prot_H-paniculata_contig5833.13437.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5833.13437.1
Unique Nameprot_H-paniculata_contig5833.13437.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1009
Homology
BLAST of mRNA_H-paniculata_contig5833.13437.1 vs. uniprot
Match: D8LTI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI9_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.160e-45
Identity = 292/849 (34.39%), Postives = 368/849 (43.35%), Query Frame = 0
Query:  125 GLMGWAMWPLWGTLDALRWAGASVNEVAVAPVMRYAGPGAIAGNLWGRFMAYTPQRARDLGRIFKNVIMNAAGLFGSAPGAEVLRTASLATESLAMAASSPAGRQFVVESATALVKAAEAMDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQATVMAAEFTANVCHAMEMEYLAGMENLRFAANAPEASAAPPKKILSNECDTYRARADP---LGVPHAP-AGGRRDEPSSSAFPNSVDGASDQYALGLEQGRRALVPEVSIGEQETTRPRPQQGGQVGTDASREQSTAAALASSRLSAAGSGSLQQPDHVLRAEVSTEADARRGQAHSGVSSFEGSADGAATIGRVEDASSTTAKRYPRAGS-------RINMTP-ITQADLNRNVGVPLRSPLFAVS-CAPASPPSPSTAASSPPRSVATTTTMSNSCVAAKPFIGRITTSTAIGRSDVRAELAGRSLPSTPIGRRRHHFSGPEVAAAGGFSVEGGTASGGGDRDVGXRARSSSDVMIGTRGDSGSGARGGGDFFAVRQQNVSEAGMVMGGLDEMLADANSGREGGRVGSHEVMSETGVRDAAHPAPADYRRDGRHLLPRFSMESFASVLRGMPLALEQQLDAPTQSTLQSVLHRAAGRF--REGGGRGGGGVYDQPSGRQGSTDGGLDSGSDGREL-GDGGTIRDEVGVARAPTPAHSRGEGWIQILSSILFLFFAIEGVRHHL---FGAAASKHATRSTAAPSSMPHSPSPLGGGIGGYPSGSEVETTRYRAVFLPQTCRDPATGVTMTIWATPSGPCVSPEQESEDGAW------GGPGSPGCAASFRLCSAGEI 948
            GL+ WA+WPLWGT+DAL+WAG +VNEVAVAPV+R A P  +AG++     A+TPQRARDL R+  N  +NAAGL  +  G E+LR++  AT SL+ A                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +AT++AAEFT NV HA+EME++AG+   R AA A  A+                A ADP    G  HAP AGG   EP+         G +D        G  A  PE +             GG V                   +A G  +L       RAE +       G   S      GS      +G  E    + +     +G+       R  +TP I QADL  +   PLR+ L A    AP   P   T+                                             RS PS+P G   H                  T  G   +  G R R+S+    G  G              VR     EA  + GG     A    G E    G+  V+S       A P   +Y RDG   LPRF+ E F SVLRG PL LE QL+AP + ++   + RAA      EG           PS R    D G   G+  +E  G     R+  GV+    P+ +    W Q   + L LFFA +G+R+     F    + H   S   P   P  P P      GY + ++   + +   FLP  C+DP +G TM +W  PSGPC+SP   S  GA       GG G P C+ASFRLCSA E+
Sbjct:  147 GLLDWALWPLWGTIDALKWAGGTVNEVAVAPVIRMASPWGLAGSVLTTVKAFTPQRARDLARVVGNFGLNAAGLVQTPAGVELLRSSGRATGSLSTAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATILAAEFTVNVEHALEMEHMAGIAR-RAAAKAAAAAXT--------------ADADPGLAAGDAHAPRAGGDGTEPNL--------GLADDVV-----GPAAREPEAN-------------GGPV------------------CAAGGEQTLDDLVREARAERAHRESGGTGGPRSAGHERGGSDGSVLAVGGPEGCYPSRSGEGRPSGNDPTDADHRAGVTPVIRQADLAGDT--PLRTFLDAAGGTAPVVRPPGDTS---------------------------------------------RSAPSSPGGWHAHAAXXXXXXXXXXXXXXXXTLGG---QCAGNRERASTVTGAGDDG--------------VRGGTAEEAYGISGGAG-FTAGCRGGGEND--GTESVLS------GARPPAVEYERDGNARLPRFTSEHFESVLRGQPLGLELQLEAPNEDSVDDTVARAASSRVPLEG--------APPPSPR---VDAGNAPGNAVQETTGQDAPPREGKGVS---VPSTAEARSWKQAGFACLLLFFAGDGLRYRWKAGFRGEKTVHENISMPPPPPTPGPPKP------GYLA-TDGRNSVFGVTFLPPACKDPVSGATMAVWVAPSGPCLSPASVSGGGAGRTEGLLGGGGEPACSASFRLCSAAEV 842          
BLAST of mRNA_H-paniculata_contig5833.13437.1 vs. uniprot
Match: A0A835ZC84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC84_9STRA)

HSP 1 Score: 124 bits (311), Expect = 8.670e-26
Identity = 133/309 (43.04%), Postives = 167/309 (54.05%), Query Frame = 0
Query:   25 FSTVVSRGPTATPDTDQVSAALSSIGVAARTAGLSSTP--SPRQHAAVAAVPTINHPAPSNPTGAWATPTFDPPDPPAADNIAPPASSPNDGSGAGVGGVVDGLMGWAMWPLWGTLDALRWAGASVNEVAVAPVMRYAGPGAIAGNLWGRFMAYTPQRARDLGRIFKNVIMNAAGLFGSAPGAEV---LRTASLAT-------------ESLAMAASSPAGRQFVVESATALVKAAEAMDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQATVMAAEFTANVCHAMEMEY 315
            F+ V++ GPTATPD++ +SAAL+S+   A    +   P  SPRQ  A AAV   +                      A+D  A  +SS N G          G++GWA+ P+W T+DAL+WAG +V + AVAPV+RYA P   A  ++      TPQRA DL RIF N   NA GL  +  G +V   LR A+  T             ++LA   S+PAGRQ V++ A   VK AEA+ T E                  XXXXXXXXXXXXXXXXXXXXXXXXX     VMAAEFTANV HA+EME+
Sbjct:   29 FTEVLALGPTATPDSNDISAALASLAPDA----VEPPPFHSPRQAGADAAVAVGDT---------------------ASDGEA--SSSRNTGDDHAGDPFRSGVLGWALSPMWMTIDALKWAGQTVTDKAVAPVVRYASPAGWAAYIFDAVKNLTPQRACDLARIFGNATFNAVGLLHTPSGRQVTACLRAAASFTRAGRTRAAAARVVDALATTVSAPAGRQLVIDGAATFVKVAEALSTLEAKDAMQQCAVAAARFFDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAAEFTANVVHALEMEH 310          
BLAST of mRNA_H-paniculata_contig5833.13437.1 vs. uniprot
Match: A0A836CDX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX8_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 4.400e-11
Identity = 124/262 (47.33%), Postives = 144/262 (54.96%), Query Frame = 0
Query:  134 LWGTLDALRWAGASVNEVAVAPVMRYAGPGAIAGNLWGRFMAYTPQRARDLGRIFKNVIMNAAGLFGSAPGAEVLRTASLATESLAMAASSPAGRQFVVESATALVKAAEAMDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQATVMAAEFTANVCHAMEMEYLAGMENLRFAANAPEASAAPPKKILSNECDTYRARADPLGVPHAPAGG-RRD------------EPSSSAFPNSVDGASD 382
            +W  LDAL+WAG +VNE AVAPV R A P   A  ++      TPQRARDL RIF N  +   GL  +  G +V+     A ++ A   SS                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ATVMAAEFTANV HA+EME+L   ++L   A A  A+A     +   E     ARA   G+  APA   RRD                SA P SV G+S+
Sbjct:    1 MWFGLDALKWAGQTVNERAVAPVARLASPAGWASYIFEGVKNLTPQRARDLARIFGNATIRGVGLTTTPAGQKVVAAGLQAVDAFATTVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVMAAEFTANVVHALEMEHLQHAKHLPREAAAVIAAAP----VDXXEAAAEYARAANGGMRSAPATPLRRDGGGXXXXXXXXXXXXQSASPGSVTGSSE 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5833.13437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTI9_ECTSI1.160e-4534.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC84_9STRA8.670e-2643.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDX8_9STRA4.400e-1147.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5833contigH-paniculata_contig5833:5427..11826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5833.13437.1mRNA_H-paniculata_contig5833.13437.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5833 4884..12070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5833.13437.1 ID=prot_H-paniculata_contig5833.13437.1|Name=mRNA_H-paniculata_contig5833.13437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1009bp
MDQGKGSSGTSRSQGDAARNSARQFSTVVSRGPTATPDTDQVSAALSSIG
VAARTAGLSSTPSPRQHAAVAAVPTINHPAPSNPTGAWATPTFDPPDPPA
ADNIAPPASSPNDGSGAGVGGVVDGLMGWAMWPLWGTLDALRWAGASVNE
VAVAPVMRYAGPGAIAGNLWGRFMAYTPQRARDLGRIFKNVIMNAAGLFG
SAPGAEVLRTASLATESLAMAASSPAGRQFVVESATALVKAAEAMDTAEF
KNFVQQAAVVVARGVDFAGTRFAKIFLQDAANVVVQLVELANSSQATVMA
AEFTANVCHAMEMEYLAGMENLRFAANAPEASAAPPKKILSNECDTYRAR
ADPLGVPHAPAGGRRDEPSSSAFPNSVDGASDQYALGLEQGRRALVPEVS
IGEQETTRPRPQQGGQVGTDASREQSTAAALASSRLSAAGSGSLQQPDHV
LRAEVSTEADARRGQAHSGVSSFEGSADGAATIGRVEDASSTTAKRYPRA
GSRINMTPITQADLNRNVGVPLRSPLFAVSCAPASPPSPSTAASSPPRSV
ATTTTMSNSCVAAKPFIGRITTSTAIGRSDVRAELAGRSLPSTPIGRRRH
HFSGPEVAAAGGFSVEGGTASGGGDRDVGGRARSSSDVMIGTRGDSGSGA
RGGGDFFAVRQQNVSEAGMVMGGLDEMLADANSGREGGRVGSHEVMSETG
VRDAAHPAPADYRRDGRHLLPRFSMESFASVLRGMPLALEQQLDAPTQST
LQSVLHRAAGRFREGGGRGGGGVYDQPSGRQGSTDGGLDSGSDGRELGDG
GTIRDEVGVARAPTPAHSRGEGWIQILSSILFLFFAIEGVRHHLFGAAAS
KHATRSTAAPSSMPHSPSPLGGGIGGYPSGSEVETTRYRAVFLPQTCRDP
ATGVTMTIWATPSGPCVSPEQESEDGAWGGPGSPGCAASFRLCSAGEIWG
MVEGIADGWGSSTSDKDDNDKGVAHKERAKDSVDDVSLAELSGRGARKTA
RLQNGDEM*
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