mRNA_H-paniculata_contig5840.13445.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5840.13445.1
Unique NamemRNA_H-paniculata_contig5840.13445.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: A0A6H5KMP8_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP8_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.300e-38
Identity = 152/305 (49.84%), Postives = 176/305 (57.70%), Query Frame = 2 
Query:  212 MSRPPSVAQFLKRAGLSKRPRPKTEKRRHQQQKIHSVPHSQPEHSTKPSTIDGSSTTTSEGNPPKNTPAHHLKKEAQG----DV-VDDQIAALERELEXXXXXXXXXXXXXXXTDSSGEDREGAISGDAICGRINK---------QGYKLVSPLDSEKIEPLPRHLLPQPGCGVSK--KQAKKRSRVVRPDEGGRGVGGGLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGKAHVELLQATMTRQGKRVPGAQTGTRS 1078
            M RPP+++Q LKRAGL+KR RP         + + + P    + + K   +DG                    +   G    DV VDDQIAALEREL+                D S  D E +IS                   +  KLVSPL++EKIEPLP HLLP+PGCGV K  K+ KK S  V       G   GL SAV ELLANYEARSSERVPFYCRVCKFQG +LE LE+HK E LH  XXXXXXXXXXXXXXXXXXXXXXXXXXX  GKAH+E LQ+ M+RQGK VPG + G  S
Sbjct:    1 MFRPPTMSQLLKRAGLAKRSRPAG-------RGVDATPSPANQSNNKRQRVDGXXXXXXXXXXXXXXXXXXXSRSENGASAKDVTVDDQIAALERELKG--------------ADVSSSDAESSISSXXXXXXXXXXXXXXXERGRATKLVSPLEAEKIEPLPAHLLPRPGCGVHKDNKKKKKPSAAVGTTALP-GPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAHLEKLQSMMSRQGKWVPGGRGGPGS 283
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: D7FWN0_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN0_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.630e-32
Identity = 162/356 (45.51%), Postives = 187/356 (52.53%), Query Frame = 2 
Query:  212 MSRPPSVAQFLKRAGLSKRPRPKTEKRRHQQQKIHSVPHSQPEHSTKPSTIDGSSTTTSE--------------GNPPKNTPAHHLKKEAQGDVVDDQIAALERELEXXXXXXXXXXXXXXXTDSSGEDREGAISGDAI--------CGRINKQGYKLVSPLDSEKIEPLPRHLLPQPGCGVSKKQAKKRSRVVRPDE--GGRGVGG---GLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLHQEXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGKAHVELLQATMTRQGKRVPGAQTGT---RSTN----RDGAGGTSYPPQYALGGARGTGRGGRGGAGG 1177
            MS PP+++Q LKRAGL+KRPRP         + + + P +  +   K   +D                      G     T A  +        VDDQIAALEREL+                + S  D E                 GR   +  KLVSPL+ EKIEPLP HLLP+PGCGV K    K+     P    G   + G   GL SAV ELLANYEARSSERVPFYCRVCKFQG +LE LE+HK E LH  XXXXXXXXXXXXXXXXXXXXXXXXXXX      +E LQ+TM+RQGK VPG   G    RS N    R+  GG  +    A G A G GRG  GG GG
Sbjct:    1 MSGPPTMSQLLKRAGLAKRPRPAG-------RGVDATPSTASQSKRKRPRVDXXXXXXXXXXXXXXXXXXXXXXGRSENGTSAKDV-------AVDDQIAALERELKG--------------ANDSSSDAEXXXXXXXXXXXXXXRGAGRERGRVAKLVSPLEVEKIEPLPAHLLPRPGCGVHK---DKKXXXXXPSAAVGTTALPGPSQGLDSAVKELLANYEARSSERVPFYCRVCKFQGDSLEALEKHKEEPLHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKLQSTMSRQGKWVPGGWGGPGSERSANGYSGRENGGGR-WRGSDARGWAAGRGRGRDGGRGG 324
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: A0A835Z659_9STRA (C2H2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z659_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.610e-11
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:  761 GLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLHQE 907
            GL  AV ELLANYEA+S+ER+P+YCRVCKFQG ++E+L  H+   LH E
Sbjct:    2 GLEGAVNELLANYEAKSAERIPYYCRVCKFQGASVEDLAAHRQTQLHTE 50
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: A0A4D9D0V7_9STRA (C2H2-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0V7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.590e-11
Identity = 54/144 (37.50%), Postives = 67/144 (46.53%), Query Frame = 2 
Query:  596 INKQGYKLVSPLDSEK-IEPLPRHLLPQPGCG----------VSKKQAKKRSRVVRPD--------EGGRGV----------------------GGGLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLHQ 904
            I K G  L S L  E  I PLP HLLP P C            S  ++ +R R+ R +        EG  G                       G GLA  V ELL+NY+  SSER PFYCR+C+FQG++LE+L  HK   LH+
Sbjct:   72 IEKGGAVLKSRLAKEAAIPPLPPHLLPLPECKGKGGSRVPLPASDGRSGRRKRLTRKEKIASDRMQEGNGGAQRPGDPAGSLPPLQASSSASSAGAGLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELHR 215
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: A0A812U600_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U600_SYMMI)

HSP 1 Score: 69.3 bits (168), Expect = 2.960e-10
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 2 
Query:  638 EKIEPLPRHLLPQPGCGV----------SKKQAKKRSRVVRPDEGGRGVGGGLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLH 901
            ++I+ LPR  LP P CG+           KK  KK+S +      G+    GL   V ELL +Y   S E+ PFYCRVC+F G +L +LE+HK   LH
Sbjct:    1 DRIQSLPRQYLPDPKCGMPRKGSCGVLKEKKPKKKKSELAADPLAGQV--NGLEKTVNELLRHYVPASLEKKPFYCRVCRFTGTDLGDLEKHKASELH 96
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: I2CRP9_NANGC (C2h2 zinc finger protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRP9_NANGC)

HSP 1 Score: 65.9 bits (159), Expect = 1.010e-9
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 2 
Query:  761 GLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLHQ 904
            GLA  V ELL+NY+  SSER PFYCR+C+FQG++LE+L  HK   LH+
Sbjct:    2 GLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELHR 49
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: W7TIZ9_9STRA (C2h2 zinc finger n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIZ9_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.040e-9
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 2 
Query:  755 GGGLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLHQ 904
            G GLA  V ELL+NY+  SSER PFYCR+C+FQG++LE+L  HK   LH+
Sbjct:   31 GAGLAQTVAELLSNYQPASSERRPFYCRICRFQGQSLEDLAHHKKGELHR 80
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BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Match: B7FRV3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRV3_PHATC)

HSP 1 Score: 57.0 bits (136), Expect = 3.080e-5
Identity = 46/157 (29.30%), Postives = 70/157 (44.59%), Query Frame = 2 
Query:  446 DVVDDQIAALERELEXXXXXXXXXXXXXXXTDSSGEDREGAISGDAICGRINKQGYKLVSPLDSEKIEPLPRHLLPQPGC----GVSKKQAKKRSRVVRPDEG-GRGVGGGLASAVGELLANYEARSSERVPFYCRVCKFQGKNLEELEEHKLELLH 901
            D +D++I  LE EL                   + +D  G +    +C          +S +  ++IEPLP +LLP        G+ +  A +R    + ++   + V  GL +AV E+L  Y  RSSER+PFYCRVC  Q  + +    HK    H
Sbjct:   47 DDIDEEIRRLEAELANESDEDEHDSSDVETNSETEDDSRGTV----LC----------LSSVQKDRIEPLPSNLLPSNRKRSLKGIDRVNASERDDADQSNKKKSKLVSSGLEAAVKEVLDGYVPRSSERLPFYCRVCAQQMSDEDSFTAHKETEFH 189
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5840.13445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KMP8_9PHAE5.300e-3849.84C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FWN0_ECTSI1.630e-3245.51C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A835Z659_9STRA2.610e-1163.27C2H2-type domain-containing protein (Fragment) n=1... [more]
A0A4D9D0V7_9STRA7.590e-1137.50C2H2-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A812U600_SYMMI2.960e-1040.82Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
I2CRP9_NANGC1.010e-960.42C2h2 zinc finger protein (Fragment) n=1 Tax=Nannoc... [more]
W7TIZ9_9STRA1.040e-960.00C2h2 zinc finger n=1 Tax=Nannochloropsis gaditana ... [more]
B7FRV3_PHATC3.080e-529.30Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5840contigH-paniculata_contig5840:6821..12076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-06_001270.1
Exons3
Model size1937
Cds size1056
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5840.13445.1prot_H-paniculata_contig5840.13445.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5840 7032..11406 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930635.56503-UTR-H-paniculata_contig5840:6820..70311622930635.56503-UTR-H-paniculata_contig5840:6820..7031Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5840 6821..7031 +
1691481382.9872942-UTR-H-paniculata_contig5840:6820..70311691481382.9872942-UTR-H-paniculata_contig5840:6820..7031Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5840 6821..7031 +
1622930635.7053852-UTR-H-paniculata_contig5840:11406..120761622930635.7053852-UTR-H-paniculata_contig5840:11406..12076Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5840 11407..12076 +
1691481383.031792-UTR-H-paniculata_contig5840:11406..120761691481383.031792-UTR-H-paniculata_contig5840:11406..12076Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5840 11407..12076 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930635.584544-CDS-H-paniculata_contig5840:7031..76811622930635.584544-CDS-H-paniculata_contig5840:7031..7681Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5840 7032..7681 +
1691481383.0020666-CDS-H-paniculata_contig5840:7031..76811691481383.0020666-CDS-H-paniculata_contig5840:7031..7681Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5840 7032..7681 +
1622930635.6052408-CDS-H-paniculata_contig5840:9431..95521622930635.6052408-CDS-H-paniculata_contig5840:9431..9552Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5840 9432..9552 +
1691481383.0118124-CDS-H-paniculata_contig5840:9431..95521691481383.0118124-CDS-H-paniculata_contig5840:9431..9552Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5840 9432..9552 +
1622930635.627432-CDS-H-paniculata_contig5840:11121..114061622930635.627432-CDS-H-paniculata_contig5840:11121..11406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5840 11122..11406 +
1691481383.0217838-CDS-H-paniculata_contig5840:11121..114061691481383.0217838-CDS-H-paniculata_contig5840:11121..11406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5840 11122..11406 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5840.13445.1

>prot_H-paniculata_contig5840.13445.1 ID=prot_H-paniculata_contig5840.13445.1|Name=mRNA_H-paniculata_contig5840.13445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MSRPPSVAQFLKRAGLSKRPRPKTEKRRHQQQKIHSVPHSQPEHSTKPST
IDGSSTTTSEGNPPKNTPAHHLKKEAQGDVVDDQIAALERELEQNNSDDG
SSSSTDDDTDSSGEDREGAISGDAICGRINKQGYKLVSPLDSEKIEPLPR
HLLPQPGCGVSKKQAKKRSRVVRPDEGGRGVGGGLASAVGELLANYEARS
SERVPFYCRVCKFQGKNLEELEEHKLELLHQEAAKKERKISRCTLCKKQF
TSPPQLQEHLAGKAHVELLQATMTRQGKRVPGAQTGTRSTNRDGAGGTSY
PPQYALGGARGTGRGGRGGAGGFRGRGGWRGGRGRGGQAIRGRGGAGRGW
S*
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mRNA from alignment at H-paniculata_contig5840:6821..12076+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5840.13445.1 ID=mRNA_H-paniculata_contig5840.13445.1|Name=mRNA_H-paniculata_contig5840.13445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5256bp|location=Sequence derived from alignment at H-paniculata_contig5840:6821..12076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTATAATCCAAGCGCAATTTTGTTGGTTATACCAGTGCCGCTTGCTCGCT
GCACGCTGTATAGGAATGTGTTGATATGTTGTTCTACTCTAAGACCAACG
GGATTTTAGTAAAAATATATCTAATGTGGTAGGGAAAAAAACTGCTGATC
ACGACGACATTGCTGCTGGCTAGGTGCGGTCATTCAGTCTTGTACCCAAA
GTTTTGTTGCCATGTCTAGACCTCCTTCTGTGGCGCAGTTTCTTAAACGC
GCAGGACTATCAAAACGTCCTAGGCCAAAGACAGAAAAACGACGACATCA
ACAGCAAAAAATACACTCTGTACCGCATAGCCAACCCGAACACAGCACCA
AACCATCTACGATCGATGGCAGCAGCACCACTACCTCTGAGGGAAACCCC
CCCAAAAACACTCCCGCCCACCACCTAAAAAAAGAAGCACAAGGCGACGT
CGTGGATGATCAAATCGCAGCCCTTGAGCGAGAGCTGGAACAAAACAACA
GCGACGATGGCAGCAGCAGCAGTACTGACGATGACACCGATTCTTCAGGA
GAAGATAGGGAAGGAGCGATCTCCGGAGATGCAATATGCGGTAGGATCAA
CAAACAGGGTTACAAGCTGGTGTCCCCGTTGGATTCAGAGAAGATCGAGC
CGTTGCCGCGGCACTTGCTTCCACAGCCTGGGTGCGGTGTGTCCAAAAAG
CAGGCGAAAAAACGATCAAGAGTTGTTCGGCCGGATGAAGGGGGGAGAGG
GGTAGGGGGGGGCTTGGCGAGTGCGGTTGGGGAGCTGCTGGCGAACTACG
AAGCGCGGTCTTCCGAGAGAGTGCCATTTTACTGCAGGGTGTGCAAGTTT
CAAGGCAAAAAGTGAGGCTTTTAGTGAGTCTTCCTTCGATTAGTAAGTGT
GAAGATGTCCGTCGTGCCACCAGAACAACCAGTGCCGCCACGTTAATTGC
GCCACACGAGTCCGGGCTGTGATGTTAACCGGTGGCGGGCAAGCTCCAGT
AATACAGCATCGGCCCGCTTATAAGATTCGCAGTTCCAAGAAAATGAGAC
CAAGATATTGCTAGTCTTCTCCGGACCAAGAAATTGGGCTCAAATGTTGG
CCCCCCACTAATTCCTATATTAAAAAGTAAGAAACAGCATGATTCTCGCC
CAAAGTAGGTTTTGAGGCTGAGCCCGATTTTCAGCTGCTCATGAGCGAGC
CTTTACTACATTGTACTGTGATGGGACACCACGTGAGATTTCCCGGTGCT
AATTCTATTTCGGCCAATACGTACATTGTCGTGGCTTCGCCTTTTGTCGA
TGATGCGGATCTTGAGAGAACCCGAAGAGGTGAAACCGCTAGTTCGTAAG
CTCGTCGTGCAAACTACCCCGCATATCATACATCATGCAAACACTGTCGA
TAGAACTGAGGACACGATGAATAACCGAGACCCGGGTGACCCTATTCGTA
TCATTGATTCGCAGACGGACCCCACCACAGGAGCTTCGGTGTAGTACCTG
AGAGTACAAGTCTACACAGTCGGTTGATCATATTTGTAAGAAACATGTCG
GTGAGTTGGCGAGTTTGAACTGCAATTAAAGCGACTCGGTTCTGCCTGTC
ACGTGAATATGATACAAACACGCGTATCGCAAGTACCACCCCCCCACACC
ATAAATAGCTCCCAACTCTAGTGTCACCTGATTTGAATTAAATCTTAAGA
TGAGTGATACTGCATTGATTACCTTTACATACCGTAGATTGTAAAACTTA
CTAAAGTGCGGGGTAACTGTTCTGACCGCTATCCTGACGGCTCTCTTCTT
GTCCATATCGCCCCCCCCCCCCCCCCCTTCACCCCACTAATCTTTCAATT
GACCATTTTCAGTGTTATTATTTCCTTCTGTTGATCGGTGAGGGAGGCGC
ATCGGTCGACAGGCTGACAGTGCGATAGCTCCGTATCGTTGGCACTGCCT
GACCGCGAAGCGGATGTCTTTTCCCATTTATATACATGTCAATTATTTTT
ATTTTCTATCGTCGTTATCTTTCGTGGTCGTTGGATCTACATCTTCAATT
GTCGCTCCGGTTAAGATCCCACGGACGTTATCGCATCCGCGCAATAACTC
ACAACTCCGTCGGATTCGTTGGTGCAGGAGTAATTCGCATTTGTCAATCC
GATGACGGTCGAGCCACGGCTACGCCTCTGCAGTCCGTATTTTCATTTTC
ATGAGAAGGCCTGCATTAATGCGTATCGGCTCGCTGCGCTTGTAATGAAT
GTAATAGCCACGATGGCTTGGAAGATCTTGTTTTCGAAAGAAGGTACTCG
GGTAAAGATTTGGAGCACTCCTTCGAAATGACGCCTCATCACAGGGATGA
TGATGATTGTGAAAAAAAAAACAGCCATAGATAAGGAAAGCTTAACTGAG
ATTGGTTACCACCCGCTCCATAAGGTCAGTATGGAAAGGACGAAAAAAAA
ATAGGATATAAGTAACACCCTACCTCTGCATACAGAATGGTGATCGGCCG
CTTGACAAACGAGCATCTGGAGGTAGTGTTGGTGATTGACGAGTCAAATA
TTCGGTATGTCTGTTGTGGCGTTTTTTGTCATGTCCCTACTTTATTGTTT
GCGCTTACTAGCCTGGAGGAACTCGAGGAGCACAAGCTAGAGCTGCTGCA
CCAAGAGGCCGCGAAAAAGGAGCGTAAGATTAGCCGGTGCACTCTTTGCA
AGAAACAGTTCACCAGCCCGCCACAGCTACAAGTGAGTTGAGTTGATGCG
ACGTTTTCGTCATATTACTGTATGACACTCGCCCTGTTTTTAGATACAAA
ACGGTCATCTTGCTTTTTTTTTTTTTTCTTTCCTTCACCTTTTTTTCCGC
TAGATATCTGGCATATATTTGTCGTTGTTTTTGTCTGCTTGTGTGTGTGT
GTTCCTTGTTTTCATTGCTTGTGCTGAAAAATAATCAAAAACTATCTGTG
CCGAACATACGCTCTGTTTTGATTGAGCGGCGAAACTGTTCAATATAAGT
CAGTGAGGTAGGCCTGGAGTACCACAGGCTGTGCACCATGTATGTTATAC
CTGGTGTGTGTTTGTGATTCCACACAGAAGATACACTGACGAGGGGATCT
CGGGCGTTTCAGCTTGAATCACTCAACTTGTGTCTAGGTAGTCAGAGCTA
TCCTTCGAGATTCAACAATATGTGTCATAATCCTACATTTCTTGCTCGTC
GTATTACATCGGTATTATGCTCTTCGAACAAGTAGTTGACCGTTCAAGTA
CGAATCGTCTACCCTAATGCCCCCCAAAATATGTGGGATAAATGAAATTA
TGGTATGTTCATATAGGTGAAGTATTCAAATGCGATTCTTTGGATGATGA
CACAAATGAGGCTATTATTTTCGCGTTCGAAGGCGCCGATGCGCGATCGA
TGGGTGTATCCACGTCCGACTCATGTTGATATGTGACCGAGCAACATGGG
TGCACATTTAGCTTGACTCTTGTATTTTCTGAGAATTATTCGCTGCATCT
AAAACTTGTACGTATGACCACCTCTGGATTTCTTCGAGTTCCAGGATTGT
GCGGGTTACCTTTCGTGAAGCAACACTCGCGTCGAAACAGCAGGGAACAG
CTCGAGGAAAAAAGCCGGACCTGGAATATACAAGTGGTTCCCAGCTGGGT
TTATGAACCCCTTCTTAACAAGCCCGAGCCGCTCTAGCGAATGACCCCAA
CTACCGTTTTGTTCATTTTTCTGTCTGAGCCTTTTTTCTCTTTTCTTTCG
TTCCAAAACATAATCCGATTTCTCATCCCCGTGATCAGCGTGTAGAGATT
CCCATAACACAAAACTGAAAGACATGCAAATTCATACCATAATTCTTGTC
AGTTCGTATGCGCTGAGTATGGGATACGTGCCGTTTTAAGTGTATAAACA
TGAAGTTCGTGTATATACCAGACCAGCGGCATTGTGTGTTTTATGATGCA
CCCTTCGATACGCCAAGAGCTATACCGTCCTACTTCCCCATGTAGATGAG
ATTGTGTATTGTCTTTTCCAGGAGGCAAACACTGACCTTTTCGATGTATT
TATCCTGCACATGGCAATCAGCACATGAATTACAGACATGCAGCCACGTT
CAAGCAGAAATACGCGTGTGAGGGACCGGGCTCAATAGACTCGCGCATTC
AAAGGCCTCCCTCAAAACCCGAGTAAATAGCATCAATAAATGCCCCAATT
GTCAGATACGTCGTATTGTCCCTCCTGGAGTTTCGTTACATTTTTTAACT
CAATGCTGATACATAACACACATGTAAATATTTTTAATACCCACAACACA
GGAACACCTCGCTGGGAAAGCCCACGTAGAGTTATTACAGGCAACCATGA
CCCGACAGGGGAAACGGGTACCTGGTGCTCAAACGGGCACGCGGAGTACT
AATCGTGATGGTGCAGGAGGAACCAGCTATCCACCACAGTATGCTTTGGG
CGGCGCACGGGGCACCGGACGAGGGGGCAGAGGCGGTGCTGGTGGTTTTA
GGGGACGAGGGGGGTGGAGGGGAGGGAGGGGACGGGGAGGACAAGCAATA
CGGGGGAGGGGGGGTGCAGGGCGAGGCTGGAGTTGATGAACAGGACGGTA
CGGTGGTCGTGGTGTGCCACCGAGGCTGAGTTTGCGTTTGCTATTTAAGT
CGCTGTGGTGGTGGATTGCTGGATATGACAACGGCTATTGCAGGAGCGTT
CGATTTTTTGGGCGGGGGCGCGACAAGTCTGGCCATTTTTTTTTTTCTTT
TTGTGCTCGATCGCAGGCAGCACAGTATTCGTCAAACTTGTTTGTTGCCA
TTCCTAAGGTTGAGTCTTTGTGTCGTTGATGGTGTTGTGTGCAAGGCGTG
AACAGTCCCACGCAGCAAGAACCGGAATGCTCCTTTGCTGGTTTTCCATC
ATGACCGATTTCTTTCTGTCGAGCGGACAATCGGACACGGGATTCCGCGT
TGGTGCTGTCGAACACCCGCCCGCAGCTACGTACATACCGGCAGCACCCG
CCCCGATTCCTTTGCGCGCCATCTCAAATCTGTCGGTCAAAAGGACGTGT
TTCATTGGAGGTCGTGGTGCCGATTCGAAAACATGCAGCGGGAAATGGTT
GGATCGTTTCGCCGTAAGATGATGTAGTAGAACTCCATGCTGTTGACTGT
CATATAAGATTATTTTGCTGATTCTGTTCGAGCCAGTGGGTATCCTGAAT
AACTAAATCTCCAGTCACATTGCGCAGTTTCGACGGTTTTCATGTGCAGT
TCGGGA
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Coding sequence (CDS) from alignment at H-paniculata_contig5840:6821..12076+

>mRNA_H-paniculata_contig5840.13445.1 ID=mRNA_H-paniculata_contig5840.13445.1|Name=mRNA_H-paniculata_contig5840.13445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2112bp|location=Sequence derived from alignment at H-paniculata_contig5840:6821..12076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTAGACCTCCTTCTGTGGCGCAGTTTCTTAAACGCGCAGGACTATC
AAAACGTCCTAGGCCAAAGACAGAAAAACGACGACATCAACAGCAAAAAA
TACACTCTGTACCGCATAGCCAACCCGAACACAGCACCAAACCATCTACG
ATCGATGGCAGCAGCACCACTACCTCTGAGGGAAACCCCCCCAAAAACAC
TCCCGCCCACCACCTAAAAAAAGAAGCACAAGGCGACGTCGTGGATGATC
AAATCGCAGCCCTTGAGCGAGAGCTGGAACAAAACAACAGCGACGATGGC
AGCAGCAGCAGTACTGACGATGACACCGATTCTTCAGGAGAAGATAGGGA
AGGAGCGATCTCCGGAGATGCAATATGCGGTAGGATCAACAAACAGGGTT
ACAAGCTGGTGTCCCCGTTGGATTCAGAGAAGATCGAGCCGTTGCCGCGG
CACTTGCTTCCACAGCCTGGGTGCGGTGTGTCCAAAAAGCAGGCGAAAAA
ACGATCAAGAGTTGTTCGGCCGGATGAAGGGGGGAGAGGGGTAGGGGGGG
GCTTGGCGAGTGCGGTTGGGGAGCTGCTGGCGAACTACGAAGCGCGGTCT
TCCGAGAGAGTGCCATTTTACTGCAGGGTGTGCAAGTTTCAAGGCAAAAA
ATGTCTAGACCTCCTTCTGTGGCGCAGTTTCTTAAACGCGCAGGACTATC
AAAACGTCCTAGGCCAAAGACAGAAAAACGACGACATCAACAGCAAAAAA
TACACTCTGTACCGCATAGCCAACCCGAACACAGCACCAAACCATCTACG
ATCGATGGCAGCAGCACCACTACCTCTGAGGGAAACCCCCCCAAAAACAC
TCCCGCCCACCACCTAAAAAAAGAAGCACAAGGCGACGTCGTGGATGATC
AAATCGCAGCCCTTGAGCGAGAGCTGGAACAAAACAACAGCGACGATGGC
AGCAGCAGCAGTACTGACGATGACACCGATTCTTCAGGAGAAGATAGGGA
AGGAGCGATCTCCGGAGATGCAATATGCGGTAGGATCAACAAACAGGGTT
ACAAGCTGGTGTCCCCGTTGGATTCAGAGAAGATCGAGCCGTTGCCGCGG
CACTTGCTTCCACAGCCTGGGTGCGGTGTGTCCAAAAAGCAGGCGAAAAA
ACGATCAAGAGTTGTTCGGCCGGATGAAGGGGGGAGAGGGGTAGGGGGGG
GCTTGGCGAGTGCGGTTGGGGAGCTGCTGGCGAACTACGAAGCGCGGTCT
TCCGAGAGAGTGCCATTTTACTGCAGGGTGTGCAAGTTTCAAGGCAAAAA
CCTGGAGGAACTCGAGGAGCACAAGCTAGAGCTGCTGCACCAAGAGGCCG
CGAAAAAGGAGCGTAAGATTAGCCGGTGCACTCTTTGCAAGAAACAGTTC
ACCAGCCCGCCACAGCTACAACCTGGAGGAACTCGAGGAGCACAAGCTAG
AGCTGCTGCACCAAGAGGCCGCGAAAAAGGAGCGTAAGATTAGCCGGTGC
ACTCTTTGCAAGAAACAGTTCACCAGCCCGCCACAGCTACAAGAACACCT
CGCTGGGAAAGCCCACGTAGAGTTATTACAGGCAACCATGACCCGACAGG
GGAAACGGGTACCTGGTGCTCAAACGGGCACGCGGAGTACTAATCGTGAT
GGTGCAGGAGGAACCAGCTATCCACCACAGTATGCTTTGGGCGGCGCACG
GGGCACCGGACGAGGGGGCAGAGGCGGTGCTGGTGGTTTTAGGGGACGAG
GGGGGTGGAGGGGAGGGAGGGGACGGGGAGGACAAGCAATACGGGGGAGG
GGGGGTGCAGGGCGAGGCTGGAGTTGAGAACACCTCGCTGGGAAAGCCCA
CGTAGAGTTATTACAGGCAACCATGACCCGACAGGGGAAACGGGTACCTG
GTGCTCAAACGGGCACGCGGAGTACTAATCGTGATGGTGCAGGAGGAACC
AGCTATCCACCACAGTATGCTTTGGGCGGCGCACGGGGCACCGGACGAGG
GGGCAGAGGCGGTGCTGGTGGTTTTAGGGGACGAGGGGGGTGGAGGGGAG
GGAGGGGACGGGGAGGACAAGCAATACGGGGGAGGGGGGGTGCAGGGCGA
GGCTGGAGTTGA
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