prot_H-paniculata_contig58117.13411.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig58117.13411.1
Unique Nameprot_H-paniculata_contig58117.13411.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 97.8 bits (242), Expect = 7.640e-22
Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    3 PTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDE 84
            PT+   G TP E WHG TP ++HL+VFGC  Y +    +R KLD K+  G+FLGY   S  Y +YNP  K + +SRN++FDE
Sbjct:  599 PTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A7S1T3E5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3E5_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 6.000e-20
Identity = 39/76 (51.32%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    9 GGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDE 84
            GG P     G    L  +RVFGC AYV     QRRKLDD+AW GVF+GY  +SP++ VYNP  +    SRN+ FDE
Sbjct:   16 GGVPFTLATGRRADLSSMRVFGCPAYVHVDKSQRRKLDDRAWKGVFVGYASESPAWLVYNPVTRRAVSSRNVVFDE 91          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA)

HSP 1 Score: 90.9 bits (224), Expect = 2.080e-19
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    1 RAPTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEEDF 87
            + PT+     TP E W G  P++ HL++FGC AY     QQR+KLDD+    +F+GYDK S +Y +YNP  K + +SR++ FDE D+
Sbjct:  686 QCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADY 772          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 90.1 bits (222), Expect = 3.860e-19
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    1 RAPTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDE 84
            R+P + H+  TP E W G+ PKL H+R+FGC A+    S +RRKLD +A   +FLGY  +S +Y +YNP N+ V LSR++RF E
Sbjct:  181 RSPCKSHSS-TPEEIWSGKKPKLSHIRIFGCKAFAHVPSDRRRKLDKRATVCIFLGYSLESKAYRLYNPANRRVFLSRDVRFSE 263          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: G4TYM6_SERID (Integrase catalytic domain-containing protein n=3 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TYM6_SERID)

HSP 1 Score: 87.8 bits (216), Expect = 2.460e-18
Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    5 RPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEEDF 87
            R HNG TP E WHG+ P +DHLRVFGC AYV     QR  LD      +F+GY  D P +  +NP+ + +  S +  FDE  F
Sbjct:  639 RVHNGKTPYEHWHGKAPSVDHLRVFGCLAYVFVPKSQRNALDSHTEKCIFVGYPSDRPGWVFWNPQTRKIIHSDSAAFDERVF 721          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A699Q9B6_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699Q9B6_TANCI)

HSP 1 Score: 82.0 bits (201), Expect = 2.580e-18
Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   11 TPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEE 85
            TP E W+G  P + H RVFG  AYV   SQ+R KLDD+    VF+GYDK S  Y +YNP  + V +S ++ FDEE
Sbjct:    9 TPQEAWNGLKPTVSHPRVFGSIAYVRISSQRRLKLDDRCEKHVFVGYDKQSKGYKLYNPVTRKVVVSIDVEFDEE 83          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: G4TZX2_SERID (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TZX2_SERID)

HSP 1 Score: 87.4 bits (215), Expect = 3.120e-18
Identity = 38/83 (45.78%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    5 RPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEEDF 87
            R HNG TP E WHG+ P +DHLRVFGC AYV     QR  LD      +F+GY  D P +  +NP+ + +  S +  FDE  F
Sbjct:  122 RVHNGKTPYEHWHGKAPSVDHLRVFGCLAYVFIPKSQRNALDSHTEKCIFVGYPSDRPGWVFWNPQTRKIIHSDSAVFDERVF 204          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A4Y2LAF7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LAF7_ARAVE)

HSP 1 Score: 86.3 bits (212), Expect = 4.630e-18
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 RAPTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDE 84
            R PT+P    TP   W    P L H+RVFGC AY   Q Q+RRKLDDKA  G+FLGYD  S  Y +Y  +NK + +SR ++F+E
Sbjct:  149 RLPTKPKRK-TPYVLWANRKPDLSHIRVFGCKAYACIQKQKRRKLDDKAVEGIFLGYDYRSKGYRIYLGDNK-IMISRTVKFNE 230          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A2U1QJ52_ARTAN (Uncharacterized protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QJ52_ARTAN)

HSP 1 Score: 87.0 bits (214), Expect = 4.640e-18
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 RAPTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEED 86
            R P++  +  TP E W+G  P + HLRVF   AYV   SQ+R KLDDK+   VF+GYDK S  Y +YNP    V +SR++ FDEE+
Sbjct:  406 RCPSKSLDNKTPQEAWNGMKPTVSHLRVFESIAYVHVPSQRRSKLDDKSEKHVFVGYDKQSKGYKLYNPITGKVVVSRDVEFDEEE 491          
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 85.9 bits (211), Expect = 1.180e-17
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    3 PTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRR-KLDDKAWAGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEE 85
            P+RP  G TP E W+G  P++DHLR+FGC A+VM   + R   L  +A  GVF+GYDK S  Y V+ P+  ++ +SRN+ F E+
Sbjct:  359 PSRPLGGKTPFELWYGTPPRIDHLRIFGCLAFVMLPDKAREHSLSARARVGVFIGYDKYSKGYRVHFPDTGALAISRNVDFHED 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig58117.13411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T355_CAJCA7.640e-2248.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A7S1T3E5_9CHLO6.000e-2051.32Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A068B703_GOSBA2.080e-1944.83Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A... [more]
A0A6H5FV69_9HEMI3.860e-1948.81Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
G4TYM6_SERID2.460e-1845.78Integrase catalytic domain-containing protein n=3 ... [more]
A0A699Q9B6_TANCI2.580e-1850.67Retrovirus-related Pol polyprotein from transposon... [more]
G4TZX2_SERID3.120e-1845.78Integrase catalytic domain-containing protein (Fra... [more]
A0A4Y2LAF7_ARAVE4.630e-1850.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A2U1QJ52_ARTAN4.640e-1848.84Uncharacterized protein n=1 Tax=Artemisia annua Ta... [more]
A0A177U095_9BASI1.180e-1746.43Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 1..86
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig58117contigH-paniculata_contig58117:492..752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig58117.13411.1mRNA_H-paniculata_contig58117.13411.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig58117 492..752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig58117.13411.1 ID=prot_H-paniculata_contig58117.13411.1|Name=mRNA_H-paniculata_contig58117.13411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
RAPTRPHNGGTPCEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKLDDKAW
AGVFLGYDKDSPSYCVYNPENKSVQLSRNLRFDEEDF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like