mRNA_H-paniculata_contig5846.13451.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5846.13451.1
Unique NamemRNA_H-paniculata_contig5846.13451.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.910e-8
Identity = 58/174 (33.33%), Postives = 79/174 (45.40%), Query Frame = 1 
Query:  202 CLDAFNVALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLI----VSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSVDCVTALPPSLQHLEFG-----------KHFNESIMGVEWP 678
            CL+A  VAL E   GK    STK  QLASL+FC+ACR+  TL +K+   TPRRL   +      P+   GT            RVP LRAR +      +  + + +Y  M  ++  FV        R F  S++ V A P  L+ +E               F++ I GV WP
Sbjct:   12 CLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGT------------RVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFV--------RAFEDSLEAV-AWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWP 164
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5KRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 6.980e-8
Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 1 
Query:  193 ASLCLDAFNVALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWV----PSSREFAAPRTASGTP 417
            +S CLDAF VAL E     + + ST  LQLASLQFCVACRS S + +++  +TPR LW     P +R  A  R AS  P
Sbjct:    4 SSRCLDAFIVALNETCHEGKCITSTTALQLASLQFCVACRSASPVRLRIDTDTPRYLWAKDSGPQARRSAMIRRASRVP 82
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.610e-7
Identity = 53/163 (32.52%), Postives = 74/163 (45.40%), Query Frame = 1 
Query:  196 SLCLDAFNVALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSVDCVTALPPSLQHLEFGKH--FNESIMGVEWP 678
            S CL    VAL E   GK    STK LQLASL+ C+ACR   TL + +   TPRRL   +      P+   GT            RVP LRAR    +      +   +F      +++ +L + + F  S+D +   P  L+ +EF +    N  + GV WP
Sbjct:  134 SSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGT------------RVPRLRARRATWNVPTASGMRTSIFAT----MDVDYLEFGQAFHGSLDAIV-WPRRLKTIEFRQSSPLNRLLDGVSWP 279
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 3.290e-7
Identity = 51/161 (31.68%), Postives = 78/161 (48.45%), Query Frame = 1 
Query:  202 CLDAFNVALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSVDCVTALPPSLQHLEF--GKHFNESIMGVEWP 678
            CL+A  VAL E   GK    STK LQLASL FC+ACR+  T+ + + ++ PRRL   +      P+    T            RVP LR+R +  +     +L   +F       ++ +L +   F  S++ V   P  L+ +EF     F+++I  V+WP
Sbjct:   51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWT------------RVPRLRSRRVTWNMPTAAKLRTPIFA----MTDMEYLEFGDAFGDSLEAVP-WPEHLRTMEFHHDSPFDQTIELVQWP 194
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 7.170e-7
Identity = 59/164 (35.98%), Postives = 80/164 (48.78%), Query Frame = 1 
Query:  193 ASLCLDAFNVALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSVDCVTALPPSLQHLEFGKH--FNESIMGVEWP 678
            ++ CL+A  VAL E   GK    STK LQLASL+FC+ACR+  TL + +    PR L        AA   A G P+  + L     RVP LRAR +  +      L   +F      ++L HL +   F  S++ VT  P  L+ + F     FN  I  V+WP
Sbjct:   33 SNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRML-------LAA---ADGPPQHPKRLS--RRRVPRLRARHVTWNMPTAAELRSPIFA----LMDLDHLDFGSAFEGSLEAVT-WPRRLESIAFHNFSPFNTPIDLVKWP 179
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.170e-6
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 1 
Query:  220 VALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPS-SREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENT--LFVNLRHLVYDRRFSTSVDCV--TALPPSLQHLEFGKHFNESIMGVEW 675
            VAL E + GK+  +ST  LQLAS++FCVACRS STL + + + TPR LW  + S +             GR +++   RVP  R R      EVT  L   M  E +   F NL  + +      S D     ALP  L+ + FG+   + +  V W
Sbjct:    2 VALNETYGGKQWYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLV---RVPPFRPR------EVTWNLPPSMLSEASKDAFKNLECMSFSDAVERSGDSFDGVALPRGLKSVVFGRWCYQHVDKVLW 149
[Close]
BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.180e-6
Identity = 60/183 (32.79%), Postives = 81/183 (44.26%), Query Frame = 1 
Query:  172 SERERKRASLCLDAFNVALAEAFVG--KRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLI-----------VSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSV-DCVTAL--------PPSLQHLEFGKHFNE 654
            SE +R+    CLDAF VAL++ + G  KR   ST  LQLASL+FC ACRS   L V +  ETP  LW             +GT          +TRVP ++A GL             S E+  RL     + +    NL  +V+ +     V DC   +        P SL+ L F   F++
Sbjct:    3 SEAQRR----CLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW-----SLGQANPTAGT----------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
[Close]
BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 3.840e-6
Identity = 53/147 (36.05%), Postives = 72/147 (48.98%), Query Frame = 1 
Query:  244 GKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSVDCVTALPPSLQHLEF--GKHFNESIMGVEWP 678
            GKR   STK LQ ASL+FC+ACR   TL +++  +TPR L         AP   S  P          TRVP LRAR +I +      L   +F       ++  L +   F  S++ V A P  L+ ++F  G  FN+ I GVE+P
Sbjct:    4 GKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLA----AVDAPSPHSKRPCR--------TRVPRLRARRVIWNMPTATELKSPIFA----LKDVVRLDFGPAFEGSLESV-AWPQRLKEIDFSWGSLFNQPIEGVEFP 133
[Close]
BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.580e-5
Identity = 52/145 (35.86%), Postives = 68/145 (46.90%), Query Frame = 1 
Query:  220 VALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENTLFVNLRHLVYDRRFSTSVDCVTALPPSLQHLEFGKHFNE 654
            +AL E   GKR   STK LQLASL+FC+ACR    L +K+  +TPR L         AP      P T R      TRVP LRAR +  +      L   MF       ++  L +   F+ S++ V   PP  Q + F   FN+
Sbjct:   23 LALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLA----AVDAP-----PPHTKRPC---RTRVPRLRARRVKWNMPTATELRTLMFA----LKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQ 151
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BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.620e-5
Identity = 39/93 (41.94%), Postives = 50/93 (53.76%), Query Frame = 1 
Query:  196 SLCLDAFNVALAEAFVGKRSLMSTKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGTPRTGRGLIIPTTRVPLLRAR 474
            S CL+A  +AL E   G+    STK LQLASL+FCVACR+  TL +K+  + PRRL   +      P             ++  TRVP LRAR
Sbjct:  111 SSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPE------------LLCRTRVPRLRAR 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5846.13451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JUA5_9PHAE2.910e-833.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRT6_9PHAE6.980e-849.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPY7_9PHAE1.610e-732.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF9_9PHAE3.290e-731.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZZ4_9PHAE7.170e-735.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG83_9PHAE1.170e-635.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1V9_9PHAE3.180e-632.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE3.840e-636.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE1.580e-535.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI2.620e-541.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5846contigH-paniculata_contig5846:1160..7001 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size5493
Cds size2208
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5846.13451.1prot_H-paniculata_contig5846.13451.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5846 1274..3830 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930636.1683547-UTR-H-paniculata_contig5846:1159..12731622930636.1683547-UTR-H-paniculata_contig5846:1159..1273Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5846 1160..1273 +
1691481383.1793683-UTR-H-paniculata_contig5846:1159..12731691481383.1793683-UTR-H-paniculata_contig5846:1159..1273Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5846 1160..1273 +
1622930636.2197912-UTR-H-paniculata_contig5846:3830..70011622930636.2197912-UTR-H-paniculata_contig5846:3830..7001Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5846 3831..7001 +
1691481383.2148814-UTR-H-paniculata_contig5846:3830..70011691481383.2148814-UTR-H-paniculata_contig5846:3830..7001Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5846 3831..7001 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930636.1860898-CDS-H-paniculata_contig5846:1273..13251622930636.1860898-CDS-H-paniculata_contig5846:1273..1325Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5846 1274..1325 +
1691481383.1933274-CDS-H-paniculata_contig5846:1273..13251691481383.1933274-CDS-H-paniculata_contig5846:1273..1325Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5846 1274..1325 +
1622930636.200349-CDS-H-paniculata_contig5846:1674..38301622930636.200349-CDS-H-paniculata_contig5846:1674..3830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5846 1675..3830 +
1691481383.2028167-CDS-H-paniculata_contig5846:1674..38301691481383.2028167-CDS-H-paniculata_contig5846:1674..3830Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5846 1675..3830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5846.13451.1

>prot_H-paniculata_contig5846.13451.1 ID=prot_H-paniculata_contig5846.13451.1|Name=mRNA_H-paniculata_contig5846.13451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=736bp
MAGVLTSNDSGSGVVRAGNSERERKRASLCLDAFNVALAEAFVGKRSLMS
TKHLQLASLQFCVACRSGSTLLVKLTKETPRRLWVPSSREFAAPRTASGT
PRTGRGLIIPTTRVPLLRARGLIVSPEVTDRLYDFMFRENTLFVNLRHLV
YDRRFSTSVDCVTALPPSLQHLEFGKHFNESIMGVEWPASLQQLTFGYSF
NQSIEGVKWSASLQQITFGYYFNKPIEGVEWPVSLQQVTFGYSFNQPIEE
VQWPASLQQLMLGYLFNQPIEGVQWPASLQQLTFGYAFNQPIEGMQWPAS
LQQLTFGYAFNQPIEEVDWLASLEKITFGYAFNQPIEGVEWPTLLQQLAF
GSLFNQNIEEVEWPASLQKIAFGFVFNQPIGEVKWPASLQQITFGYGFNQ
PIEEVAWPASLQHLTFGNDFNQSITRMEWPPLLLQLEFGRNFNQRIEGMG
WPYLLQQLAFGYDFNKPIEHVVFPASLEKLSFGGAFNQPIDRVEWPASLQ
QLTFGYSFDRSIQGVKWPVSLQQLTFGCFFNQPIERVALPVSLQQLTFGY
FFNRSIENVNWPLSLQKVTFGVSFEKPIGATEWPASLQQLEFGHNFNQPI
ELAVWPVSLQRLEFGHSFNQCIEGVKWPPSLQQLEFGFLFNQPVEAVQWP
ALLQQLKFGHYFNQPIERAIWPASLQQIEFGHYFNQPVEAVNWPSSLEQL
MFGEGFNQPVERVEWPASLKKLTFGVASTKMLTSW*
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mRNA from alignment at H-paniculata_contig5846:1160..7001+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5846.13451.1 ID=mRNA_H-paniculata_contig5846.13451.1|Name=mRNA_H-paniculata_contig5846.13451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5842bp|location=Sequence derived from alignment at H-paniculata_contig5846:1160..7001+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGAAGGGCTGTGGGCGACGCGTAGGCTATTCAGTAGTGGAGCTCGCC
TACTCCACAAGGGTCGCCGCAAAACACAATTCTTGGGATTCCTGTATCAC
AGCCTTGCGGCACGATGGCTGGCGTACTGACCTCAAACGACTCGGGAAGC
GGAGTAGTTCGTGCCGGTGAGAGCAACATCCGCGATCCGCTTCTTTCCTA
CCAAACTTGGTTTGGCAATGCTTTTTGTTAGTGCCTTTATTTCAGCCAAC
CTTTTGTGATTCTCGGATTTCCTGCGGCAATGGTACGCGCGAAACCAACA
CAAAGGCATGTGTACGTTTATAAATGGCATGGCGGGTATGGCGTGTAATC
TGTAGAGGACGGGGAAGTTTTGTTGCAAGTGTATGTGTGTGTGCATCTGC
TGTTCGTCGGTTCCGCTTGCACATACGTTACGTTCCCTAGTGACTCTTTT
GTTACCGACCGAAGTTTGTCTTGCGCGCTACACATACTATGCCGACTACA
CGTACACTTGTCCAGGAAACTCAGAAAGAGAGAGAAAACGAGCCAGTCTG
TGTTTGGACGCATTCAACGTTGCGCTTGCTGAGGCTTTCGTCGGGAAGAG
ATCGTTAATGTCAACCAAGCACTTGCAGCTCGCATCGCTGCAATTCTGTG
TAGCTTGCCGGAGCGGTAGCACCTTGCTCGTGAAACTCACGAAAGAGACA
CCACGGAGACTGTGGGTTCCATCTTCACGGGAATTTGCAGCTCCGAGGAC
TGCCAGCGGTACGCCGCGTACGGGTCGAGGTTTAATCATCCCAACGACGC
GTGTGCCGCTGTTGCGAGCACGCGGCTTGATCGTATCGCCGGAGGTAACT
GATCGTCTGTACGACTTCATGTTTCGCGAGAACACTCTGTTCGTCAATCT
TAGGCACTTGGTATATGATCGAAGGTTCAGCACGTCCGTTGATTGTGTCA
CCGCGCTGCCTCCTTCGCTGCAGCACCTCGAGTTCGGCAAACATTTCAAC
GAGTCCATTATGGGGGTGGAGTGGCCTGCCTCGCTGCAGCAACTCACATT
TGGGTATTCGTTCAACCAGTCAATTGAAGGGGTGAAGTGGTCTGCTTCGC
TGCAGCAGATCACGTTCGGGTACTACTTCAATAAGCCAATTGAAGGGGTT
GAGTGGCCTGTCTCGTTACAGCAAGTTACATTCGGGTATTCGTTCAACCA
GCCAATTGAAGAGGTGCAGTGGCCTGCCTCGTTACAGCAGCTCATGTTGG
GATATTTGTTCAACCAGCCAATTGAAGGTGTGCAGTGGCCTGCCTCGTTA
CAGCAACTTACATTCGGGTATGCGTTCAACCAGCCAATTGAAGGGATGCA
GTGGCCTGCCTCTTTGCAGCAACTTACATTCGGGTATGCGTTCAACCAGC
CAATTGAAGAAGTGGACTGGCTTGCTTCCTTGGAGAAGATCACGTTCGGG
TATGCGTTCAACCAGCCAATTGAAGGGGTGGAGTGGCCTACTTTGCTGCA
GCAGCTGGCATTCGGGAGTTTGTTCAACCAAAACATCGAGGAGGTGGAGT
GGCCTGCCTCGTTACAGAAGATCGCGTTCGGGTTTGTATTCAATCAGCCA
ATTGGAGAAGTGAAGTGGCCTGCCTCGCTGCAGCAGATCACGTTCGGGTA
TGGGTTCAACCAGCCAATTGAAGAGGTGGCATGGCCTGCCTCGCTGCAGC
ACCTGACATTCGGGAACGATTTTAACCAGTCCATTACAAGAATGGAGTGG
CCTCCTTTGCTGCTGCAGCTTGAGTTTGGGCGCAATTTCAATCAGCGCAT
TGAGGGGATGGGCTGGCCTTATTTACTGCAGCAACTCGCGTTCGGGTACG
ATTTCAACAAGCCCATCGAGCATGTGGTGTTTCCTGCCTCGCTGGAGAAG
CTCAGTTTCGGGGGGGCGTTCAACCAGCCCATTGACAGGGTGGAGTGGCC
TGCCTCGCTGCAGCAGCTTACGTTCGGGTATTCGTTCGACAGGTCAATTC
AAGGAGTGAAGTGGCCCGTCTCCTTACAGCAGCTCACGTTCGGGTGTTTT
TTCAATCAGCCTATTGAGAGGGTGGCGTTGCCTGTCTCGCTACAACAGCT
GACGTTCGGGTATTTCTTCAACCGGTCAATTGAAAACGTGAACTGGCCTC
TCTCGTTACAAAAGGTCACGTTCGGGGTTTCGTTCGAGAAGCCTATTGGA
GCGACGGAATGGCCTGCTTCGCTTCAGCAGCTAGAGTTCGGGCACAATTT
CAACCAGCCTATTGAACTGGCGGTGTGGCCTGTTTCGCTGCAGCGCCTCG
AGTTTGGGCACAGTTTTAACCAGTGCATTGAGGGAGTGAAGTGGCCTCCT
TCGCTGCAGCAGCTCGAGTTTGGCTTTCTTTTCAACCAGCCCGTTGAAGC
GGTACAGTGGCCGGCCTTGTTGCAGCAGCTGAAGTTCGGACACTATTTCA
ACCAGCCCATAGAGCGGGCGATATGGCCTGCCTCGCTACAGCAGATCGAG
TTCGGGCACTATTTCAACCAGCCAGTTGAAGCTGTCAACTGGCCTTCTTC
GCTAGAGCAACTCATGTTCGGGGAGGGTTTCAATCAGCCCGTTGAGCGCG
TGGAGTGGCCGGCCTCGCTGAAGAAGCTCACGTTTGGAGTGGCTTCAACC
AAAATGTTGACGAGTTGGTAGGCCAACATTGCTGCAACAGCTGAGTTCAG
AGATGCCGTGTATGTACAGGACGAATTTTGACAAATTTATCGCTTCCCGT
ATTCCTGTAGTATTGTATTCTGTGCACACATGTGCTGAGGAAGTTCATCA
TCTAGCTTTTGCGAAAATCAAACATCAAACATGAAAATTTCCAAGTCTCA
TCAATACCGCCCTATCGTTGTTACCCACGCATCGACCCTATTCATTTCTA
ACGAGACATGTCGGCAAATCTCTGGGTCGACAGAGTAAAGAGACGGGTTT
TTAACCGTGAACATTGTCAAGTATAGTGTTGAGAAACAAAAAGAAGGTTA
CTTGCTTTGTTACCTTCCGAGTGTCAGCGAATGTACTGATGCCTACACTT
TAGCGATTCAGGTAAATCCAGCAATCTGGTACATTAAGTTGTCCATGTAG
CTGTCCATAGATTTAGGTACATATTACCGCCTTGCTTTGCCGCTTTGCGG
TCTCGTAGTTTGCTCCATGAACAACGTGCGAGAGGGTTCGGTAGCGTACT
TGGCGATGGGTGCGTGTGTGTAATTTACGTTGCTTTGGTAGTCATTCAAT
TCGAAAAAGATGGCATGAAATAAAGAAAAATACTCGGAGATGAATATACA
GCGGCCAACGCTTATACATATCACTTATCTTTGGATATATCTTACGGCAG
ATTGGCACACTGCAGGCATAGCGGAACTTCGAGGGTTTTGGGTCAGATGA
CACAATGCAGGTCTGGCTTAGCTGCGTATATCTCTTGGGTAGGAGTGAGC
ACTGCGAGATCAACATATATTTAGGCATGGATAATTTGGGGCAGAAAATT
GCAGTGCAGGTGATAATTTTTCATTGAGTATTAGATCATGGTGTTTATCG
TTGAGTTATATTTAAATTAGGTAGAGTTGAGGGGAAAATAGGCGGCCTCG
TAGCCACCCACCCTCTCACTCTGTTATGCCCAGCTCAACCCATGGCATTA
ACAAAAAAACCAACAACAACGTAATACCGTAATAATGCGCGGGTTATCCT
CTGAACAACGCGCTGCGCCGACTATTACGCAGCGGGAGAGCAAACTCTGT
ACACCACATGCTCAATTATTAGTCGGACGTCGTCGTGTAGCCTAACCAGC
GTTGAGTCGGATTAGTGCTGTATAACGAAAGGGGCTATGAGCGGGTTCTG
TTGTGTTTAGTATAATAATAAGAGTCTCCTTATGTACACAAAGTCAATCT
ATCTTGCACTGTCTGCAATCCAGCTGGCCTTGTTTTGTTGCGATCAGACG
TTGATATCAGGTGCGGGCACAATTGGTAAGACTGGTCATCGGGTCCCCGA
TAATCGGATATCGGGTTGGGGCACCCGATAGCTGATACACCAAAAAATAT
CGACCGTTTCTTTTGCCTGGTGTATCGAAGTAAAGGTGTTTCGATATATC
GGAATATGGGAAGGCACCTCTGCGCCTCAGCTGCAGAAATTAGAGTTAGT
CATACGAAGCTACTCGATAACGACCGTAGCAGCAGGTATCCGGGCTGTCG
GCTCTCTGCCTTTTTGCTGTCGGCGATTTAAGTTGCTTTTTGGCGACATA
ATTACAACGGTGGAGTCATCTGTGTTGAGCGCTAGTGTGATTATCGTAAA
AATGGTTGGGCTGAGTTTGGGATATGCGCTATTGAAGTGAGTCCGTTGGG
AAAGCGCGTTCGTTGGGACAGTGGCAGAGGCATCGTTGGCGTGTAGTGAC
ATTCGTATCTGTTAAGTTTGGGCTTTGTATGTATTTTTTCCTGTATCCGA
GTCTGCGTGGTAGCCCTCGTACGTATGTGGCAGCGCATAACATGACTGCA
TTATTAGCGGTTAAATGGTGTTGCACTTGCGCCCTGTTTGCGGTAAGCTT
TTGTGGTCGCGTGGTTTGTGGTTTCGGTTGTCGCCAACTGTTTCGTTGCG
CACAGCATGGTATGGTAATACAGTACTGCAATAACCGTGTTAACATGATA
TTGGTGAAATGGAGAACGAACTTCTTTTTGGAGAACGAGCCTGAAATCTA
TATTTTTTTTCACGCGACACGTTCTAGCGCGCTCATTTCGACGAGTTAGA
CTGTGTGCAGCGGCGCAAACAAACAACCTTGCTCATGGCAGAACAAAGAT
GATTGCTGTACGGTCACCGGTAGTCTCGGTGGCGAGCTACAGCAGATTGA
AAGGCTTGCCTGGGCTGCTGCAAGCAAGAGCACCGATTAAGAATATCCGC
GCCGAATGGATTAATCGGTGTTCCGCCCATTCTTGTCACTGCCATATATT
CCGAACCATGGATCGGATTCAGTCAGCTGAGGTATTGACGTCATCAAGGA
TCTGAGAGCTTTTGACTGGGCTGTCAACCAACCCAATCGGCCATGCTGGT
CGGAAACTACACCAGGCGGAAACATCGGTGGCATAAGCAGAAAAAGAAGG
AGCTGGTTCTCCAAAACAATTCCTTCTCCATTTCGCCGATATCATGTTAA
ACGCGGTTCTATTAGCTGCGCGTCTCTCATTTTCCGAATTCTCCCGTTCT
TTCAGAGACCAAACCGCAAAGAAGTGTGACCTGTGCTTCTTGTCCGTCTT
GTGGGGATGTATATTGGTCCGAGGCGGTCGGGTTCACAGATATACACATA
AGAGTAATCGGTTCGACAAATCGGTCTATTGGTGTCTCGGAACCAGAGAG
GGCGTTCATTGTGGTGCTTCCCAGTGCTGTCAATGGTATCTAGTGTGGCA
ATGTTAACGTAAGCTAGGATTATTAGGATCATGACGCATAAGTTACATGC
GTCCATCGGAGCACGACATAGTTGGTGTACCAGTAGTTTACCTGCCAAGG
GCAGCCCCATGTAATTCAGTCGATGCTCATCTTCATAATTCTCTTCATTA
CACAAGGTCTGCGAGACTGGGACCTAATCTAATCGTGTGTGTATCGATCA
AGCCTTGTATCACCCGAGCTCCCGGCAACGAATACGCTACCGGTATAAAT
CTAGTGCATTAGTTTAGGCACAAGGATGGCCAGAGTGTTATCTGGAGGTA
GACAGGATAAGGTGAGGGCAATTGCGGAGCTGGCTCCCAATATGTGAAAC
CAATAGTACAAAGTGGGAATTAAGATAGAGCTCTCTATATGTAGATATGT
ATATGCGAAGTATATTGATACTGTACCCGGTACTAAAGAAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig5846:1160..7001+

>mRNA_H-paniculata_contig5846.13451.1 ID=mRNA_H-paniculata_contig5846.13451.1|Name=mRNA_H-paniculata_contig5846.13451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4416bp|location=Sequence derived from alignment at H-paniculata_contig5846:1160..7001+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGGCGTACTGACCTCAAACGACTCGGGAAGCGGAGTAGTTCGTGC
CGATGGCTGGCGTACTGACCTCAAACGACTCGGGAAGCGGAGTAGTTCGT
GCCGGAAACTCAGAAAGAGAGAGAAAACGAGCCAGTCTGTGTTTGGACGC
ATTCAACGTTGCGCTTGCTGAGGCTTTCGTCGGGAAGAGATCGTTAATGT
CAACCAAGCACTTGCAGCTCGCATCGCTGCAATTCTGTGTAGCTTGCCGG
AGCGGTAGCACCTTGCTCGTGAAACTCACGAAAGAGACACCACGGAGACT
GTGGGTTCCATCTTCACGGGAATTTGCAGCTCCGAGGACTGCCAGCGGTA
CGCCGCGTACGGGTCGAGGTTTAATCATCCCAACGACGCGTGTGCCGCTG
TTGCGAGCACGCGGCTTGATCGTATCGCCGGAGGTAACTGATCGTCTGTA
CGACTTCATGTTTCGCGAGAACACTCTGTTCGTCAATCTTAGGCACTTGG
TATATGATCGAAGGTTCAGCACGTCCGTTGATTGTGTCACCGCGCTGCCT
CCTTCGCTGCAGCACCTCGAGTTCGGCAAACATTTCAACGAGTCCATTAT
GGGGGTGGAGTGGCCTGCCTCGCTGCAGCAACTCACATTTGGGTATTCGT
TCAACCAGTCAATTGAAGGGGTGAAGTGGTCTGCTTCGCTGCAGCAGATC
ACGTTCGGGTACTACTTCAATAAGCCAATTGAAGGGGTTGAGTGGCCTGT
CTCGTTACAGCAAGTTACATTCGGGTATTCGTTCAACCAGCCAATTGAAG
AGGTGCAGTGGCCTGCCTCGTTACAGCAGCTCATGTTGGGATATTTGTTC
AACCAGCCAATTGAAGGTGTGCAGTGGCCTGCCTCGTTACAGCAACTTAC
ATTCGGGTATGCGTTCAACCAGCCAATTGAAGGGATGCAGTGGCCTGCCT
CTTTGCAGCAACTTACATTCGGGTATGCGTTCAACCAGCCAATTGAAGAA
GTGGACTGGCTTGCTTCCTTGGAGAAGATCACGTTCGGGTATGCGTTCAA
CCAGCCAATTGAAGGGGTGGAGTGGCCTACTTTGCTGCAGCAGCTGGCAT
TCGGGAGTTTGTTCAACCAAAACATCGAGGAGGTGGAGTGGCCTGCCTCG
TTACAGAAGATCGCGTTCGGGTTTGTATTCAATCAGCCAATTGGAGAAGT
GAAGTGGCCTGCCTCGCTGCAGCAGATCACGTTCGGGTATGGGTTCAACC
AGCCAATTGAAGAGGTGGCATGGCCTGCCTCGCTGCAGCACCTGACATTC
GGGAACGATTTTAACCAGTCCATTACAAGAATGGAGTGGCCTCCTTTGCT
GCTGCAGCTTGAGTTTGGGCGCAATTTCAATCAGCGCATTGAGGGGATGG
GCTGGCCTTATTTACTGCAGCAACTCGCGTTCGGGTACGATTTCAACAAG
CCCATCGAGCATGTGGTGTTTCCTGCCTCGCTGGAGAAGCTCAGTTTCGG
GGGGGCGTTCAACCAGCCCATTGACAGGGTGGAGTGGCCTGCCTCGCTGC
AGCAGCTTACGTTCGGGTATTCGTTCGACAGGTCAATTCAAGGAGTGAAG
TGGCCCGTCTCCTTACAGCAGCTCACGTTCGGGTGTTTTTTCAATCAGCC
TATTGAGAGGGTGGCGTTGCCTGTCTCGCTACAACAGCTGACGTTCGGGT
ATTTCTTCAACCGGTCAATTGAAAACGTGAACTGGCCTCTCTCGTTACAA
AAGGTCACGTTCGGGGTTTCGTTCGAGAAGCCTATTGGAGCGACGGAATG
GCCTGCTTCGCTTCAGCAGCTAGAGTTCGGGCACAATTTCAACCAGCCTA
TTGAACTGGCGGTGTGGCCTGTTTCGCTGCAGCGCCTCGAGTTTGGGCAC
AGTTTTAACCAGTGCATTGAGGGAGTGAAGTGGCCTCCTTCGCTGCAGCA
GCTCGAGTTTGGCTTTCTTTTCAACCAGCCCGTTGAAGCGGTACAGTGGC
CGGCCTTGTTGCAGCAGCTGAAGTTCGGACACTATTTCAACCAGCCCATA
GAGCGGGCGATATGGCCTGCCTCGCTACAGCAGATCGAGTTCGGGCACTA
TTTCAACCAGCCAGTTGAAGCTGTCAACTGGCCTTCTTCGCTAGAGCAAC
TCATGTTCGGGGAGGGTTTCAATCAGCCCGTTGAGCGCGTGGAGTGGCCG
GCCTCGCTGAAGAAGCTCACGTTTGGAGTGGCTTCAACCAAAATGTTGAC
GAGTTGGTAGGAAACTCAGAAAGAGAGAGAAAACGAGCCAGTCTGTGTTT
GGACGCATTCAACGTTGCGCTTGCTGAGGCTTTCGTCGGGAAGAGATCGT
TAATGTCAACCAAGCACTTGCAGCTCGCATCGCTGCAATTCTGTGTAGCT
TGCCGGAGCGGTAGCACCTTGCTCGTGAAACTCACGAAAGAGACACCACG
GAGACTGTGGGTTCCATCTTCACGGGAATTTGCAGCTCCGAGGACTGCCA
GCGGTACGCCGCGTACGGGTCGAGGTTTAATCATCCCAACGACGCGTGTG
CCGCTGTTGCGAGCACGCGGCTTGATCGTATCGCCGGAGGTAACTGATCG
TCTGTACGACTTCATGTTTCGCGAGAACACTCTGTTCGTCAATCTTAGGC
ACTTGGTATATGATCGAAGGTTCAGCACGTCCGTTGATTGTGTCACCGCG
CTGCCTCCTTCGCTGCAGCACCTCGAGTTCGGCAAACATTTCAACGAGTC
CATTATGGGGGTGGAGTGGCCTGCCTCGCTGCAGCAACTCACATTTGGGT
ATTCGTTCAACCAGTCAATTGAAGGGGTGAAGTGGTCTGCTTCGCTGCAG
CAGATCACGTTCGGGTACTACTTCAATAAGCCAATTGAAGGGGTTGAGTG
GCCTGTCTCGTTACAGCAAGTTACATTCGGGTATTCGTTCAACCAGCCAA
TTGAAGAGGTGCAGTGGCCTGCCTCGTTACAGCAGCTCATGTTGGGATAT
TTGTTCAACCAGCCAATTGAAGGTGTGCAGTGGCCTGCCTCGTTACAGCA
ACTTACATTCGGGTATGCGTTCAACCAGCCAATTGAAGGGATGCAGTGGC
CTGCCTCTTTGCAGCAACTTACATTCGGGTATGCGTTCAACCAGCCAATT
GAAGAAGTGGACTGGCTTGCTTCCTTGGAGAAGATCACGTTCGGGTATGC
GTTCAACCAGCCAATTGAAGGGGTGGAGTGGCCTACTTTGCTGCAGCAGC
TGGCATTCGGGAGTTTGTTCAACCAAAACATCGAGGAGGTGGAGTGGCCT
GCCTCGTTACAGAAGATCGCGTTCGGGTTTGTATTCAATCAGCCAATTGG
AGAAGTGAAGTGGCCTGCCTCGCTGCAGCAGATCACGTTCGGGTATGGGT
TCAACCAGCCAATTGAAGAGGTGGCATGGCCTGCCTCGCTGCAGCACCTG
ACATTCGGGAACGATTTTAACCAGTCCATTACAAGAATGGAGTGGCCTCC
TTTGCTGCTGCAGCTTGAGTTTGGGCGCAATTTCAATCAGCGCATTGAGG
GGATGGGCTGGCCTTATTTACTGCAGCAACTCGCGTTCGGGTACGATTTC
AACAAGCCCATCGAGCATGTGGTGTTTCCTGCCTCGCTGGAGAAGCTCAG
TTTCGGGGGGGCGTTCAACCAGCCCATTGACAGGGTGGAGTGGCCTGCCT
CGCTGCAGCAGCTTACGTTCGGGTATTCGTTCGACAGGTCAATTCAAGGA
GTGAAGTGGCCCGTCTCCTTACAGCAGCTCACGTTCGGGTGTTTTTTCAA
TCAGCCTATTGAGAGGGTGGCGTTGCCTGTCTCGCTACAACAGCTGACGT
TCGGGTATTTCTTCAACCGGTCAATTGAAAACGTGAACTGGCCTCTCTCG
TTACAAAAGGTCACGTTCGGGGTTTCGTTCGAGAAGCCTATTGGAGCGAC
GGAATGGCCTGCTTCGCTTCAGCAGCTAGAGTTCGGGCACAATTTCAACC
AGCCTATTGAACTGGCGGTGTGGCCTGTTTCGCTGCAGCGCCTCGAGTTT
GGGCACAGTTTTAACCAGTGCATTGAGGGAGTGAAGTGGCCTCCTTCGCT
GCAGCAGCTCGAGTTTGGCTTTCTTTTCAACCAGCCCGTTGAAGCGGTAC
AGTGGCCGGCCTTGTTGCAGCAGCTGAAGTTCGGACACTATTTCAACCAG
CCCATAGAGCGGGCGATATGGCCTGCCTCGCTACAGCAGATCGAGTTCGG
GCACTATTTCAACCAGCCAGTTGAAGCTGTCAACTGGCCTTCTTCGCTAG
AGCAACTCATGTTCGGGGAGGGTTTCAATCAGCCCGTTGAGCGCGTGGAG
TGGCCGGCCTCGCTGAAGAAGCTCACGTTTGGAGTGGCTTCAACCAAAAT
GTTGACGAGTTGGTAG
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