prot_H-paniculata_contig5843.13449.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5843.13449.1
Unique Nameprot_H-paniculata_contig5843.13449.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length929
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5843.13449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 832..865
e-value: 9.3E-5
score: 20.4
coord: 199..233
e-value: 2.1E-5
score: 22.4
coord: 341..375
e-value: 4.6E-7
score: 27.6
coord: 412..445
e-value: 2.0E-8
score: 31.9
coord: 726..756
e-value: 7.8E-7
score: 26.9
coord: 586..620
e-value: 2.9E-6
score: 25.1
coord: 234..263
e-value: 4.8E-4
score: 18.1
coord: 131..163
e-value: 2.3E-5
score: 22.3
coord: 270..304
e-value: 8.3E-7
score: 26.8
coord: 691..724
e-value: 5.4E-6
score: 24.3
coord: 868..898
e-value: 7.9E-5
score: 20.6
coord: 551..585
e-value: 3.6E-8
score: 31.1
coord: 621..655
e-value: 7.1E-6
score: 23.9
coord: 481..515
e-value: 2.6E-5
score: 22.1
coord: 446..480
e-value: 3.8E-4
score: 18.4
coord: 762..793
e-value: 5.6E-7
score: 27.3
coord: 306..339
e-value: 4.6E-5
score: 21.3
coord: 516..550
e-value: 4.4E-7
score: 27.7
coord: 797..830
e-value: 3.4E-6
score: 24.9
coord: 164..198
e-value: 3.5E-7
score: 28.0
coord: 656..689
e-value: 1.5E-6
score: 26.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 759..806
e-value: 2.5E-11
score: 43.6
coord: 338..385
e-value: 2.3E-11
score: 43.7
coord: 409..455
e-value: 5.7E-9
score: 36.0
coord: 161..208
e-value: 3.2E-12
score: 46.4
coord: 267..314
e-value: 1.4E-10
score: 41.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 234..263
e-value: 6.3E-4
score: 19.8
coord: 131..159
e-value: 0.0014
score: 18.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 501..562
e-value: 3.2E-11
score: 43.1
coord: 676..737
e-value: 4.2E-9
score: 36.3
coord: 817..879
e-value: 1.1E-6
score: 28.6
coord: 637..667
e-value: 0.0011
score: 19.0
coord: 571..632
e-value: 7.1E-14
score: 51.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 514..548
score: 12.408
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 795..829
score: 10.72
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 9.46
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..404
score: 8.407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 724..758
score: 10.764
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 127..161
score: 11.257
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 549..583
score: 12.66
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 619..653
score: 11.707
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 409..443
score: 12.452
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 479..513
score: 10.786
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 10.063
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 444..478
score: 10.161
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 760..794
score: 11.378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 689..723
score: 10.907
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 654..688
score: 11.268
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 584..618
score: 12.025
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 866..900
score: 10.994
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 830..864
score: 10.15
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..302
score: 11.992
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 10.523
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 12.145
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 162..196
score: 12.485
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 76..210
e-value: 2.2E-30
score: 107.3
coord: 528..629
e-value: 5.3E-37
score: 128.9
coord: 737..843
e-value: 8.0E-34
score: 118.6
coord: 630..736
e-value: 3.2E-34
score: 119.8
coord: 405..527
e-value: 4.7E-33
score: 116.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 334..404
e-value: 5.5E-15
score: 57.3
coord: 859..921
e-value: 1.9E-5
score: 26.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 211..333
e-value: 6.6E-37
score: 129.7
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 231..351
coord: 469..647
coord: 108..260
coord: 780..911
coord: 628..789
coord: 586..751
coord: 337..471

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5843contigH-paniculata_contig5843:2039..4825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5843.13449.1mRNA_H-paniculata_contig5843.13449.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5843 705..5702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5843.13449.1 ID=prot_H-paniculata_contig5843.13449.1|Name=mRNA_H-paniculata_contig5843.13449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=929bp
MVVRCVVGVANVIIRRPFRAPHGPAGACPSQVSISSIAKEKSGLPVGSRQ
RPKGVMADGEGDRHGYGRQRWQPQGRWQKARMSPDMWTIHQSYMGRLKQA
GTLKNWGEARRVLKEALARDDARSAVNVYFYSAAISAAAKCGEWEAAVEV
LDFMRKEGVNPNVVSYNSAIKACGDSGQWERVLRLLTEMQTKGITPNVVS
YSSAIKACGDGCQWEQALSLLTDMQGAGIPPNVVSYNSAINACGVSHQWE
QALALLRKMQGENSASPDVVSYNSTIKACGDAGQWGHALALLAEMRRENI
VPDVASYNSAIKACGVGNEWEQAVSLLREMKRNSVLTPNVVSYNSAISAC
GDGGQWQQALALLREMPMEGISPDVVSYSSAIKACGDGCQWEQALTLFRE
IQNSLTVVDVKCYSSAIKACGDGGQWDKALALFREMQMEGIRPDVVSYSL
AIKACGGGGQREQALSLLEDMYRQDIAPDVVCYGMAIKACGDGGHWEQAL
SLLSDMRINGVAPNVVAYSSAIRSCREGGQWQEALSLFREMTREGVAPNV
VAYNSAIKACGDGRQWEQALSLLREMQREGIPPNVVSYSSAIQACGICGQ
WQQALSMLEKMQRKGIAPNVVSYSSAIKACGDCGQWERALALFAKMARED
IAPNVVSYSSAIKACGDGGEWEQALSLLREMQTKGIVQDVISYNSAIKAC
GDGGQWRHALSLLTEMRRENIALDVVSYNSAINACGDGGQWEKALSLLRE
MQTSHTVTPDVVSYNSVINACGSSNQWEQALSLLREMKTKHIAQDAISYN
SAIKACGDGGQWKHALSLLAEMQRENIAVDEVSYNSAIAACGDGGQWGQA
LSLLREMQTSHILAPDVVSYNSAITACGKGGESREALAILRELHRKGVTA
RYPSTYNTTILALRDGARSCKRTFAAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf