = 319/323 (98.76%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSGLLLFP AYL++GGWFTGTTFVTSWYTHGLA+SYLEGCNFLTAAVSTP+NSMGHSL+LLWGPEAQGDFTRW QIGGLW F+ALHG+F LIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL
Sbjct:   29 VGWSGLLLFPTAYLAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSMGHSLILLWGPEAQGDFTRWCQIGGLWTFVALHGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 351

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: A0A023HR93_NEOPR (Photosystem II D2 protein n=12 Tax=cellular organisms TaxID=131567 RepID=A0A023HR93_NEOPR)

HSP 1 Score: 642 bits (1657), Expect = 2.160e-232
Identity = 304/323 (94.12%), Postives = 316/323 (97.83%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSGLLL PCAYL++GGW TGTTFVTSWYTHGLA+SYLEGCNFLTAAVSTP+NSMGHSLL LWGPEAQGDFTRW QIGGLWAFIALHGSF LIGFCLRQFEIARLVG+RPYNAIAFSGPI++FVSVFL+YPLGQASWFFAPS GVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATV+NTLFEDGDAA+TFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSA GIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIR+WMAAQDQPHENF+FPEEVLPRGNAL
Sbjct:   29 VGWSGLLLLPCAYLAVGGWLTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWAFIALHGSFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLMYPLGQASWFFAPSLGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVQNTLFEDGDAADTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAFGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRSWMAAQDQPHENFIFPEEVLPRGNAL 351

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_GALSU (Photosystem II D2 protein n=20 Tax=cellular organisms TaxID=131567 RepID=PSBD_GALSU)

HSP 1 Score: 641 bits (1654), Expect = 6.180e-232
Identity = 301/323 (93.19%), Postives = 316/323 (97.83%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            +GWSGLLLFPC+YL+LG WFTGTTFVTSWYTHGLA+SYLEGCNFLTAAVS+P+NSMGHSLL LWGPEAQGDFTRW QIGGLW F ALHG+F LIGFCLRQFEIARLVGIRPYNAIAFSGPI++FVSVFL+YPLGQASWFFAPSFGVAAIFRF+LFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDG+AANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTS+IGI+GLALNLRAYDFVSQELRAAEDPEFETFYTKN+LLNEGIRAWMA QDQPHENFVFPEEVLPRGNAL
Sbjct:   29 IGWSGLLLFPCSYLALGAWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTALHGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLIYPLGQASWFFAPSFGVAAIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGEAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSSIGIIGLALNLRAYDFVSQELRAAEDPEFETFYTKNLLLNEGIRAWMATQDQPHENFVFPEEVLPRGNAL 351

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_NEOYE (Photosystem II D2 protein n=59 Tax=Eukaryota TaxID=2759 RepID=PSBD_NEOYE)

HSP 1 Score: 637 bits (1644), Expect = 2.070e-230
Identity = 302/323 (93.50%), Postives = 315/323 (97.52%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSGLLLFPCAYL++GGW TGTTFVTSWYTHGLA+SYLEGCNFLTAAVSTP+NSMGHSLL LWGPEAQGDFTRW QIGGLWAFIALHGSF LIGFCLRQFEIARLVG+RPYNAIAFSGPI++FVSVFL+YPLGQASWFFAPS GVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATV+NTLFEDGDAA+TFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSA GIVGLALNLRAYDFVSQELRAAEDPEFETFYTK IL +EGIR+WMAAQDQPHENF+FPEEVLPRGNAL
Sbjct:   29 VGWSGLLLFPCAYLAVGGWLTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWAFIALHGSFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLMYPLGQASWFFAPSLGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVQNTLFEDGDAADTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAFGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKIILXDEGIRSWMAAQDQPHENFIFPEEVLPRGNAL 351

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_CYAM1 (Photosystem II D2 protein n=6 Tax=Cyanidiaceae TaxID=265316 RepID=PSBD_CYAM1)

HSP 1 Score: 633 bits (1633), Expect = 9.810e-229
Identity = 297/323 (91.95%), Postives = 314/323 (97.21%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            +GWSGLLLFPC+YL+LG WFTGTTFVTSWYTHGLA+SYLEGCNFLTAAVS+P+NSMGHSLL LWGPEAQGDFTRW QIGGLW F ALHG+F LIGFCLRQFEIARLVG+RPYNAIAFSGPI++FVSVFLLYPLGQASWFFAPSFGVA IFRF+LFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATV+NTLFEDG+A++TFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFF+LFVPV GLW S+IGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL
Sbjct:   29 IGWSGLLLFPCSYLALGAWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTALHGAFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVAGIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVQNTLFEDGEASDTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFLLFVPVAGLWASSIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 351

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_GUITH (Photosystem II D2 protein n=56 Tax=cellular organisms TaxID=131567 RepID=PSBD_GUITH)

HSP 1 Score: 633 bits (1632), Expect = 1.390e-228
Identity = 298/323 (92.26%), Postives = 315/323 (97.52%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            +GWSGLLLFP +YLS+GGWFTGTTFVTSWYTHGLA+SYLEGCNF TAAVSTP+NSMGHSLLLLWGPEAQGDFTRW QIGGLWAF ALHG+F LIGFCLRQFEIARLVGIRPYNAIAFSGPI+IFVSVFL+YPLGQASWFFAPS GVAAIFRFLLF+QGFHN+TLNPFHMMGVAGILG ALLCAIHGATV+NT+FEDGDAANTFRAFTPTQSEETYSMVTANRFWSQ+FGVAFSNKRWLHFFMLFVP+ GLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKN+LLNEGIR+WMAAQDQPHENF+FPEEVLPRGNAL
Sbjct:   29 IGWSGLLLFPTSYLSIGGWFTGTTFVTSWYTHGLASSYLEGCNFFTAAVSTPANSMGHSLLLLWGPEAQGDFTRWCQIGGLWAFCALHGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAIFVSVFLMYPLGQASWFFAPSLGVAAIFRFLLFIQGFHNFTLNPFHMMGVAGILGAALLCAIHGATVQNTIFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQVFGVAFSNKRWLHFFMLFVPLAGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNLLLNEGIRSWMAAQDQPHENFIFPEEVLPRGNAL 351

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_PHYPA (Photosystem II D2 protein n=48 Tax=Embryophyta TaxID=3193 RepID=PSBD_PHYPA)

HSP 1 Score: 625 bits (1612), Expect = 1.680e-225
Identity = 293/323 (90.71%), Postives = 309/323 (95.67%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSGLLLFPCAY SLGGWFTGTTFVTSWYTHGLA+SYLEGCNFLTAAVSTP+NS+ HSLLLLWGPEAQGDFTRW Q+GGLW F+ALHG+FALIGF LRQFE+AR V +RPYNAIAFSGPI++FVSVFL+YPLGQ+ WFFAPSFGVAAIFRF+LF QGFHNWTLNPFHMMGVAG+LG ALLCAIHGATVENTLFEDGD ANTFRAF PTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLW SAIG+VGLALNLRAYDFVSQE+RAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHEN VFPEEVLPRGNAL
Sbjct:   31 VGWSGLLLFPCAYFSLGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLVFPEEVLPRGNAL 353

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_THEVB (Photosystem II D2 protein n=184 Tax=Cyanobacteria TaxID=1117 RepID=PSBD_THEVB)

HSP 1 Score: 624 bits (1609), Expect = 4.630e-225
Identity = 289/323 (89.47%), Postives = 311/323 (96.28%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSG+LLFPCAYL+LGGW TGTTFVTSWYTHGLA+SYLEGCNFLT AVSTP+NSMGHSLLLLWGPEAQGDFTRW Q+GGLW FIALHG+F LIGF LRQFEIARLVG+RPYNAIAFS PI++FVSVFL+YPLGQ+SWFFAPSFGVAAIFRFLLF QGFHNWTLNPFHMMGVAG+LGGALLCAIHGATVENTLF+DG+ A+TFRAF PTQ+EETYSMVTANRFWSQIFG+AFSNKRWLHFFMLFVPVTGLW SAIG+VGLALNLR+YDF+SQE+RAAEDPEFETFYTKN+LLNEGIRAWMA QDQPHENFVFPEEVLPRGNAL
Sbjct:   30 VGWSGILLFPCAYLALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGAFGLIGFMLRQFEIARLVGVRPYNAIAFSAPIAVFVSVFLIYPLGQSSWFFAPSFGVAAIFRFLLFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLFQDGEGASTFRAFNPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRSYDFISQEIRAAEDPEFETFYTKNLLLNEGIRAWMAPQDQPHENFVFPEEVLPRGNAL 352

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: PSBD_CHAVU (Photosystem II D2 protein n=10 Tax=Streptophyta TaxID=35493 RepID=PSBD_CHAVU)

HSP 1 Score: 624 bits (1609), Expect = 4.800e-225
Identity = 293/323 (90.71%), Postives = 308/323 (95.36%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSGLLLFPCAY SLGGW TGTTFVTSWYTHGLA+SYLEGCNFLTAAVSTP+NSM HSLLLLWGPEAQGDFTRW Q+GGLW FIALHG+FALIGF LRQFE+AR V +RPYNAIAFSGPIS+FVSVFL+YPLGQ+ WFFAPSFGVAAIFRF+LF QGFHNWTLNPFHMMGVAG+LG ALLCAIHGATVENTLFEDGD ANTFRAF PTQSEETYSMVTANRFWSQIFG+AFSNKRWLHFFMLFVPVTGLW SAIG+VGLALNLRAYDFVSQE+RA+EDPEFETFYTKNILLNEGIRAWMAAQDQPHEN VFPEEVLPRGNAL
Sbjct:   31 VGWSGLLLFPCAYFSLGGWLTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSMAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHGAFALIGFMLRQFELARSVQLRPYNAIAFSGPISVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQSEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRASEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLVFPEEVLPRGNAL 353

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BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Match: A0A7G7XPQ0_PHLCA (Photosystem II D2 protein n=2 Tax=Embryophyta TaxID=3193 RepID=A0A7G7XPQ0_PHLCA)

HSP 1 Score: 623 bits (1606), Expect = 7.050e-225
Identity = 292/323 (90.40%), Postives = 308/323 (95.36%), Query Frame = 0

Query:    1 VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVSTPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQFEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAANTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL 323
            VGWSGLLLFPCAY SLGGWFTGTTFVTSWYTHGLA+SYLEGCNFLTAAVSTP+NS+ HSLLLLWGPEAQGDFTRW Q+GGLW F+ALHG+FA IGF LRQFE+AR V +RPYNAIAFSGPI++FVSVFL+YPLGQ+ WFFAPSFGVAAIFRF+LF QGFHNWTLNPFHMMGVAG+LG ALLCAIHGATVENTLFEDGD ANTFRAF PTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLW SAIG+VGLALNLRAYDFVSQE+RAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHEN VFPEEVLPRGNAL
Sbjct:   13 VGWSGLLLFPCAYFSLGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLSHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFASIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLVFPEEVLPRGNAL 335

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig58549.13458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
PSBD_HETA2	2.350e-236	96.59	Photosystem II D2 protein n=340 Tax=cellular organ...	[more]
A0A023HR93_NEOPR	2.160e-232	94.12	Photosystem II D2 protein n=12 Tax=cellular organi...	[more]
PSBD_GALSU	6.180e-232	93.19	Photosystem II D2 protein n=20 Tax=cellular organi...	[more]
PSBD_NEOYE	2.070e-230	93.50	Photosystem II D2 protein n=59 Tax=Eukaryota TaxID...	[more]
PSBD_CYAM1	9.810e-229	91.95	Photosystem II D2 protein n=6 Tax=Cyanidiaceae Tax...	[more]
PSBD_GUITH	1.390e-228	92.26	Photosystem II D2 protein n=56 Tax=cellular organi...	[more]
PSBD_PHYPA	1.680e-225	90.71	Photosystem II D2 protein n=48 Tax=Embryophyta Tax...	[more]
PSBD_THEVB	4.630e-225	89.47	Photosystem II D2 protein n=184 Tax=Cyanobacteria ...	[more]
PSBD_CHAVU	4.800e-225	90.71	Photosystem II D2 protein n=10 Tax=Streptophyta Ta...	[more]
A0A7G7XPQ0_PHLCA	7.050e-225	90.40	Photosystem II D2 protein n=2 Tax=Embryophyta TaxI...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PRINTS	PR00256	REACTNCENTRE	coord: 112..134 score: 24.43 coord: 167..193 score: 33.33 coord: 79..107 score: 31.53
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 1..288 e-value: 1.1E-73 score: 247.6
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..323
IPR000484	Photosynthetic reaction centre, L/M	PROSITE	PS00244	REACTION_CENTER	coord: 161..187
IPR036854	Photosystem II protein D1/D2 superfamily	GENE3D	1.20.85.10		coord: 112..268 e-value: 6.0E-21 score: 76.8
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 1..322
IPR005868	Photosystem II D2 protein	TIGRFAM	TIGR01152	TIGR01152	coord: 1..323 e-value: 1.9E-218 score: 722.6
IPR005868	Photosystem II D2 protein	HAMAP	MF_01383	PSII_PsbD_D2	coord: 1..323 score: 55.93
None	No IPR available	PANTHER	PTHR33149:SF17	PHOTOSYSTEM II D2 PROTEIN	coord: 1..323
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 156..166
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..131
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 132..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 31..41
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..64
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 263..323
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 65..75
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 167..187
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 188..236
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..155
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 237..262
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 99..109
None	No IPR available	TMHMM	TMhelix		coord: 167..189
None	No IPR available	TMHMM	TMhelix		coord: 7..29
None	No IPR available	TMHMM	TMhelix		coord: 138..155
None	No IPR available	TMHMM	TMhelix		coord: 111..133
None	No IPR available	TMHMM	TMhelix		coord: 240..262
None	No IPR available	TMHMM	TMhelix		coord: 76..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig58549	contig	H-paniculata_contig58549:32..1003 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig58549.13458.1	mRNA_H-paniculata_contig58549.13458.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig58549 32..1003 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig58549.13458.1 ID=prot_H-paniculata_contig58549.13458.1|Name=mRNA_H-paniculata_contig58549.13458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
VGWSGLLLFPCAYLSLGGWFTGTTFVTSWYTHGLATSYLEGCNFLTAAVS
TPSNSMGHSLLLLWGPEAQGDFTRWIQIGGLWAFIALHGSFALIGFCLRQ
FEIARLVGIRPYNAIAFSGPISIFVSVFLLYPLGQASWFFAPSFGVAAIF
RFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGDAA
NTFRAFTPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGL
WTSAIGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGIRAWM
AAQDQPHENFVFPEEVLPRGNAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000484	Photo_RC_L/M
IPR036854	Photo_II_D1/D2_sf
IPR005868	PSII_PsbD/D2