prot_H-paniculata_contig5815.13419.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5815.13419.1
Unique Nameprot_H-paniculata_contig5815.13419.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length628
Homology
BLAST of mRNA_H-paniculata_contig5815.13419.1 vs. uniprot
Match: A0A6H5KJ76_9PHAE (DUF1981 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ76_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 4.540e-59
Identity = 213/529 (40.26%), Postives = 271/529 (51.23%), Query Frame = 0
Query:  103 DARVDTVRMAGCLAAALRLQRLLYGIARLHLRALGERQTRLLLDGLSSGLNYARAFQGRRDLRMALFHAGQLVSRNSAGSVELPHLLEQESEALCYTFAICFRLLGVRWPSGAPAVTATTAAASATTSQIANSTNTAGAVGTDKGSMTTAYHSSETAVPAGSASGTL--WPDPRAFDPEASAVLKSAASIGQMGGGSQHSXXXXXXXXXXXXRSDATTAAAK--RSAHGSKTAGVSGGAGSRVTSIPSGPILVVDDLLAWSGEGDEGPAGDGFGATEGNMDGTGQGRTAWDGTALAHEYLRAEXXXXXXXXXXXXXEIQRGRLEEEDELWTLNEEPLAPSS--TSSLPPMSPSRTPTRGSSAILFGWDNQTGVPQSPSAYRNASSQQPWSRAPHAYDSNNSDHNQQQPFHAAVPRTPNSHNPQQQXXXXXQAIGILGRLGGAAACLRRNEP-DMMASKESEIRHLTPPLLLLLRGLLLLDPNE-FASEASWVFPSLADLVVVRNLEVRATVRELFSTCINPLLNFPATA 623
            D   D  R A  LAAALRLQRLLYG+ARLHL  LGE Q R LL GLS G+ YAR FQ +  LR +LF AG LV R+  G  ELPHLLEQESE L + FA+ FRLL VRWP  +P+ +               +           G  T+   + + A   GS   +L  WP+ R+F+ EA  V+ +              XXXXXXXXX         A     R+  G    GV  G+        +GP+LVVDDLL WSG+GDEGP             G+G G   WDGT LA E+LR E             E+QR  LE  D +W+  ++  A S+  +SS  P SPS+   RG  ++           +SPS +   SS    S +P A  S  S  +QQ    A+ PR+  S   ++      +        GG     ++ EP +++AS E+E+RHLTP +LLLLRGLLLL P E F  EA W+ P LADLVVVR+LEVRA VREL    + PL+  P  A
Sbjct:  832 DVEFDGPRAAALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLSEGVRYARDFQAQHALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAVAFRLLDVRWPRSSPSASGXXXXXXXXXXXXXETI----------GGGTSRSSAGDGAFAGGSDEVSLMPWPEHRSFELEAVVVVPNDXXXXXXXXXXXXXXXXXXXXXXSRPPRPGLPADGDVHRAVGGKARGGVHSGSA-------AGPMLVVDDLLEWSGDGDEGP-------------GSG-GAAGWDGTTLALEFLRREGGNILVRYFEADGEVQRASLE--DHMWSSADDTAAASAVPSSSFAPPSPSQH--RGGFSV-----------ESPSRHTVTSS----SFSPTA--STGSRAHQQ----ASTPRSMGSGGTRRPPGAAPRPPAA----GGLGPQHQQREPANLVASTEAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLRR-MTPLIGVPGEA 1299          
BLAST of mRNA_H-paniculata_contig5815.13419.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 9.200e-26
Identity = 114/288 (39.58%), Postives = 147/288 (51.04%), Query Frame = 0
Query:  346 SGPILVVDDLLAWSGEGDEGPAGDGFGATEGNMDGTGQGRTAWDGTALAHEYLRAEXXXXXXXXXXXXXEIQRGRLEEEDELWTLNEEPLAPSS-----TSSLPPMSPSRTPTRGSSAILFGWDNQTGVPQSPSAYRNASSQQPWSRAPHAYDSNNSDHNQQQPFHAAVPRTPNSHNPQQQXXXXXQAIGILGRL---GGAAACLRRNEP-DMMASKESEIRHLTPPLLLLLRGLLLLDPNE-FASEASWVFPSLADLVVVRNLEVRATVRELFSTCINPLLNFPATA 623
            +GP+LVVDDLL WSG+GD+GP G               G   WDGTALA E+LR E             E+QR  LE  D +W+  ++           +SS  P SPS+   RG  +            +SPS +   SS    S +P A  S  S  +QQ    A+ PR+  S           + +G   RL   GG     ++ EP +++AS E+E+RHLT  +LLLLRGLLLL P E F  EA W+ P LADLVVVR+LEVRA VREL  T + PL+  P  A
Sbjct: 2096 AGPMLVVDDLLEWSGDGDDGPGGG--------------GAAGWDGTALALEFLRREGGNLLVRYFVADGEVQRASLE--DHMWSSADDXXXXXXXXXXXSSSFAPPSPSQH--RGGFSA-----------ESPSRHTVTSS----SFSPTA--STGSRAHQQ----ASTPRSVGS-------GGARRPLGAAPRLPAAGGLGPQHQQREPVNLVASAEAEVRHLTSAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELL-TRMAPLIGVPGEA 2336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5815.13419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ76_9PHAE4.540e-5940.26DUF1981 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LFA1_ECTSI9.200e-2639.58BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 624..627

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5815contigH-paniculata_contig5815:6268..9167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5815.13419.1mRNA_H-paniculata_contig5815.13419.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5815 4890..9183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5815.13419.1 ID=prot_H-paniculata_contig5815.13419.1|Name=mRNA_H-paniculata_contig5815.13419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=628bp
MEATELSLGGYFRGGDEGESGERGERSRQSVTATVFEPSSMATTTTVTSQ
GNNGTNVIRDGRQQEQHQEEDPLKHGANETQHHGQQLSKRDTGQTLSSDT
DADARVDTVRMAGCLAAALRLQRLLYGIARLHLRALGERQTRLLLDGLSS
GLNYARAFQGRRDLRMALFHAGQLVSRNSAGSVELPHLLEQESEALCYTF
AICFRLLGVRWPSGAPAVTATTAAASATTSQIANSTNTAGAVGTDKGSMT
TAYHSSETAVPAGSASGTLWPDPRAFDPEASAVLKSAASIGQMGGGSQHS
NHNQNRRRMRPPRSDATTAAAKRSAHGSKTAGVSGGAGSRVTSIPSGPIL
VVDDLLAWSGEGDEGPAGDGFGATEGNMDGTGQGRTAWDGTALAHEYLRA
EGSALVNRYFQADGEIQRGRLEEEDELWTLNEEPLAPSSTSSLPPMSPSR
TPTRGSSAILFGWDNQTGVPQSPSAYRNASSQQPWSRAPHAYDSNNSDHN
QQQPFHAAVPRTPNSHNPQQQHQHQHQAIGILGRLGGAAACLRRNEPDMM
ASKESEIRHLTPPLLLLLRGLLLLDPNEFASEASWVFPSLADLVVVRNLE
VRATVRELFSTCINPLLNFPATASDAT*
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